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The map label for this gene is nuoJ [H]

Identifier: 83311877

GI number: 83311877

Start: 2964727

End: 2965335

Strand: Reverse

Name: nuoJ [H]

Synonym: amb2778

Alternate gene names: 83311877

Gene position: 2965335-2964727 (Counterclockwise)

Preceding gene: 83311878

Following gene: 83311876

Centisome position: 59.7

GC content: 61.58

Gene sequence:

>609_bases
ATGTTCACGGCTCTGATCTTCTACATGTTCGCCGCAATCGCGGTGGCTTCCGGCGTGATGGTGATCTCATCGCGCAACCC
GGTGCATTCGGTGCTCTGGCTGATTCTGGCGTTCTTTAACGCGGCGGGCCTGTTCCTGCTGCTGGGCGCCGAGTTCCTGG
CCATGGTCCTGGTGATCGTCTATGTGGGCGCTGTCGCGGTGCTGTTCCTGTTCGTCGTGATGATGCTCGACATCAACATG
GTGGAGATGAAGGAAGGCTTCCTGCAGTACCTGCCCACCGGCGCTCTGATCGGCTTGGTGCTGCTGGTGGAATTGCTGGC
CATGTTCGGCGGCTGGGCCTTTGCACCCGACGTTGAAGCCATGATCAAGGCTCCCACGCCCACCTTGGACCAGGCGTCCA
ATACCGTGGCGCTGGGCAAGCTGATCTACACCAACTACGTCTACCTGTTCCAGGCGTCGGGTCTGGTGCTGCTGGTCGCC
ATGATCGGCACCATCCTGCTGACCCACCGCAAGCGGACCGGCGTGCGCAAGCAGGTCATCGCCGAGCAGGTCAACCGCTC
GCGCGATTCGGTCGAGCTCAAGAAGGTCCAGTCGGGGAGGGGCATCTGA

Upstream 100 bases:

>100_bases
TACAACAAGTCCAAGTTGCTCGCCAACGGCGACCGCTGGGAGGCCGAGCTGGCCTTCCGCATCGCCGCCGACGCGCCTTA
CCGGTGACGGGAGACCATCC

Downstream 100 bases:

>100_bases
TGTTCGAGATCGGTCTGTCCCACTATCTGGCGGTGGCCGCCATCCTGTTCACGCTGGGCGTGATGGGCATCTTCCTGAAC
CGCAAGAACGTCATCATCAT

Product: NADH:ubiquinone oxidoreductase subunit 6

Products: NA

Alternate protein names: NADH dehydrogenase I subunit J; NDH-1 subunit J [H]

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MFTALIFYMFAAIAVASGVMVISSRNPVHSVLWLILAFFNAAGLFLLLGAEFLAMVLVIVYVGAVAVLFLFVVMMLDINM
VEMKEGFLQYLPTGALIGLVLLVELLAMFGGWAFAPDVEAMIKAPTPTLDQASNTVALGKLIYTNYVYLFQASGLVLLVA
MIGTILLTHRKRTGVRKQVIAEQVNRSRDSVELKKVQSGRGI

Sequences:

>Translated_202_residues
MFTALIFYMFAAIAVASGVMVISSRNPVHSVLWLILAFFNAAGLFLLLGAEFLAMVLVIVYVGAVAVLFLFVVMMLDINM
VEMKEGFLQYLPTGALIGLVLLVELLAMFGGWAFAPDVEAMIKAPTPTLDQASNTVALGKLIYTNYVYLFQASGLVLLVA
MIGTILLTHRKRTGVRKQVIAEQVNRSRDSVELKKVQSGRGI
>Mature_202_residues
MFTALIFYMFAAIAVASGVMVISSRNPVHSVLWLILAFFNAAGLFLLLGAEFLAMVLVIVYVGAVAVLFLFVVMMLDINM
VEMKEGFLQYLPTGALIGLVLLVELLAMFGGWAFAPDVEAMIKAPTPTLDQASNTVALGKLIYTNYVYLFQASGLVLLVA
MIGTILLTHRKRTGVRKQVIAEQVNRSRDSVELKKVQSGRGI

Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat

COG id: COG0839

COG function: function code C; NADH:ubiquinone oxidoreductase subunit 6 (chain J)

Gene ontology:

Cell location: Cellular chromatophore membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 6 family [H]

Homologues:

Organism=Escherichia coli, GI1788616, Length=192, Percent_Identity=29.1666666666667, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001457 [H]

Pfam domain/function: PF00499 Oxidored_q3 [H]

EC number: =1.6.99.5 [H]

Molecular weight: Translated: 22035; Mature: 22035

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTALIFYMFAAIAVASGVMVISSRNPVHSVLWLILAFFNAAGLFLLLGAEFLAMVLVIV
CHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGAVAVLFLFVVMMLDINMVEMKEGFLQYLPTGALIGLVLLVELLAMFGGWAFAPDVEA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MIKAPTPTLDQASNTVALGKLIYTNYVYLFQASGLVLLVAMIGTILLTHRKRTGVRKQVI
HHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQVNRSRDSVELKKVQSGRGI
HHHHHCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFTALIFYMFAAIAVASGVMVISSRNPVHSVLWLILAFFNAAGLFLLLGAEFLAMVLVIV
CHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVGAVAVLFLFVVMMLDINMVEMKEGFLQYLPTGALIGLVLLVELLAMFGGWAFAPDVEA
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHH
MIKAPTPTLDQASNTVALGKLIYTNYVYLFQASGLVLLVAMIGTILLTHRKRTGVRKQVI
HHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AEQVNRSRDSVELKKVQSGRGI
HHHHHCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8566820 [H]