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The map label for this gene is agmR [H]

Identifier: 83311866

GI number: 83311866

Start: 2952538

End: 2953173

Strand: Reverse

Name: agmR [H]

Synonym: amb2767

Alternate gene names: 83311866

Gene position: 2953173-2952538 (Counterclockwise)

Preceding gene: 83311867

Following gene: 83311857

Centisome position: 59.45

GC content: 61.79

Gene sequence:

>636_bases
ATGAAGGTTCTTCTTGCCGACGATCATGCGTTGTTCCGCGAAGGGGTGCGCATGGTTCTGGAAAGCCTGTCAAACGAGCC
TCTCGATATTGTGGAGGCCTGCGACTTCAATCAGGTACTGACTCTGGTGCGCGGCAACGCCGATTTCGACGTGGCGCTCC
TCGATCTTTCCATGCCGGGGATGGATGGCTTTTCCGCCATTGGGGCCGTGCGGCGTTCTGCTCCCGACATCTATCTTGTG
GTGGTGTCCGCCTCGGAGGAGCCGCAGACGGTGCGCAAGGCCCTCGACAGCGGGGCACACGGCTATATCTGTAAGTCGGC
GGGGTCCGCCTCCATGATGGCCGGCATTCGCTCGGTGCTGGAAGGCGACACCTTCGTCAGCCCCCATATCGTGGTTCCCG
ATACCGCGGCTCCATCCATTGGTGACATCAACGGCGAACAGTTGCAGTCTCTGCTGACGCCGCGTCAGCGCGACGTGCTG
GGCATGTTGCGCCAGGGCAAGTCCAACAAGGAAATTGCCCGCGACCTCAGCCTGGCCGAGATCACCGTGAAGCTGCACGT
GACCGCCATTCTGAGGGCATTGGGCTGCGAGAACCGCACCCAGGCCGCCATCCTTGCCGCCAAGATGGGCGTCTAG

Upstream 100 bases:

>100_bases
AAAAAGGTGGTGCCTATCGCTTTGATGCGGCAGGCACCCGCTCGGTTTGGCCGAGGGGTTCGGTCTGGTCGGGCGGTAAA
CTTATTGGGGATTTTGTGCA

Downstream 100 bases:

>100_bases
AAAGACCCCCTCATCAGCCGACGATCCGCCCGTCCACCAGATGGACGCGGCGGTCGGCTGTCTGCGCCAGTTCGGCATCG
TGAGTGACCACAATGACCGT

Product: response regulator

Products: NA

Alternate protein names: Protein AgmR [H]

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MKVLLADDHALFREGVRMVLESLSNEPLDIVEACDFNQVLTLVRGNADFDVALLDLSMPGMDGFSAIGAVRRSAPDIYLV
VVSASEEPQTVRKALDSGAHGYICKSAGSASMMAGIRSVLEGDTFVSPHIVVPDTAAPSIGDINGEQLQSLLTPRQRDVL
GMLRQGKSNKEIARDLSLAEITVKLHVTAILRALGCENRTQAAILAAKMGV

Sequences:

>Translated_211_residues
MKVLLADDHALFREGVRMVLESLSNEPLDIVEACDFNQVLTLVRGNADFDVALLDLSMPGMDGFSAIGAVRRSAPDIYLV
VVSASEEPQTVRKALDSGAHGYICKSAGSASMMAGIRSVLEGDTFVSPHIVVPDTAAPSIGDINGEQLQSLLTPRQRDVL
GMLRQGKSNKEIARDLSLAEITVKLHVTAILRALGCENRTQAAILAAKMGV
>Mature_211_residues
MKVLLADDHALFREGVRMVLESLSNEPLDIVEACDFNQVLTLVRGNADFDVALLDLSMPGMDGFSAIGAVRRSAPDIYLV
VVSASEEPQTVRKALDSGAHGYICKSAGSASMMAGIRSVLEGDTFVSPHIVVPDTAAPSIGDINGEQLQSLLTPRQRDVL
GMLRQGKSNKEIARDLSLAEITVKLHVTAILRALGCENRTQAAILAAKMGV

Specific function: Positive activator for glycerol metabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1788521, Length=205, Percent_Identity=34.6341463414634, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI1788222, Length=215, Percent_Identity=28.8372093023256, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1787473, Length=203, Percent_Identity=32.512315270936, Blast_Score=84, Evalue=6e-18,
Organism=Escherichia coli, GI1790102, Length=203, Percent_Identity=27.5862068965517, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1786747, Length=193, Percent_Identity=24.8704663212435, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1788546, Length=203, Percent_Identity=25.1231527093596, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 22498; Mature: 22498

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLLADDHALFREGVRMVLESLSNEPLDIVEACDFNQVLTLVRGNADFDVALLDLSMPG
CEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCCC
MDGFSAIGAVRRSAPDIYLVVVSASEEPQTVRKALDSGAHGYICKSAGSASMMAGIRSVL
CCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHH
EGDTFVSPHIVVPDTAAPSIGDINGEQLQSLLTPRQRDVLGMLRQGKSNKEIARDLSLAE
CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCHHHH
ITVKLHVTAILRALGCENRTQAAILAAKMGV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKVLLADDHALFREGVRMVLESLSNEPLDIVEACDFNQVLTLVRGNADFDVALLDLSMPG
CEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCCC
MDGFSAIGAVRRSAPDIYLVVVSASEEPQTVRKALDSGAHGYICKSAGSASMMAGIRSVL
CCHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHH
EGDTFVSPHIVVPDTAAPSIGDINGEQLQSLLTPRQRDVLGMLRQGKSNKEIARDLSLAE
CCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHCHHHH
ITVKLHVTAILRALGCENRTQAAILAAKMGV
HHHHHHHHHHHHHHCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1938886; 10984043 [H]