| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83312143
Identifier: 83312143
GI number: 83312143
Start: 3283881
End: 3284690
Strand: Reverse
Name: 83312143
Synonym: amb3044
Alternate gene names: NA
Gene position: 3284690-3283881 (Counterclockwise)
Preceding gene: 83312144
Following gene: 83312142
Centisome position: 66.13
GC content: 67.28
Gene sequence:
>810_bases ATGAAACGTCTGCTGCTTGCCGCCATGGCGCTGTTTTCGCTGGCTGCTTCGCCCCTGGGGGCGCAAGAGCGCTTCATCAC CCTGGCCTCGACCACGTCCACCGAGCAATCGGGGCTGTTCGGCCATCTGCTGCCGCTGTTCAAGGCCGAGACCGGCATCG AGGTCCGCGTGGTGGCGGTGGGAACCGGCCAGGCCCTCAAGCTGGGCGAGCGCGGCGATGCCGATGCCCTGCTGGTCCAT GACCGGGCCGGCGAGGACAAGTTCGTGGCCGACGGCTTCGGCATCGATCGCCGTGACGTGATGTACAACGACTTCGTGGT GGTGGGGCCGGCTTCCGATCCGGCCGGCATCAAGGGCGGCAAGGATGCCGCCGCCGCCTTCGGCAAGATCGCCGCCGCCA AGGCGCCCTTCGCCTCGCGCGGCGACGATTCCGGCACCCATCGCAGCGAGTTGCGCCTGTGGAAGAAGGCCGGGGTGGAC ATCAGGTCCGGCGGTGGCTGGTACCGCGAACTGGGAGCCGGCATGGGGCCGACCCTCAATACGGCCGCCGGCATGAACGC CTACGCCCTGGCCGATCGCGGCACCTGGGCCAGCTTCAAGAACCGCCAGTCCCTGGAGATCCTGGTGGAAGGCGACCGCG CCCTGTTCAATCCCTATGGCTCGATTCTGGTCAACCCCGAGACCCACAAGGGCATCAAGGCCGCCGACGCCAAGACCTGG CATCTGTGGCTGACCGGTTCCAAGGGGCAGGCCGCCATCGCCTCGTTCAAGATCGGCGGCGAGCAGTTGTTCTTCGGCGA TGCCAAGTAA
Upstream 100 bases:
>100_bases GTGGAGCACGCCCCGGCGGCGGAATTCTTCAAAGGGCCGCAATCGGCCCAGGCCCGGGCCTTCCTGGCCGGCGAACTGGT TTGTTGAGGAGGATCGATCC
Downstream 100 bases:
>100_bases GGGGAGGGGGGCATGAACCGCAGAGCCTTTCTGGGGGGCGCGCTGGGGACCATCGGCGTGGTGTGCGGGGCGGGGGCGGC GGAACCGTCCGAGGTGGTGC
Product: ABC-type tungstate transport system, permease component
Products: NA
Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; TUNGstate ABC Transporter Permease-Like Protein; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Molybdate Or TUNGstate Transport; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MKRLLLAAMALFSLAASPLGAQERFITLASTTSTEQSGLFGHLLPLFKAETGIEVRVVAVGTGQALKLGERGDADALLVH DRAGEDKFVADGFGIDRRDVMYNDFVVVGPASDPAGIKGGKDAAAAFGKIAAAKAPFASRGDDSGTHRSELRLWKKAGVD IRSGGGWYRELGAGMGPTLNTAAGMNAYALADRGTWASFKNRQSLEILVEGDRALFNPYGSILVNPETHKGIKAADAKTW HLWLTGSKGQAAIASFKIGGEQLFFGDAK
Sequences:
>Translated_269_residues MKRLLLAAMALFSLAASPLGAQERFITLASTTSTEQSGLFGHLLPLFKAETGIEVRVVAVGTGQALKLGERGDADALLVH DRAGEDKFVADGFGIDRRDVMYNDFVVVGPASDPAGIKGGKDAAAAFGKIAAAKAPFASRGDDSGTHRSELRLWKKAGVD IRSGGGWYRELGAGMGPTLNTAAGMNAYALADRGTWASFKNRQSLEILVEGDRALFNPYGSILVNPETHKGIKAADAKTW HLWLTGSKGQAAIASFKIGGEQLFFGDAK >Mature_269_residues MKRLLLAAMALFSLAASPLGAQERFITLASTTSTEQSGLFGHLLPLFKAETGIEVRVVAVGTGQALKLGERGDADALLVH DRAGEDKFVADGFGIDRRDVMYNDFVVVGPASDPAGIKGGKDAAAAFGKIAAAKAPFASRGDDSGTHRSELRLWKKAGVD IRSGGGWYRELGAGMGPTLNTAAGMNAYALADRGTWASFKNRQSLEILVEGDRALFNPYGSILVNPETHKGIKAADAKTW HLWLTGSKGQAAIASFKIGGEQLFFGDAK
Specific function: Unknown
COG id: COG2998
COG function: function code H; ABC-type tungstate transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28383; Mature: 28383
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLLAAMALFSLAASPLGAQERFITLASTTSTEQSGLFGHLLPLFKAETGIEVRVVAV CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEE GTGQALKLGERGDADALLVHDRAGEDKFVADGFGIDRRDVMYNDFVVVGPASDPAGIKGG ECCCEEEECCCCCCCEEEEECCCCCCCEEECCCCCCCCCEEECCEEEEECCCCCCCCCCC KDAAAAFGKIAAAKAPFASRGDDSGTHRSELRLWKKAGVDIRSGGGWYRELGAGMGPTLN CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHCCCCCCCCC TAAGMNAYALADRGTWASFKNRQSLEILVEGDRALFNPYGSILVNPETHKGIKAADAKTW CCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEECCCCCEEECCCCCCCCEECCCEEE HLWLTGSKGQAAIASFKIGGEQLFFGDAK EEEEECCCCCEEEEEEEECCCEEEEECCC >Mature Secondary Structure MKRLLLAAMALFSLAASPLGAQERFITLASTTSTEQSGLFGHLLPLFKAETGIEVRVVAV CHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEE GTGQALKLGERGDADALLVHDRAGEDKFVADGFGIDRRDVMYNDFVVVGPASDPAGIKGG ECCCEEEECCCCCCCEEEEECCCCCCCEEECCCCCCCCCEEECCEEEEECCCCCCCCCCC KDAAAAFGKIAAAKAPFASRGDDSGTHRSELRLWKKAGVDIRSGGGWYRELGAGMGPTLN CHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEECCCCHHHHHCCCCCCCCC TAAGMNAYALADRGTWASFKNRQSLEILVEGDRALFNPYGSILVNPETHKGIKAADAKTW CCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCEEECCCCCEEECCCCCCCCEECCCEEE HLWLTGSKGQAAIASFKIGGEQLFFGDAK EEEEECCCCCEEEEEEEECCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA