Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83312184

Identifier: 83312184

GI number: 83312184

Start: 3334197

End: 3334502

Strand: Reverse

Name: 83312184

Synonym: amb3085

Alternate gene names: NA

Gene position: 3334502-3334197 (Counterclockwise)

Preceding gene: 83312185

Following gene: 83312183

Centisome position: 67.13

GC content: 63.4

Gene sequence:

>306_bases
GTGGTTCCAGTACCAGGTCAAGGCCGCCGATATCGGCCTGCGTGCCAAGACCTTCCTGGAGCAGAACGGCGCCAAGAAGG
TGGAAGCCGCTCCGGCCAAGTAAAACCGGACCCGGTTGGATCGGGGTGGGATCGCTCCCGCCCCGGTTCGCTCCAAAGAC
CCGGCGGGGTGGGCTTGCCCGCTCCGCCGTTTTTTTTTGAATTCCCCAGCCTGACCGGCATCAGCTCCCCGACCGGCATC
AGCCTGGACCCCGGAAAAATCCAAGACTTAACCAAAGTCATGTGGGTGCCCGCACCCCAGGGGTAG

Upstream 100 bases:

>100_bases
ACGCCACCGAGCAGCTGGGCTATGCCGAGCAGAACAAGAAGAAGTCTGAAGAGTTCGCCGCCAAGGGCGACTACAACAGC
GCCTTCCTGTGGGCCGAGCA

Downstream 100 bases:

>100_bases
TTTCCGTCGAAATTATCCGGACACGAGGGCTGGCCTGACCTTGCTCTCGGTCTTCCCGAGCCTGGAGAGGATCAGACATG
TTCAAGACCATCAAGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MVPVPGQGRRYRPACQDLPGAERRQEGGSRSGQVKPDPVGSGWDRSRPGSLQRPGGVGLPAPPFFFEFPSLTGISSPTGI
SLDPGKIQDLTKVMWVPAPQG

Sequences:

>Translated_101_residues
MVPVPGQGRRYRPACQDLPGAERRQEGGSRSGQVKPDPVGSGWDRSRPGSLQRPGGVGLPAPPFFFEFPSLTGISSPTGI
SLDPGKIQDLTKVMWVPAPQG
>Mature_101_residues
MVPVPGQGRRYRPACQDLPGAERRQEGGSRSGQVKPDPVGSGWDRSRPGSLQRPGGVGLPAPPFFFEFPSLTGISSPTGI
SLDPGKIQDLTKVMWVPAPQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10708; Mature: 10708

Theoretical pI: Translated: 10.59; Mature: 10.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVPVPGQGRRYRPACQDLPGAERRQEGGSRSGQVKPDPVGSGWDRSRPGSLQRPGGVGLP
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPFFFEFPSLTGISSPTGISLDPGKIQDLTKVMWVPAPQG
CCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCC
>Mature Secondary Structure
MVPVPGQGRRYRPACQDLPGAERRQEGGSRSGQVKPDPVGSGWDRSRPGSLQRPGGVGLP
CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APPFFFEFPSLTGISSPTGISLDPGKIQDLTKVMWVPAPQG
CCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA