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The map label for this gene is ybgC [C]

Identifier: 83312314

GI number: 83312314

Start: 3482080

End: 3482661

Strand: Reverse

Name: ybgC [C]

Synonym: amb3215

Alternate gene names: 83312314

Gene position: 3482661-3482080 (Counterclockwise)

Preceding gene: 83312315

Following gene: 83312313

Centisome position: 70.11

GC content: 62.54

Gene sequence:

>582_bases
ATGAGGAGGGGGAATGATGGTGATGGCGACAGTCATCCCGACGACCAACGGGAGGAGGGATCTCATCCTGCTCCGCCATG
TCGGGGTCGGCATCATCGTTCCAGGCGGAGATCCCTCGCATGCGCTCGGGATGACAGGTTGGGCGGGAGGCTGGTTGCCG
TGAACGCCCATACCTTCCCCGTCCGCGTCTATTACGAGGACACCGATGCCGGCGGCATCGTGTACCACTCCAACTATCTG
AAATTCGCCGAGCGGGCGCGCACCGAAATGGTGCGCGAGCTGGGCATCAGCCAGCGGGCCATGCTGGAGGATGGTGAGGG
AACCGCCTTCGCGGTGCGCTCGGCCAATCTGGATTTTCGTCGCCCGGCCAAGCTGGACGATCTGCTGTCGGTGGAAACCC
AGGTGATTTCCATCGGCGGTGCCAGTATAGAACTGGACCAGCGAATCGTTCGGGTGGACGACGGAACTGAATTGGTGCAC
CTGGAGGTGCGCCTGGGCTATATCACCCTGTCGGGCAAGCCGGCCCGCATTCCGGCGCCGGTCAGGGATTTGTTCGCGAA
TCGGATCAGCGAAAGGCGGTAG

Upstream 100 bases:

>100_bases
ACGCCGCGTGGCCGCATGCTGTCGGCCTCCGGCTTCAAGCATATCGGCCTCAATCCCCCCAAGGATCTGCTGGTGCAGCT
CGACCTGCTGACCCGCATGG

Downstream 100 bases:

>100_bases
GTATTATGGATCCTTCTCAGGCAGTAGGGGCGGCCGGAGCGGCGGCGCAGATGGATTTGTCCATGTGGGCGCTGTTTCTG
CGCGCCGATATCATTGTCAA

Product: thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MRRGNDGDGDSHPDDQREEGSHPAPPCRGRHHRSRRRSLACARDDRLGGRLVAVNAHTFPVRVYYEDTDAGGIVYHSNYL
KFAERARTEMVRELGISQRAMLEDGEGTAFAVRSANLDFRRPAKLDDLLSVETQVISIGGASIELDQRIVRVDDGTELVH
LEVRLGYITLSGKPARIPAPVRDLFANRISERR

Sequences:

>Translated_193_residues
MRRGNDGDGDSHPDDQREEGSHPAPPCRGRHHRSRRRSLACARDDRLGGRLVAVNAHTFPVRVYYEDTDAGGIVYHSNYL
KFAERARTEMVRELGISQRAMLEDGEGTAFAVRSANLDFRRPAKLDDLLSVETQVISIGGASIELDQRIVRVDDGTELVH
LEVRLGYITLSGKPARIPAPVRDLFANRISERR
>Mature_193_residues
MRRGNDGDGDSHPDDQREEGSHPAPPCRGRHHRSRRRSLACARDDRLGGRLVAVNAHTFPVRVYYEDTDAGGIVYHSNYL
KFAERARTEMVRELGISQRAMLEDGEGTAFAVRSANLDFRRPAKLDDLLSVETQVISIGGASIELDQRIVRVDDGTELVH
LEVRLGYITLSGKPARIPAPVRDLFANRISERR

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=124, Percent_Identity=45.1612903225806, Blast_Score=107, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 21628; Mature: 21628

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRGNDGDGDSHPDDQREEGSHPAPPCRGRHHRSRRRSLACARDDRLGGRLVAVNAHTFP
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCEEE
VRVYYEDTDAGGIVYHSNYLKFAERARTEMVRELGISQRAMLEDGEGTAFAVRSANLDFR
EEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCC
RPAKLDDLLSVETQVISIGGASIELDQRIVRVDDGTELVHLEVRLGYITLSGKPARIPAP
CCCCHHHHHHHHEEEEEECCCEEEECCEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCH
VRDLFANRISERR
HHHHHHHHHHCCC
>Mature Secondary Structure
MRRGNDGDGDSHPDDQREEGSHPAPPCRGRHHRSRRRSLACARDDRLGGRLVAVNAHTFP
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCEEE
VRVYYEDTDAGGIVYHSNYLKFAERARTEMVRELGISQRAMLEDGEGTAFAVRSANLDFR
EEEEEECCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCC
RPAKLDDLLSVETQVISIGGASIELDQRIVRVDDGTELVHLEVRLGYITLSGKPARIPAP
CCCCHHHHHHHHEEEEEECCCEEEECCEEEEECCCCEEEEEEEEEEEEEECCCCCCCCCH
VRDLFANRISERR
HHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]