| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is insK [C]
Identifier: 83312250
GI number: 83312250
Start: 3400538
End: 3401440
Strand: Reverse
Name: insK [C]
Synonym: amb3151
Alternate gene names: 83312250
Gene position: 3401440-3400538 (Counterclockwise)
Preceding gene: 83312251
Following gene: 83312249
Centisome position: 68.48
GC content: 65.12
Gene sequence:
>903_bases GTGACGCCCGCCGCCAGGCGGATCGTCGTCGCCCATGTCCGAGAATTGTTCGGACTGAGCGAGCGTCGGGCGTGTTTGAT TGTGGGGATTTCCCGGCGAGTGATGCGGTATCGGTCGTGTCGTCCCGACGACGCGCCGATCCGGGCGCGATTGCGCGAAC TGGCGGCAGAGCGTCGCCGGTTCGGCTTCCGACGTCTGGGCATCCTGCTATCCAGGGAAGGCGTGGTGATGAACCGTAAG AAGCTGCTGCGGCTGTACCGCGAGGAGAAGCTGGCGGTGCGCCCAAGGCGTGGCCGCAAGCGAGCCCTGGGTTGCCGGGC CCCAATGGCGATCCCGCAGGGGCCGAACCAACACTGGTCGCTGGATTTTCTGTCCGACGCCTTCACCGACGGCCGCAGGT TCCGCATCTTTGCCGTGGTGGATGATTTTACCCGTGAGTACTTGGCGCTGGTCGCCGACACTTCGCTGTCCGGTGTCCGT GTCGCCCGGGAGTTGGATGGTCTGATCGCCGGGCGCGGCAAGCCGCGGATGATCGTCAGCGACAACGGCACCGAGTTCAC CAGCAAGGCCATGCTGCGCTGGAGCCAGGATCACCGGGTGGAATGGCATTACATCGCACCGGGCAAGCCCATGCAGAACG GCTTCGTCGAGAGCTTCAACGGCAAGCTACGCGATGAATGCCTCAACGAGACGCTGTTTGGCTCGATCAATCATGCTCGG GCCGTCCTGGCGGACTGGAAGGAAGATTACAACCATGTGCGGCCCTACACCGCCTTGGGCGGCATCGCCCCAGCGCAGGC CGCCGCACGAGCGCGAGCGCAATGTGGGCCGGGGCATGCCCCGGCCCACATTGCCATCACCGCCCATTTCGGGCATCACG GGGAGACGGGGCTCTACCTCTGA
Upstream 100 bases:
>100_bases GGCTAAAGGCGCTTGAGGACGAAAACGCTCGGCTGAAGAAACTGCTGGCCGAAGCCATGCTCGACAACGCCGTGCTGAAG GAAATTTCCTCAAAAAAATG
Downstream 100 bases:
>100_bases CTGGGATCAATCAGGGGAACAGGTCATGGCCGTTGTCGGATGGCTGACGAGCATCTGGGAATGCTGGGACCGTGGCTGGC ACGCCCCGCATCCTGTTCGT
Product: transposase
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTPAARRIVVAHVRELFGLSERRACLIVGISRRVMRYRSCRPDDAPIRARLRELAAERRRFGFRRLGILLSREGVVMNRK KLLRLYREEKLAVRPRRGRKRALGCRAPMAIPQGPNQHWSLDFLSDAFTDGRRFRIFAVVDDFTREYLALVADTSLSGVR VARELDGLIAGRGKPRMIVSDNGTEFTSKAMLRWSQDHRVEWHYIAPGKPMQNGFVESFNGKLRDECLNETLFGSINHAR AVLADWKEDYNHVRPYTALGGIAPAQAAARARAQCGPGHAPAHIAITAHFGHHGETGLYL
Sequences:
>Translated_300_residues MTPAARRIVVAHVRELFGLSERRACLIVGISRRVMRYRSCRPDDAPIRARLRELAAERRRFGFRRLGILLSREGVVMNRK KLLRLYREEKLAVRPRRGRKRALGCRAPMAIPQGPNQHWSLDFLSDAFTDGRRFRIFAVVDDFTREYLALVADTSLSGVR VARELDGLIAGRGKPRMIVSDNGTEFTSKAMLRWSQDHRVEWHYIAPGKPMQNGFVESFNGKLRDECLNETLFGSINHAR AVLADWKEDYNHVRPYTALGGIAPAQAAARARAQCGPGHAPAHIAITAHFGHHGETGLYL >Mature_299_residues TPAARRIVVAHVRELFGLSERRACLIVGISRRVMRYRSCRPDDAPIRARLRELAAERRRFGFRRLGILLSREGVVMNRKK LLRLYREEKLAVRPRRGRKRALGCRAPMAIPQGPNQHWSLDFLSDAFTDGRRFRIFAVVDDFTREYLALVADTSLSGVRV ARELDGLIAGRGKPRMIVSDNGTEFTSKAMLRWSQDHRVEWHYIAPGKPMQNGFVESFNGKLRDECLNETLFGSINHARA VLADWKEDYNHVRPYTALGGIAPAQAAARARAQCGPGHAPAHIAITAHFGHHGETGLYL
Specific function: Involved in the transposition of the insertion sequence is150 [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1789981, Length=244, Percent_Identity=26.2295081967213, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 33944; Mature: 33812
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: PS50994 INTEGRASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPAARRIVVAHVRELFGLSERRACLIVGISRRVMRYRSCRPDDAPIRARLRELAAERRR CCCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FGFRRLGILLSREGVVMNRKKLLRLYREEKLAVRPRRGRKRALGCRAPMAIPQGPNQHWS HCHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEE LDFLSDAFTDGRRFRIFAVVDDFTREYLALVADTSLSGVRVARELDGLIAGRGKPRMIVS HHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEC DNGTEFTSKAMLRWSQDHRVEWHYIAPGKPMQNGFVESFNGKLRDECLNETLFGSINHAR CCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHH AVLADWKEDYNHVRPYTALGGIAPAQAAARARAQCGPGHAPAHIAITAHFGHHGETGLYL HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC >Mature Secondary Structure TPAARRIVVAHVRELFGLSERRACLIVGISRRVMRYRSCRPDDAPIRARLRELAAERRR CCHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH FGFRRLGILLSREGVVMNRKKLLRLYREEKLAVRPRRGRKRALGCRAPMAIPQGPNQHWS HCHHHHHHHHCCCCCEECHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCCCEE LDFLSDAFTDGRRFRIFAVVDDFTREYLALVADTSLSGVRVARELDGLIAGRGKPRMIVS HHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEC DNGTEFTSKAMLRWSQDHRVEWHYIAPGKPMQNGFVESFNGKLRDECLNETLFGSINHAR CCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHCCHHHHHHHHHHHHCCHHHHH AVLADWKEDYNHVRPYTALGGIAPAQAAARARAQCGPGHAPAHIAITAHFGHHGETGLYL HHHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1718819 [H]