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The map label for this gene is 83312085

Identifier: 83312085

GI number: 83312085

Start: 3221520

End: 3222296

Strand: Reverse

Name: 83312085

Synonym: amb2986

Alternate gene names: NA

Gene position: 3222296-3221520 (Counterclockwise)

Preceding gene: 83312086

Following gene: 83312077

Centisome position: 64.87

GC content: 64.09

Gene sequence:

>777_bases
ATGATTTCCATGGCCATCCACACCCACCATCCCGATGTCCGATTGGTAACGCCGGCCCAGGCCGCCGAATGGCTGAATGC
CGGCTGGCGCGACGTTTGGCGCAATCCCGGTCTCAGCCTGGGATTCGGCGCCGTCTATGCGGCGATCGGCATGGGGCTGT
TCCTTGTGCTGAATGTTCTGGACATGGGGTCGCTGCTACTTCCCCTGGCTGCCGGCTTTATGCTGGTCGGCCCCCTGGCG
GCGGTGTTTCTCTATGAGATCAGCCGCCGGACCGAGGCGGGCGAGGTCGTCGATCTCGGCCGGGTGGTGGGCGGGGTCAC
GTCGCGCCTGGATCAGGTCGGCAATATGGGGCTGGTGCTGTCCATTCTGCTGATGGCCTGGCTGCTGGCCGGGCTTGTGG
TGTTCGCCCTGTTCTATCCGCCGGGCATGCCGTTGCCCCTGGGCAATTTCATCGAGGATGTGGTGCTGCGTCCGGAATCC
TTCCGGTTTCTGACGGTGGGAACCCTGGTGGGTGGCGTCCTGGCAGTGATCGCCTTCTCCATCAGCGTCTTCGCCATGCC
CATGCTGCTGGACCGTGACGTGAGCGTCATCGAGGCCATGGAGTTCAGCGTCGACGCGGTACGCGTCAACTGGCGCACCA
TGATCGGCTGGGCGGCCACCATCGCCGTGGTGACGTTCTTCGGCATGGCCACCGCCTTCGTCGGCATGATCGTGGCGTTG
CCAGTCGTCGCCCATGCCAGCTGGCATGCGTATCGCGATGTGATGGGAAGGCATTGA

Upstream 100 bases:

>100_bases
GGGGGGCTTGTTTCATCTTTGGAGAGTTTCCACTTATGTGACAGAAGTGCCCTGCGCTTCGGCCCGGGGAAAAGACACTC
CTTCATCACAGGGGGGTACA

Downstream 100 bases:

>100_bases
TTCTTCACGTCACAGCCCCTTACAACTCCTTTCCCTTCGTTGGTGGACCTCCCTATGTGGGCAAGGCAAGGTTGTAGTAG
CGCCACTGCAACCTTTCTTG

Product: integral membrane protein

Products: NA

Alternate protein names: Cytochrome C Oxidase Subunit I; Conserved Integral Membrane Protein; Integral Membrane Protein-Like Protein; Integral Membrane-Like Protein; Transmembrane Protein; Integral Membrane; Integral Membrane Protein-Like

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MISMAIHTHHPDVRLVTPAQAAEWLNAGWRDVWRNPGLSLGFGAVYAAIGMGLFLVLNVLDMGSLLLPLAAGFMLVGPLA
AVFLYEISRRTEAGEVVDLGRVVGGVTSRLDQVGNMGLVLSILLMAWLLAGLVVFALFYPPGMPLPLGNFIEDVVLRPES
FRFLTVGTLVGGVLAVIAFSISVFAMPMLLDRDVSVIEAMEFSVDAVRVNWRTMIGWAATIAVVTFFGMATAFVGMIVAL
PVVAHASWHAYRDVMGRH

Sequences:

>Translated_258_residues
MISMAIHTHHPDVRLVTPAQAAEWLNAGWRDVWRNPGLSLGFGAVYAAIGMGLFLVLNVLDMGSLLLPLAAGFMLVGPLA
AVFLYEISRRTEAGEVVDLGRVVGGVTSRLDQVGNMGLVLSILLMAWLLAGLVVFALFYPPGMPLPLGNFIEDVVLRPES
FRFLTVGTLVGGVLAVIAFSISVFAMPMLLDRDVSVIEAMEFSVDAVRVNWRTMIGWAATIAVVTFFGMATAFVGMIVAL
PVVAHASWHAYRDVMGRH
>Mature_258_residues
MISMAIHTHHPDVRLVTPAQAAEWLNAGWRDVWRNPGLSLGFGAVYAAIGMGLFLVLNVLDMGSLLLPLAAGFMLVGPLA
AVFLYEISRRTEAGEVVDLGRVVGGVTSRLDQVGNMGLVLSILLMAWLLAGLVVFALFYPPGMPLPLGNFIEDVVLRPES
FRFLTVGTLVGGVLAVIAFSISVFAMPMLLDRDVSVIEAMEFSVDAVRVNWRTMIGWAATIAVVTFFGMATAFVGMIVAL
PVVAHASWHAYRDVMGRH

Specific function: Unknown

COG id: COG5473

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27839; Mature: 27839

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISMAIHTHHPDVRLVTPAQAAEWLNAGWRDVWRNPGLSLGFGAVYAAIGMGLFLVLNVL
CCEEEEECCCCCEEEECHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
DMGSLLLPLAAGFMLVGPLAAVFLYEISRRTEAGEVVDLGRVVGGVTSRLDQVGNMGLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
SILLMAWLLAGLVVFALFYPPGMPLPLGNFIEDVVLRPESFRFLTVGTLVGGVLAVIAFS
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ISVFAMPMLLDRDVSVIEAMEFSVDAVRVNWRTMIGWAATIAVVTFFGMATAFVGMIVAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVVAHASWHAYRDVMGRH
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MISMAIHTHHPDVRLVTPAQAAEWLNAGWRDVWRNPGLSLGFGAVYAAIGMGLFLVLNVL
CCEEEEECCCCCEEEECHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
DMGSLLLPLAAGFMLVGPLAAVFLYEISRRTEAGEVVDLGRVVGGVTSRLDQVGNMGLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHH
SILLMAWLLAGLVVFALFYPPGMPLPLGNFIEDVVLRPESFRFLTVGTLVGGVLAVIAFS
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
ISVFAMPMLLDRDVSVIEAMEFSVDAVRVNWRTMIGWAATIAVVTFFGMATAFVGMIVAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVVAHASWHAYRDVMGRH
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA