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The map label for this gene is yfhF [C]

Identifier: 83312125

GI number: 83312125

Start: 3269218

End: 3269553

Strand: Reverse

Name: yfhF [C]

Synonym: amb3026

Alternate gene names: 83312125

Gene position: 3269553-3269218 (Counterclockwise)

Preceding gene: 83312126

Following gene: 83312124

Centisome position: 65.82

GC content: 61.61

Gene sequence:

>336_bases
ATGGCACCTGCTCCCATGACCATCACCGACGCCGCCGCCGAGCGGGTCAAGGTCCTGCTGGAAAAACGCGGCAAGCCCAG
CGTGGGCATCCGCATCGGCGTGCGCTCCAAGGGCTGCTCGGGCATGTCCTACACCCTGGAATACGCCGACGAGAAGACTC
AGTTCGACGAGATCCTCGAAGACAAGGGCGTCACCGTCCTGATCGATCCCAAGGCGACCATGTTCATCCTGGGAACCGAG
ATGGACTTCGTCGAGGACAAGATGCAGTCGGGCTTCGTCTTCAAGAACCCCAACGAAAAGGGCCGGTGCGGCTGCGGCGA
ATCCTTCCACGTCTGA

Upstream 100 bases:

>100_bases
TTCGGTGTTGGCCGAGGATGCTATCAAGGCCGCCATCGCCGACTACAAGAAGAAGTCGGGCTGACGGCTCCGGACGGTTT
GACGAGAAGAGGGGAAGACC

Downstream 100 bases:

>100_bases
GCCCCGCCCCGTTAAAGTGAAGAAGGAACCGGAGAGGACGATGAACGCCCCCGCCGCCGCCCAGATCGTTTCCTGTTGGT
CCTGCAAGGGGCCGGTGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MAPAPMTITDAAAERVKVLLEKRGKPSVGIRIGVRSKGCSGMSYTLEYADEKTQFDEILEDKGVTVLIDPKATMFILGTE
MDFVEDKMQSGFVFKNPNEKGRCGCGESFHV

Sequences:

>Translated_111_residues
MAPAPMTITDAAAERVKVLLEKRGKPSVGIRIGVRSKGCSGMSYTLEYADEKTQFDEILEDKGVTVLIDPKATMFILGTE
MDFVEDKMQSGFVFKNPNEKGRCGCGESFHV
>Mature_110_residues
APAPMTITDAAAERVKVLLEKRGKPSVGIRIGVRSKGCSGMSYTLEYADEKTQFDEILEDKGVTVLIDPKATMFILGTEM
DFVEDKMQSGFVFKNPNEKGRCGCGESFHV

Specific function: Unknown

COG id: COG0316

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesB/iscA family [H]

Homologues:

Organism=Homo sapiens, GI52426768, Length=109, Percent_Identity=53.2110091743119, Blast_Score=120, Evalue=3e-28,
Organism=Escherichia coli, GI1788877, Length=106, Percent_Identity=53.7735849056604, Blast_Score=123, Evalue=3e-30,
Organism=Escherichia coli, GI1786351, Length=107, Percent_Identity=35.5140186915888, Blast_Score=89, Evalue=6e-20,
Organism=Escherichia coli, GI1787974, Length=106, Percent_Identity=39.622641509434, Blast_Score=84, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI25146411, Length=108, Percent_Identity=52.7777777777778, Blast_Score=130, Evalue=1e-31,
Organism=Caenorhabditis elegans, GI193209025, Length=108, Percent_Identity=52.7777777777778, Blast_Score=130, Evalue=1e-31,
Organism=Saccharomyces cerevisiae, GI6323001, Length=108, Percent_Identity=48.1481481481481, Blast_Score=112, Evalue=1e-26,
Organism=Drosophila melanogaster, GI24642263, Length=109, Percent_Identity=55.9633027522936, Blast_Score=124, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000361
- InterPro:   IPR016092
- InterPro:   IPR017870 [H]

Pfam domain/function: PF01521 Fe-S_biosyn [H]

EC number: NA

Molecular weight: Translated: 12196; Mature: 12065

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS01337 ODC_AZ ; PS01152 HESB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPAPMTITDAAAERVKVLLEKRGKPSVGIRIGVRSKGCSGMSYTLEYADEKTQFDEILE
CCCCCCEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHH
DKGVTVLIDPKATMFILGTEMDFVEDKMQSGFVFKNPNEKGRCGCGESFHV
CCCCEEEECCCCEEEEEECCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure 
APAPMTITDAAAERVKVLLEKRGKPSVGIRIGVRSKGCSGMSYTLEYADEKTQFDEILE
CCCCCEECHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCHHHHHHHH
DKGVTVLIDPKATMFILGTEMDFVEDKMQSGFVFKNPNEKGRCGCGESFHV
CCCCEEEECCCCEEEEEECCCHHHHHHHHCCCEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]