| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is pyk [H]
Identifier: 83312273
GI number: 83312273
Start: 3435376
End: 3436803
Strand: Reverse
Name: pyk [H]
Synonym: amb3174
Alternate gene names: 83312273
Gene position: 3436803-3435376 (Counterclockwise)
Preceding gene: 83312274
Following gene: 83312269
Centisome position: 69.19
GC content: 65.34
Gene sequence:
>1428_bases ATGAGACAGAAGCGCAATACTCGTATCGTCGCCACCCTGGGGCCTGCCAGTTCCAGCCCGGACCAGATCAGGGCGCTGTG GGAGGCCGGGGCGGACGTCTTTCGCCTCAATTTCAGCCATGGCAGTCATGCCGACCACCTGGAGCGGTTCAAGGAAATCC GCCGCCTGGAGGCCGAACTGGGCCGTCCCATCGCCATCCTTGCCGATTTGCAAGGTCCGAAGCTGCGTCTTGGAGTCTTC AAGGCGGGCAAGGTGGCTCTCAAACCAGGGCAGGCTTTCCGCCTCGACCTGTCGCGGGAACCGGGGGATATCAACCGCGC CCCGCTGCCTCACCCGGAAATCCTGTCGGCCCTGACGCCGGGTTCGGACCTTTTGCTGGATGACGGCAAGGTTCGGCTGC GGGTCGAATCCTGCGGGCCAGACTTTGCCGAAACCGTGGTGGTGGTGGCGGGTCCCTTGTCCGACCGCAAGGGCGTCAAT GTGCCCGACGCGGTGATCCCCCTGTCGGCCCTGACCGAGAAGGACCGCCGCGACCTTGCCTTCGCCCTGGAATTGGGCAT CGACTGGATCGCCCTGTCCTTCGTGCAACGGCCCGAGGATGTGGAGGAGGCCCGCGCCCTGATCGGCGACCGCGCCCGCA TTCTGTCCAAGTTGGAGAAGCCCTCCGCCATCGACCGCCTCGATGAGATCGTTGCTCTGTCCGACGCGGTGATGGTGGCG CGCGGCGATCTGGGCGTCGAATTGCCGCCCGAGGATGTGCCCGGCCTGCAAAAACGCATCATCCGCTCATGTCGCGCTGC CGGTAAGCCGGTGGTCGTTGCCACCCAGATGTTGGAATCCATGATAGAGGCGCCCACACCGACGCGGGCCGAAGCCTCCG ACGTGGCCACCGCCGTCTTCGCCGGTGCCGACGCGGTGATGCTCTCGGCGGAATCCGCCTCGGGCCGCTATCCCGTCGAA GCCGTCACCATGATGAGCCGCATCATCAGCCGGGTTGAGAGCGATCCCAACTATCTCGACGGTCTGGGCAGCGGTTGCGC CAAGCCAGAGGCCAACGACGCCGACGCCATCAGCGCGGCCGTCTGCCAGGTGACCGGCATCCTGTCTGTCGCCGCCATCG TCGCCTACACCACTTCGGGATTCACCACGCTGCGCATCGCCCGAGAGCGTCCGGCTTCCCCGATCCTCAGCTTGACCCCG AATGCGGCCACTGCGCGCCACGTTGCTTTGGCTTGGGGCGTCCATTCCGTCCACACCGAAGATGCCGCCAATGTGGAGGA CATGGTCGCCAAGGCGTCAGGCATCGCCACCAGAGAGGGTTTCACCGAGGGCGGCAAGCCACTGGTGATCATCGCAGGCA TGCCATTCGGAACTGCCGGTTCAACCAACCTGTTGCGCATCGTGCGCGTGCCCAGGGCTTCACTCTGA
Upstream 100 bases:
>100_bases GCTTTTTCCATGCCTTGGGCGATTCCGTGGTGACCGGCCCGACACTCACCAACGTCAACGATTTCCGCGCGATTTTGATC GCCGACAAGGACAGCACTCC
Downstream 100 bases:
>100_bases CCAAACGCAATGAAATTTGCGGCTCCTCCCGCCGCACTGACCCTGGTTCGGGTCAAACTAAGGGCTGCCCATGAAAATGG GTGGCCCTTTCTTCATGATT
Product: pyruvate kinase
Products: NA
Alternate protein names: PK [H]
Number of amino acids: Translated: 475; Mature: 475
Protein sequence:
>475_residues MRQKRNTRIVATLGPASSSPDQIRALWEAGADVFRLNFSHGSHADHLERFKEIRRLEAELGRPIAILADLQGPKLRLGVF KAGKVALKPGQAFRLDLSREPGDINRAPLPHPEILSALTPGSDLLLDDGKVRLRVESCGPDFAETVVVVAGPLSDRKGVN VPDAVIPLSALTEKDRRDLAFALELGIDWIALSFVQRPEDVEEARALIGDRARILSKLEKPSAIDRLDEIVALSDAVMVA RGDLGVELPPEDVPGLQKRIIRSCRAAGKPVVVATQMLESMIEAPTPTRAEASDVATAVFAGADAVMLSAESASGRYPVE AVTMMSRIISRVESDPNYLDGLGSGCAKPEANDADAISAAVCQVTGILSVAAIVAYTTSGFTTLRIARERPASPILSLTP NAATARHVALAWGVHSVHTEDAANVEDMVAKASGIATREGFTEGGKPLVIIAGMPFGTAGSTNLLRIVRVPRASL
Sequences:
>Translated_475_residues MRQKRNTRIVATLGPASSSPDQIRALWEAGADVFRLNFSHGSHADHLERFKEIRRLEAELGRPIAILADLQGPKLRLGVF KAGKVALKPGQAFRLDLSREPGDINRAPLPHPEILSALTPGSDLLLDDGKVRLRVESCGPDFAETVVVVAGPLSDRKGVN VPDAVIPLSALTEKDRRDLAFALELGIDWIALSFVQRPEDVEEARALIGDRARILSKLEKPSAIDRLDEIVALSDAVMVA RGDLGVELPPEDVPGLQKRIIRSCRAAGKPVVVATQMLESMIEAPTPTRAEASDVATAVFAGADAVMLSAESASGRYPVE AVTMMSRIISRVESDPNYLDGLGSGCAKPEANDADAISAAVCQVTGILSVAAIVAYTTSGFTTLRIARERPASPILSLTP NAATARHVALAWGVHSVHTEDAANVEDMVAKASGIATREGFTEGGKPLVIIAGMPFGTAGSTNLLRIVRVPRASL >Mature_475_residues MRQKRNTRIVATLGPASSSPDQIRALWEAGADVFRLNFSHGSHADHLERFKEIRRLEAELGRPIAILADLQGPKLRLGVF KAGKVALKPGQAFRLDLSREPGDINRAPLPHPEILSALTPGSDLLLDDGKVRLRVESCGPDFAETVVVVAGPLSDRKGVN VPDAVIPLSALTEKDRRDLAFALELGIDWIALSFVQRPEDVEEARALIGDRARILSKLEKPSAIDRLDEIVALSDAVMVA RGDLGVELPPEDVPGLQKRIIRSCRAAGKPVVVATQMLESMIEAPTPTRAEASDVATAVFAGADAVMLSAESASGRYPVE AVTMMSRIISRVESDPNYLDGLGSGCAKPEANDADAISAAVCQVTGILSVAAIVAYTTSGFTTLRIARERPASPILSLTP NAATARHVALAWGVHSVHTEDAANVEDMVAKASGIATREGFTEGGKPLVIIAGMPFGTAGSTNLLRIVRVPRASL
Specific function: Glycolysis; final step. [C]
COG id: COG0469
COG function: function code G; Pyruvate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pyruvate kinase family [H]
Homologues:
Organism=Homo sapiens, GI33286418, Length=495, Percent_Identity=39.1919191919192, Blast_Score=315, Evalue=4e-86, Organism=Homo sapiens, GI33286422, Length=491, Percent_Identity=38.4928716904277, Blast_Score=315, Evalue=5e-86, Organism=Homo sapiens, GI33286420, Length=491, Percent_Identity=38.4928716904277, Blast_Score=315, Evalue=5e-86, Organism=Homo sapiens, GI10835121, Length=495, Percent_Identity=37.979797979798, Blast_Score=291, Evalue=9e-79, Organism=Homo sapiens, GI32967597, Length=490, Percent_Identity=38.1632653061225, Blast_Score=290, Evalue=2e-78, Organism=Homo sapiens, GI310128732, Length=287, Percent_Identity=39.7212543554007, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI310128730, Length=287, Percent_Identity=39.7212543554007, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI310128736, Length=237, Percent_Identity=36.2869198312236, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI310128734, Length=237, Percent_Identity=36.2869198312236, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI310128738, Length=214, Percent_Identity=35.0467289719626, Blast_Score=132, Evalue=6e-31, Organism=Escherichia coli, GI1788160, Length=483, Percent_Identity=40.3726708074534, Blast_Score=312, Evalue=2e-86, Organism=Escherichia coli, GI1787965, Length=472, Percent_Identity=36.4406779661017, Blast_Score=291, Evalue=6e-80, Organism=Caenorhabditis elegans, GI17544584, Length=492, Percent_Identity=36.9918699186992, Blast_Score=297, Evalue=8e-81, Organism=Caenorhabditis elegans, GI71984413, Length=484, Percent_Identity=37.8099173553719, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI17506829, Length=484, Percent_Identity=37.8099173553719, Blast_Score=280, Evalue=1e-75, Organism=Caenorhabditis elegans, GI71984406, Length=484, Percent_Identity=37.8099173553719, Blast_Score=280, Evalue=2e-75, Organism=Caenorhabditis elegans, GI17506831, Length=484, Percent_Identity=37.8099173553719, Blast_Score=279, Evalue=2e-75, Organism=Saccharomyces cerevisiae, GI6324923, Length=487, Percent_Identity=34.7022587268994, Blast_Score=245, Evalue=9e-66, Organism=Saccharomyces cerevisiae, GI6319279, Length=486, Percent_Identity=34.156378600823, Blast_Score=243, Evalue=7e-65, Organism=Drosophila melanogaster, GI24648964, Length=490, Percent_Identity=37.1428571428571, Blast_Score=288, Evalue=8e-78, Organism=Drosophila melanogaster, GI28571814, Length=490, Percent_Identity=37.1428571428571, Blast_Score=287, Evalue=1e-77, Organism=Drosophila melanogaster, GI24648966, Length=408, Percent_Identity=35.7843137254902, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24581235, Length=486, Percent_Identity=32.0987654320988, Blast_Score=242, Evalue=3e-64, Organism=Drosophila melanogaster, GI24646914, Length=273, Percent_Identity=36.996336996337, Blast_Score=168, Evalue=9e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001697 - InterPro: IPR015813 - InterPro: IPR011037 - InterPro: IPR015794 - InterPro: IPR018209 - InterPro: IPR015793 - InterPro: IPR015795 - InterPro: IPR015806 [H]
Pfam domain/function: PF00224 PK; PF02887 PK_C [H]
EC number: =2.7.1.40 [H]
Molecular weight: Translated: 50454; Mature: 50454
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: PS00110 PYRUVATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQKRNTRIVATLGPASSSPDQIRALWEAGADVFRLNFSHGSHADHLERFKEIRRLEAEL CCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH GRPIAILADLQGPKLRLGVFKAGKVALKPGQAFRLDLSREPGDINRAPLPHPEILSALTP CCCEEEEEECCCCEEEEEEEECCCEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCC GSDLLLDDGKVRLRVESCGPDFAETVVVVAGPLSDRKGVNVPDAVIPLSALTEKDRRDLA CCCEEEECCEEEEEEECCCCCHHHEEEEEECCCCCCCCCCCCHHHHCHHHHHCCHHHHHE FALELGIDWIALSFVQRPEDVEEARALIGDRARILSKLEKPSAIDRLDEIVALSDAVMVA EHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE RGDLGVELPPEDVPGLQKRIIRSCRAAGKPVVVATQMLESMIEAPTPTRAEASDVATAVF ECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHH AGADAVMLSAESASGRYPVEAVTMMSRIISRVESDPNYLDGLGSGCAKPEANDADAISAA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHH VCQVTGILSVAAIVAYTTSGFTTLRIARERPASPILSLTPNAATARHVALAWGVHSVHTE HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCHHHHHHEECCHHHCCCC DAANVEDMVAKASGIATREGFTEGGKPLVIIAGMPFGTAGSTNLLRIVRVPRASL CCCCHHHHHHHHCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC >Mature Secondary Structure MRQKRNTRIVATLGPASSSPDQIRALWEAGADVFRLNFSHGSHADHLERFKEIRRLEAEL CCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH GRPIAILADLQGPKLRLGVFKAGKVALKPGQAFRLDLSREPGDINRAPLPHPEILSALTP CCCEEEEEECCCCEEEEEEEECCCEEECCCCEEEEECCCCCCCCCCCCCCCHHHHHHCCC GSDLLLDDGKVRLRVESCGPDFAETVVVVAGPLSDRKGVNVPDAVIPLSALTEKDRRDLA CCCEEEECCEEEEEEECCCCCHHHEEEEEECCCCCCCCCCCCHHHHCHHHHHCCHHHHHE FALELGIDWIALSFVQRPEDVEEARALIGDRARILSKLEKPSAIDRLDEIVALSDAVMVA EHHHHCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEE RGDLGVELPPEDVPGLQKRIIRSCRAAGKPVVVATQMLESMIEAPTPTRAEASDVATAVF ECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCHHHHHHHHH AGADAVMLSAESASGRYPVEAVTMMSRIISRVESDPNYLDGLGSGCAKPEANDADAISAA CCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHHHHHH VCQVTGILSVAAIVAYTTSGFTTLRIARERPASPILSLTPNAATARHVALAWGVHSVHTE HHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEECCCCCHHHHHHEECCHHHCCCC DAANVEDMVAKASGIATREGFTEGGKPLVIIAGMPFGTAGSTNLLRIVRVPRASL CCCCHHHHHHHHCCCHHHCCCCCCCCEEEEEECCCCCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA