| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is yijE [C]
Identifier: 83311841
GI number: 83311841
Start: 2928641
End: 2929480
Strand: Reverse
Name: yijE [C]
Synonym: amb2742
Alternate gene names: 83311841
Gene position: 2929480-2928641 (Counterclockwise)
Preceding gene: 83311842
Following gene: 83311840
Centisome position: 58.98
GC content: 70.71
Gene sequence:
>840_bases ATGGTGGCGCCGCGCACCTGGGGGTTGACGGCGATTACCATGGTGGCCTTCGCCGCCAATTCCCTGCTGTGCCGCGAGGC CCTGCGCCACACCGCCATTGACCCCGCCAGCTTCACCTTGATTCGCGTTGCTTCGGGTGCCGCGATTCTGGCCCTGTTGG TCCGGCTGCGCCACGGCGCGGCGCGGGGAGGGAACTGGGGCTCGGCCCTGGCCCTGGCGGGCTATGCCGTGGCCTTCTCC TTCGCCTATCTGTCGCTGTCGGCCGGAACCGGCGCCCTGCTGCTGTTCGGTGCGGTACAGATGACCATGATCGGCCGCGG CCTGATGGCCGGGGAGCGTTTTCGGCCGCTCCAGACTGTCGGGTTGCTGCTGGCGGTCGGTGGGCTGGTGGTTCTGCTTC TGCCCGGCGTGACCGCGCCCGAGCCGGTGGGCGCCGGCCTGATGGTCGTGGCCGGCGTGGCCTGGGGCATCTATTCTCTG CGGGGGCGTCGGGAAAGCGATGCTTTGGCCGCGAATGCCGGCAATTTTCTGCGCGGCGTGCCTCTGGCGGCCCTGGCCTG TCTGGCCGTGGTGACGGTGGGCGAACCCCGGATCGATGGTCCGGGGCTGGCCTATGCCCTGGCCTCGGGCGGCGTGGCCT CGGGACTGGGCTACGCTTTGTGGTATGTGGCGGTGCGCGGCCTGCCGGCCACCCATGCCGCCACGGTACAGCTTAGCGTG CCTGTGATCACTGCCCTGGCCGGGGCGGCTCTGCTGGGAGAGAGCCTCAGTCTGCGCCTTGCCCTGGCGTCGCTGGCGGT GCTGGGCGGCATTGCCCTGGTGGTGGTGCGGCGGCGGTGA
Upstream 100 bases:
>100_bases ATCGAGGAGATGGTGGGGCAGTTGATCTTCCTGGCCACCACCGATAATCAACCGTCCGCGCCGCCGTCACCCGCCGCTCC CCGGGATTAGGGCTGGAGCG
Downstream 100 bases:
>100_bases CGGCCCGGTGGACAGCGGGGGGCGGAAAAGGCAGGATTGCCGGAAACAAGGAGACGATGATGCGGCGAGTATTGGTGGTG GCGGCGTTGGTGACGGCGGT
Product: DMT family permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGAARGGNWGSALALAGYAVAFS FAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTVGLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSL RGRRESDALAANAGNFLRGVPLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR
Sequences:
>Translated_279_residues MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGAARGGNWGSALALAGYAVAFS FAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTVGLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSL RGRRESDALAANAGNFLRGVPLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR >Mature_279_residues MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGAARGGNWGSALALAGYAVAFS FAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTVGLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSL RGRRESDALAANAGNFLRGVPLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 DUF6 domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 28168; Mature: 28168
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCC ARGGNWGSALALAGYAVAFSFAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTV CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSLRGRRESDALAANAGNFLRGV HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCC PLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV HHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEH PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCC ARGGNWGSALALAGYAVAFSFAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTV CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH GLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSLRGRRESDALAANAGNFLRGV HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCC PLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV HHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEH PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10984043; 1938886 [H]