| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311911
Identifier: 83311911
GI number: 83311911
Start: 3003063
End: 3004106
Strand: Reverse
Name: 83311911
Synonym: amb2812
Alternate gene names: NA
Gene position: 3004106-3003063 (Counterclockwise)
Preceding gene: 83311912
Following gene: 83311907
Centisome position: 60.48
GC content: 70.02
Gene sequence:
>1044_bases ATGAGGCATGTGGTGATTTCGGTCGTGGTGGCCCTGGTGCTGGCGCTGGCCGGTGCGGGCGATGCCCTGGCCAAGGCGGG CAGTACCTCCAAGTCCAGCGGCGGCAGCTTCGGCTCGCGCGGGTCGCGGACCCATGACGCGCCGATGGAGCGCACCCTGG CGCCGCCTCCGGCGCAGACCAAGCCCGCAGGACCGCCGCCGCCGCCCCAGGCAGCCCCGCGCCCCGGCGCGGTTGACGCG GCTCCGCTGGCTCCGGCCGGCGCCGCCACTTCCGGCCTGCGTCCGGCTTCGCCCATGGGCGCTCCCATGGGAGCCCAGCA GCCCGGCTTCTTCCAGCGCAATCCCTTCATGGCCGGCTTGGCCGGCGGCCTGGTGGGCGCCGGGATCGGCTCCATGCTGT TCGGCCATTCGCCGGCCTTGGCCGCGGCGGCCGACGCGTCCCCCGGCGGCAGCTTCCTGGGACTGCTGCTCCAACTGGCG ATTATCGGCGGTCTGGCCTGGCTGGCGTACCGTCTGTTCCGCGGGCGCTCCCAGCCGGCGGTTCCGGCAGGCAATCCCTA CATGCGCACCGCCCCGGGCGAGCATGTGGAGCCCATGATCGGCGCCGGCCCGGTCCAGCCGCGCATCGAGCGCGAGTTCG ATGCGTCCGGTGGCGACCAGGAGGCCTTTACAGAAATCCTGCAAGGGGTGCAAAAGGCCTGGAGTGACGGCAACCTGTTG CAGTTGAAGCGCTTCGCCACTCCCGAGGTGGTTGCCTTCCTCTCCGAGGACATGAGCCGCAATGCCAGCGAAGGCGTGGC CAACAAGGTGGAGAACGTCACCCTGCTGAGGGGCGACGTCAGCGAATCGTGGAGCGAGGGCGGCTTCGATTACCTGACCG CCATCCTGACCTTCTCGTGCAACGACTACATGGTGCGTCTGGATACCGGCGCGGTGGCCGACGGCAATCCCCATGCCACC GTGACCCATACCGAGGCCTGGACCTTCGTGCGCAGTTCCAATGGCGGCCGCTGGCTGCTGTCGGCGGTGCAGCAGGTTCA GTAG
Upstream 100 bases:
>100_bases CGAAGCGGGGTTTTTCCGCAATCTGTTAAATTTCTGTAGCTGATTTGCTTTCCGCCCAAGGCGCCCTATAACATGGGTGA GATTCCTTGGGAGGAACGAG
Downstream 100 bases:
>100_bases GCGGCTGACATGGAAAAGCCCCCGGCCGCAGGGCCGGGGGCTGTTTTTTTTCGAGCAACCTAGGTTAAATCTGACGCAGG TTGCTCAGCGGCCATTGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Mitochondrial Import Inner Membrane Translocase Subunit Tim; Tim44-Like Domain Family
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MRHVVISVVVALVLALAGAGDALAKAGSTSKSSGGSFGSRGSRTHDAPMERTLAPPPAQTKPAGPPPPPQAAPRPGAVDA APLAPAGAATSGLRPASPMGAPMGAQQPGFFQRNPFMAGLAGGLVGAGIGSMLFGHSPALAAAADASPGGSFLGLLLQLA IIGGLAWLAYRLFRGRSQPAVPAGNPYMRTAPGEHVEPMIGAGPVQPRIEREFDASGGDQEAFTEILQGVQKAWSDGNLL QLKRFATPEVVAFLSEDMSRNASEGVANKVENVTLLRGDVSESWSEGGFDYLTAILTFSCNDYMVRLDTGAVADGNPHAT VTHTEAWTFVRSSNGGRWLLSAVQQVQ
Sequences:
>Translated_347_residues MRHVVISVVVALVLALAGAGDALAKAGSTSKSSGGSFGSRGSRTHDAPMERTLAPPPAQTKPAGPPPPPQAAPRPGAVDA APLAPAGAATSGLRPASPMGAPMGAQQPGFFQRNPFMAGLAGGLVGAGIGSMLFGHSPALAAAADASPGGSFLGLLLQLA IIGGLAWLAYRLFRGRSQPAVPAGNPYMRTAPGEHVEPMIGAGPVQPRIEREFDASGGDQEAFTEILQGVQKAWSDGNLL QLKRFATPEVVAFLSEDMSRNASEGVANKVENVTLLRGDVSESWSEGGFDYLTAILTFSCNDYMVRLDTGAVADGNPHAT VTHTEAWTFVRSSNGGRWLLSAVQQVQ >Mature_347_residues MRHVVISVVVALVLALAGAGDALAKAGSTSKSSGGSFGSRGSRTHDAPMERTLAPPPAQTKPAGPPPPPQAAPRPGAVDA APLAPAGAATSGLRPASPMGAPMGAQQPGFFQRNPFMAGLAGGLVGAGIGSMLFGHSPALAAAADASPGGSFLGLLLQLA IIGGLAWLAYRLFRGRSQPAVPAGNPYMRTAPGEHVEPMIGAGPVQPRIEREFDASGGDQEAFTEILQGVQKAWSDGNLL QLKRFATPEVVAFLSEDMSRNASEGVANKVENVTLLRGDVSESWSEGGFDYLTAILTFSCNDYMVRLDTGAVADGNPHAT VTHTEAWTFVRSSNGGRWLLSAVQQVQ
Specific function: Unknown
COG id: COG4395
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35714; Mature: 35714
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHVVISVVVALVLALAGAGDALAKAGSTSKSSGGSFGSRGSRTHDAPMERTLAPPPAQT CHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC KPAGPPPPPQAAPRPGAVDAAPLAPAGAATSGLRPASPMGAPMGAQQPGFFQRNPFMAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AGGLVGAGIGSMLFGHSPALAAAADASPGGSFLGLLLQLAIIGGLAWLAYRLFRGRSQPA HHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPAGNPYMRTAPGEHVEPMIGAGPVQPRIEREFDASGGDQEAFTEILQGVQKAWSDGNLL CCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE QLKRFATPEVVAFLSEDMSRNASEGVANKVENVTLLRGDVSESWSEGGFDYLTAILTFSC EHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCHHHHHHCCCHHHHHHHHHHCC NDYMVRLDTGAVADGNPHATVTHTEAWTFVRSSNGGRWLLSAVQQVQ CCEEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHCC >Mature Secondary Structure MRHVVISVVVALVLALAGAGDALAKAGSTSKSSGGSFGSRGSRTHDAPMERTLAPPPAQT CHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCC KPAGPPPPPQAAPRPGAVDAAPLAPAGAATSGLRPASPMGAPMGAQQPGFFQRNPFMAGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH AGGLVGAGIGSMLFGHSPALAAAADASPGGSFLGLLLQLAIIGGLAWLAYRLFRGRSQPA HHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VPAGNPYMRTAPGEHVEPMIGAGPVQPRIEREFDASGGDQEAFTEILQGVQKAWSDGNLL CCCCCCCEECCCCCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCEE QLKRFATPEVVAFLSEDMSRNASEGVANKVENVTLLRGDVSESWSEGGFDYLTAILTFSC EHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHCEEEEECCHHHHHHCCCHHHHHHHHHHCC NDYMVRLDTGAVADGNPHATVTHTEAWTFVRSSNGGRWLLSAVQQVQ CCEEEEECCCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA