| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83312176
Identifier: 83312176
GI number: 83312176
Start: 3327333
End: 3327830
Strand: Reverse
Name: 83312176
Synonym: amb3077
Alternate gene names: NA
Gene position: 3327830-3327333 (Counterclockwise)
Preceding gene: 83312177
Following gene: 83312175
Centisome position: 67.0
GC content: 67.67
Gene sequence:
>498_bases ATGTGCGAGCATCATGGTCTCAATCGCCGCCGCTTCCTGGCTCTGGTTCCGGGCATGGTGATCGCCGTGTCGGCCTGCGG CCAGTCCAGCACCGGCCCGGCCGAGATCAAGTGGGGCCGCGAGACCTGCGAGTATTGCGGCATGATCATTGACGATCCCC ATTTCGCCGCCCAGGTGCGGGGTGCCGACCGCAAGATCCACAAGTTCGACGATCTGGGCGATGCCGTGCTGTGGATGGCC AAGCAGAACTGGGCCGATGACGCGTCGGTGGAATTCTGGGTCGGCGGCCTGGAGACCGGCCAGTGGATGGACGGGCGCAA GGCCCTTTACGTGGACGGCCAGCACAGCCCCATGGCCCACGGCTTTGGCGCCGTGGCGGCGGGGCAGGCGGGCGCCATGG ACTATGCCGCCATGAAGAACGCGGTGCTGGCCAAGGGCTCGACCAGCCGCTGCGAGCCCTCCGAGGCCCCCGCGAACACC ACGACGAGAGACGGCTGA
Upstream 100 bases:
>100_bases GCGGCGTGGTCAACGGGCCCGACCGCCTGCGCTTCCTGGGCGTTCTCGCCCGCTATGCCGGTCTGGTGGCCGGCATCGAG ATGAAATAGGAGCGGACATC
Downstream 100 bases:
>100_bases TGACTCTGTTCATGTCATCCCGAGGGCGCGGCGCGGCCGAGGGATCTCATCCTGGCACGCTGTGCCCGAATCGGCCGAGC CGGTCCAGGCGGGGATTCCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 165
Protein sequence:
>165_residues MCEHHGLNRRRFLALVPGMVIAVSACGQSSTGPAEIKWGRETCEYCGMIIDDPHFAAQVRGADRKIHKFDDLGDAVLWMA KQNWADDASVEFWVGGLETGQWMDGRKALYVDGQHSPMAHGFGAVAAGQAGAMDYAAMKNAVLAKGSTSRCEPSEAPANT TTRDG
Sequences:
>Translated_165_residues MCEHHGLNRRRFLALVPGMVIAVSACGQSSTGPAEIKWGRETCEYCGMIIDDPHFAAQVRGADRKIHKFDDLGDAVLWMA KQNWADDASVEFWVGGLETGQWMDGRKALYVDGQHSPMAHGFGAVAAGQAGAMDYAAMKNAVLAKGSTSRCEPSEAPANT TTRDG >Mature_165_residues MCEHHGLNRRRFLALVPGMVIAVSACGQSSTGPAEIKWGRETCEYCGMIIDDPHFAAQVRGADRKIHKFDDLGDAVLWMA KQNWADDASVEFWVGGLETGQWMDGRKALYVDGQHSPMAHGFGAVAAGQAGAMDYAAMKNAVLAKGSTSRCEPSEAPANT TTRDG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17744; Mature: 17744
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCEHHGLNRRRFLALVPGMVIAVSACGQSSTGPAEIKWGRETCEYCGMIIDDPHFAAQVR CCCCCCCCHHHHHHHHCCHHEEEECCCCCCCCCCEEEECHHHHHHCCEEECCCCCEEEEC GADRKIHKFDDLGDAVLWMAKQNWADDASVEFWVGGLETGQWMDGRKALYVDGQHSPMAH CCCCHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCC GFGAVAAGQAGAMDYAAMKNAVLAKGSTSRCEPSEAPANTTTRDG CCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MCEHHGLNRRRFLALVPGMVIAVSACGQSSTGPAEIKWGRETCEYCGMIIDDPHFAAQVR CCCCCCCCHHHHHHHHCCHHEEEECCCCCCCCCCEEEECHHHHHHCCEEECCCCCEEEEC GADRKIHKFDDLGDAVLWMAKQNWADDASVEFWVGGLETGQWMDGRKALYVDGQHSPMAH CCCCHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCC GFGAVAAGQAGAMDYAAMKNAVLAKGSTSRCEPSEAPANTTTRDG CCCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA