| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is resA [H]
Identifier: 83312013
GI number: 83312013
Start: 3110318
End: 3110806
Strand: Reverse
Name: resA [H]
Synonym: amb2914
Alternate gene names: 83312013
Gene position: 3110806-3110318 (Counterclockwise)
Preceding gene: 83312014
Following gene: 83312012
Centisome position: 62.63
GC content: 66.26
Gene sequence:
>489_bases ATGAGAGCGTTCCGTCTGTTGGCCGTCCTGCTGCTGTTGGCTGGGTGCGGCGAGGAGGGGGGCAAGGCCCCCCATGTGGG CGATGCGCCGCCCGCCTTTAAGCTGAGCGCCCTGGACGGGGCGGTGGTGGATTATCCCGCCCAACTGTCCGGCAAGGTGG TGGTGGTGCGGTTCTGGGCGACGTGGTGCCCATTCTGTAAGGACGAAATGAAGATGATCCAGGCCGTGTGGAGCCAGTCC CGCGACAGGGGCTTCGAGGTTCTGGCGGTCAATGCCGGCCAGGACAAGGGCGACATCGACGGATTCGTCGCCAAGCTGGG CGTGACCTATCCGGTGCTGCTGGACCCCGGCTCCAAGGTCACCCGGCAATACGGCGTCACCGGCCTGCCCATGACCCTGT TCGTCGGCCGCGACGGCAGGATCAAAGGCCGCATCCTGGGCGAGACCGACGAGGCCACCTTCCGCCGCAAGCTGGAGGAG CTGCTATGA
Upstream 100 bases:
>100_bases TCGGCCTGTTCGGCGCGGTGACGCTGTGGCTGATCTGGCGCTCGCACCTGATCTTGCTGGAGCCCGAGCGGCTTTTGCCC ATCCTGCCCGGAGGCCAACC
Downstream 100 bases:
>100_bases ACAATACGCCGGAGCAGAGCTGCGACCTTTGCGGTCTGCCGGTGCTCAAGGACGGCCTACACTTGAAGGCCTCTGGGCGG GAATACGCCTTTTGCTGCGA
Product: Thiol-disulfide isomerase and thioredoxins
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MRAFRLLAVLLLLAGCGEEGGKAPHVGDAPPAFKLSALDGAVVDYPAQLSGKVVVVRFWATWCPFCKDEMKMIQAVWSQS RDRGFEVLAVNAGQDKGDIDGFVAKLGVTYPVLLDPGSKVTRQYGVTGLPMTLFVGRDGRIKGRILGETDEATFRRKLEE LL
Sequences:
>Translated_162_residues MRAFRLLAVLLLLAGCGEEGGKAPHVGDAPPAFKLSALDGAVVDYPAQLSGKVVVVRFWATWCPFCKDEMKMIQAVWSQS RDRGFEVLAVNAGQDKGDIDGFVAKLGVTYPVLLDPGSKVTRQYGVTGLPMTLFVGRDGRIKGRILGETDEATFRRKLEE LL >Mature_162_residues MRAFRLLAVLLLLAGCGEEGGKAPHVGDAPPAFKLSALDGAVVDYPAQLSGKVVVVRFWATWCPFCKDEMKMIQAVWSQS RDRGFEVLAVNAGQDKGDIDGFVAKLGVTYPVLLDPGSKVTRQYGVTGLPMTLFVGRDGRIKGRILGETDEATFRRKLEE LL
Specific function: Thiol-disulfide oxidoreductase which is required in disulfide reduction during c-type cytochrome synthesis. May accept reducing equivalents from CcdA, leading to breakage of disulfide bonds in apocytochrome c; following this reduction heme can be covalent
COG id: COG0526
COG function: function code OC; Thiol-disulfide isomerase and thioredoxins
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein. Note=The thioredoxin-like motif is exposed on the outside of the membrane (By similarity) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
Organism=Escherichia coli, GI1788523, Length=139, Percent_Identity=28.0575539568345, Blast_Score=61, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 17627; Mature: 17627
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAFRLLAVLLLLAGCGEEGGKAPHVGDAPPAFKLSALDGAVVDYPAQLSGKVVVVRFWA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCEEEEEEHH TWCPFCKDEMKMIQAVWSQSRDRGFEVLAVNAGQDKGDIDGFVAKLGVTYPVLLDPGSKV HHCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHH TRQYGVTGLPMTLFVGRDGRIKGRILGETDEATFRRKLEELL HHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHC >Mature Secondary Structure MRAFRLLAVLLLLAGCGEEGGKAPHVGDAPPAFKLSALDGAVVDYPAQLSGKVVVVRFWA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCEECCCCCCCCCEEEEEEHH TWCPFCKDEMKMIQAVWSQSRDRGFEVLAVNAGQDKGDIDGFVAKLGVTYPVLLDPGSKV HHCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHH TRQYGVTGLPMTLFVGRDGRIKGRILGETDEATFRRKLEELL HHHHCCCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA