| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311847
Identifier: 83311847
GI number: 83311847
Start: 2935352
End: 2936176
Strand: Reverse
Name: 83311847
Synonym: amb2748
Alternate gene names: NA
Gene position: 2936176-2935352 (Counterclockwise)
Preceding gene: 83311849
Following gene: 83311846
Centisome position: 59.11
GC content: 62.06
Gene sequence:
>825_bases TTGTCACGGTTGATCACGGTGAGGCGACATGGTTCAATTCCCTCCGGCAATGGCGGAGAAGTGTGCATGGTCTTGGGACC GATGAAGAGCGGTATCGTAGCGGCGGCTCTGGTCTGCCTGGCCGGCTCGCCCACGCTTGCCCGCGATCTGGTGATCGGGG TCGAGGCCATTGACTATTCCCCGGTCTACGGTGTCCGCGATGGGCATTTCCAGGGGGCGGCCCGGGAAATCCTTGACGCC TTTGCCGTGGCCAAGGGGCATCGCCTGACCTTCCAGGCCTTGCCGGTCAAGCGGCTCTATGCCGAATTGGGGCGTGGCGG CATCGATCTCAAATTCCCCGATTCGCCGGATTGGGCACCGGCCCTGCGCCAGGGGCGCAGTCCGGTCTTCTCAAAGCCGG TTATTAACTATATCGATGGCACCATCGTCCGCGCCGAGGTCTCGGCCATGGGGGTCGAGGGGATCCATAGTCTGGGGACC ATCGCCGGCTTCACCCCCTTTGCCTGGGGGGAGCGGCTTAAATCCGGCGCTGTGGAACTCAAGGAAAACTCATCCTTCGA GCAATTATTGCGGCAGGTGCAGACGCGACGCATCGATGGCGCCTATGGAAATGTGGCGGTGGCCCTCAACACGGCCGATT CCATTCCGGGGATGGCTGGGGGGTTGGCCTTTGCCCCCAACCTTCCGCATGTGGTCGACAGCTATCGCCTGTCCTCGGTT GGTGCGCCGGAACTGGTGGCAGAGTTCGACGACTGGTTGGGCAAAAACGGCAAGCTGGTGGCAGAGATCATTGCCCGCAC AGGCGCCGAAAAGGGTATGCACTAG
Upstream 100 bases:
>100_bases TCCGTTTCACCAAATTCTCTCCCCGATCATTCCGATACGCTGCCGAATTCTATTGTCGTCGCTTTGACATGGTGTTGACA ACGGTCAACGGCGTAACGTT
Downstream 100 bases:
>100_bases GCCTCACCAACTTTCGTCATAAATTATGGAAAATTGATACGAGTCGTAGGACTCCTCCCGCTTTGTCTGATGATAATATG ATCAGGTTAAATTGGGAGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSRLITVRRHGSIPSGNGGEVCMVLGPMKSGIVAAALVCLAGSPTLARDLVIGVEAIDYSPVYGVRDGHFQGAAREILDA FAVAKGHRLTFQALPVKRLYAELGRGGIDLKFPDSPDWAPALRQGRSPVFSKPVINYIDGTIVRAEVSAMGVEGIHSLGT IAGFTPFAWGERLKSGAVELKENSSFEQLLRQVQTRRIDGAYGNVAVALNTADSIPGMAGGLAFAPNLPHVVDSYRLSSV GAPELVAEFDDWLGKNGKLVAEIIARTGAEKGMH
Sequences:
>Translated_274_residues MSRLITVRRHGSIPSGNGGEVCMVLGPMKSGIVAAALVCLAGSPTLARDLVIGVEAIDYSPVYGVRDGHFQGAAREILDA FAVAKGHRLTFQALPVKRLYAELGRGGIDLKFPDSPDWAPALRQGRSPVFSKPVINYIDGTIVRAEVSAMGVEGIHSLGT IAGFTPFAWGERLKSGAVELKENSSFEQLLRQVQTRRIDGAYGNVAVALNTADSIPGMAGGLAFAPNLPHVVDSYRLSSV GAPELVAEFDDWLGKNGKLVAEIIARTGAEKGMH >Mature_273_residues SRLITVRRHGSIPSGNGGEVCMVLGPMKSGIVAAALVCLAGSPTLARDLVIGVEAIDYSPVYGVRDGHFQGAAREILDAF AVAKGHRLTFQALPVKRLYAELGRGGIDLKFPDSPDWAPALRQGRSPVFSKPVINYIDGTIVRAEVSAMGVEGIHSLGTI AGFTPFAWGERLKSGAVELKENSSFEQLLRQVQTRRIDGAYGNVAVALNTADSIPGMAGGLAFAPNLPHVVDSYRLSSVG APELVAEFDDWLGKNGKLVAEIIARTGAEKGMH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29018; Mature: 28886
Theoretical pI: Translated: 8.23; Mature: 8.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRLITVRRHGSIPSGNGGEVCMVLGPMKSGIVAAALVCLAGSPTLARDLVIGVEAIDYS CCCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCC PVYGVRDGHFQGAAREILDAFAVAKGHRLTFQALPVKRLYAELGRGGIDLKFPDSPDWAP CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEECCCCCCHHH ALRQGRSPVFSKPVINYIDGTIVRAEVSAMGVEGIHSLGTIAGFTPFAWGERLKSGAVEL HHHCCCCCCCCCCHHHHHCCEEEEEHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCEEE KENSSFEQLLRQVQTRRIDGAYGNVAVALNTADSIPGMAGGLAFAPNLPHVVDSYRLSSV CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHCCC GAPELVAEFDDWLGKNGKLVAEIIARTGAEKGMH CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure SRLITVRRHGSIPSGNGGEVCMVLGPMKSGIVAAALVCLAGSPTLARDLVIGVEAIDYS CCEEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHEEECCC PVYGVRDGHFQGAAREILDAFAVAKGHRLTFQALPVKRLYAELGRGGIDLKFPDSPDWAP CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHCCCCCEEECCCCCCHHH ALRQGRSPVFSKPVINYIDGTIVRAEVSAMGVEGIHSLGTIAGFTPFAWGERLKSGAVEL HHHCCCCCCCCCCHHHHHCCEEEEEHHHHHCHHHHHHHHHHHCCCCHHHHHHHHCCCEEE KENSSFEQLLRQVQTRRIDGAYGNVAVALNTADSIPGMAGGLAFAPNLPHVVDSYRLSSV CCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCEEECCCCCHHHHHHHHCCC GAPELVAEFDDWLGKNGKLVAEIIARTGAEKGMH CCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA