| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312300
Identifier: 83312300
GI number: 83312300
Start: 3469155
End: 3469997
Strand: Reverse
Name: 83312300
Synonym: amb3201
Alternate gene names: NA
Gene position: 3469997-3469155 (Counterclockwise)
Preceding gene: 83312303
Following gene: 83312299
Centisome position: 69.86
GC content: 62.28
Gene sequence:
>843_bases GTGCCGCCACCAATTTTGCGGATCGTACCGAGAGCCTTCTTGGTCGCGAGCGACCGCACGCAATTCGATCTCGAGGTGGC GCGGTCGGAATATGGCCGTTGCGGGACCCAAGCCCGGACGAGGGGGGCCTGTCCCCTGGATGGCCGCGTAATCAACACTT CGTTGCTCACTCCGGCGGACATGGCGGCGCGCAAGAGTGCCCTGTCCACCCTCAAGGCCTATGCCGCCGCCCTTTCCAAG GCCTGCGCGGCGACGCCGGGAGCCGACTTCGCGTCGGCCGTGACATCGCTTCAGCAGCAGGTGAATACGGTCGGAAGCGA TGTGGCGAAGATGACCGGTAAGGGCGGAAATCTGAAGGAGCTGGAGCAGGCATCCGGTCCCATCGCGATCCTGGTGGGGA CCATCGGCAAGATGGTCATCGAGCAGAAGCAGGCCGATGCCCTGATCGAAGCCATTCTGTCGGCGGAGCAACCCATAGGC CGCCTGGCAGACAACATGGATAAGGACATGGCAATCGTCCTGGCGGACATGGGCGATGGGGCGACCGGCCAATACGGTTT TGCCGTGGAAGCCTACAACGACCTGTTGCCGGCCAAGATGGCCGATCGGCAAGCCCTTCTGGCGATCGTGAAGGGTAAGG CCTCGGCGTATTACGAGTTGCGGACGATCCGCACCAGCTATTCCCAATCCATCGGCGGGTTCAAGGCCGCCGTGTCGGAA CTGGCAAGCTTTGCCCGATCCAAGCGCGATCCCAAGAAATATGCCGACGTGGTCGCCGCCGTGGATGTTTTCATCAGCCG GGCCGAGGACCTGAATAAAGCCATCGGGCAAGTCCGGAAATAG
Upstream 100 bases:
>100_bases ATGATCTGGCCCAATCGTGTAATTGCCGTCGCCATGGCGGCCGTCTTGGTGGGGTGTGCCCAACCTGACCAGTTCACATC CGACTTGGCGAAGTTTTCGA
Downstream 100 bases:
>100_bases CGCATGCGAATGATCTCGATCTGGGAGCGAAGAGGAGAGGGACATGGCAGACAAGGATATCGATGAGGTGGTCGCCGCTC TTTACGAGTGTTCCGGCCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 280; Mature: 279
Protein sequence:
>280_residues MPPPILRIVPRAFLVASDRTQFDLEVARSEYGRCGTQARTRGACPLDGRVINTSLLTPADMAARKSALSTLKAYAAALSK ACAATPGADFASAVTSLQQQVNTVGSDVAKMTGKGGNLKELEQASGPIAILVGTIGKMVIEQKQADALIEAILSAEQPIG RLADNMDKDMAIVLADMGDGATGQYGFAVEAYNDLLPAKMADRQALLAIVKGKASAYYELRTIRTSYSQSIGGFKAAVSE LASFARSKRDPKKYADVVAAVDVFISRAEDLNKAIGQVRK
Sequences:
>Translated_280_residues MPPPILRIVPRAFLVASDRTQFDLEVARSEYGRCGTQARTRGACPLDGRVINTSLLTPADMAARKSALSTLKAYAAALSK ACAATPGADFASAVTSLQQQVNTVGSDVAKMTGKGGNLKELEQASGPIAILVGTIGKMVIEQKQADALIEAILSAEQPIG RLADNMDKDMAIVLADMGDGATGQYGFAVEAYNDLLPAKMADRQALLAIVKGKASAYYELRTIRTSYSQSIGGFKAAVSE LASFARSKRDPKKYADVVAAVDVFISRAEDLNKAIGQVRK >Mature_279_residues PPPILRIVPRAFLVASDRTQFDLEVARSEYGRCGTQARTRGACPLDGRVINTSLLTPADMAARKSALSTLKAYAAALSKA CAATPGADFASAVTSLQQQVNTVGSDVAKMTGKGGNLKELEQASGPIAILVGTIGKMVIEQKQADALIEAILSAEQPIGR LADNMDKDMAIVLADMGDGATGQYGFAVEAYNDLLPAKMADRQALLAIVKGKASAYYELRTIRTSYSQSIGGFKAAVSEL ASFARSKRDPKKYADVVAAVDVFISRAEDLNKAIGQVRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29604; Mature: 29473
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPPILRIVPRAFLVASDRTQFDLEVARSEYGRCGTQARTRGACPLDGRVINTSLLTPAD CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEECCCCCCCHH MAARKSALSTLKAYAAALSKACAATPGADFASAVTSLQQQVNTVGSDVAKMTGKGGNLKE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LEQASGPIAILVGTIGKMVIEQKQADALIEAILSAEQPIGRLADNMDKDMAIVLADMGDG HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCC ATGQYGFAVEAYNDLLPAKMADRQALLAIVKGKASAYYELRTIRTSYSQSIGGFKAAVSE CCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LASFARSKRDPKKYADVVAAVDVFISRAEDLNKAIGQVRK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PPPILRIVPRAFLVASDRTQFDLEVARSEYGRCGTQARTRGACPLDGRVINTSLLTPAD CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHCCCCCCCCCEEECCCCCCCHH MAARKSALSTLKAYAAALSKACAATPGADFASAVTSLQQQVNTVGSDVAKMTGKGGNLKE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LEQASGPIAILVGTIGKMVIEQKQADALIEAILSAEQPIGRLADNMDKDMAIVLADMGDG HHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEEECCCC ATGQYGFAVEAYNDLLPAKMADRQALLAIVKGKASAYYELRTIRTSYSQSIGGFKAAVSE CCCCCCEEHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LASFARSKRDPKKYADVVAAVDVFISRAEDLNKAIGQVRK HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA