Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is yijE [C]

Identifier: 83311841

GI number: 83311841

Start: 2928641

End: 2929480

Strand: Reverse

Name: yijE [C]

Synonym: amb2742

Alternate gene names: 83311841

Gene position: 2929480-2928641 (Counterclockwise)

Preceding gene: 83311842

Following gene: 83311840

Centisome position: 58.98

GC content: 70.71

Gene sequence:

>840_bases
ATGGTGGCGCCGCGCACCTGGGGGTTGACGGCGATTACCATGGTGGCCTTCGCCGCCAATTCCCTGCTGTGCCGCGAGGC
CCTGCGCCACACCGCCATTGACCCCGCCAGCTTCACCTTGATTCGCGTTGCTTCGGGTGCCGCGATTCTGGCCCTGTTGG
TCCGGCTGCGCCACGGCGCGGCGCGGGGAGGGAACTGGGGCTCGGCCCTGGCCCTGGCGGGCTATGCCGTGGCCTTCTCC
TTCGCCTATCTGTCGCTGTCGGCCGGAACCGGCGCCCTGCTGCTGTTCGGTGCGGTACAGATGACCATGATCGGCCGCGG
CCTGATGGCCGGGGAGCGTTTTCGGCCGCTCCAGACTGTCGGGTTGCTGCTGGCGGTCGGTGGGCTGGTGGTTCTGCTTC
TGCCCGGCGTGACCGCGCCCGAGCCGGTGGGCGCCGGCCTGATGGTCGTGGCCGGCGTGGCCTGGGGCATCTATTCTCTG
CGGGGGCGTCGGGAAAGCGATGCTTTGGCCGCGAATGCCGGCAATTTTCTGCGCGGCGTGCCTCTGGCGGCCCTGGCCTG
TCTGGCCGTGGTGACGGTGGGCGAACCCCGGATCGATGGTCCGGGGCTGGCCTATGCCCTGGCCTCGGGCGGCGTGGCCT
CGGGACTGGGCTACGCTTTGTGGTATGTGGCGGTGCGCGGCCTGCCGGCCACCCATGCCGCCACGGTACAGCTTAGCGTG
CCTGTGATCACTGCCCTGGCCGGGGCGGCTCTGCTGGGAGAGAGCCTCAGTCTGCGCCTTGCCCTGGCGTCGCTGGCGGT
GCTGGGCGGCATTGCCCTGGTGGTGGTGCGGCGGCGGTGA

Upstream 100 bases:

>100_bases
ATCGAGGAGATGGTGGGGCAGTTGATCTTCCTGGCCACCACCGATAATCAACCGTCCGCGCCGCCGTCACCCGCCGCTCC
CCGGGATTAGGGCTGGAGCG

Downstream 100 bases:

>100_bases
CGGCCCGGTGGACAGCGGGGGGCGGAAAAGGCAGGATTGCCGGAAACAAGGAGACGATGATGCGGCGAGTATTGGTGGTG
GCGGCGTTGGTGACGGCGGT

Product: DMT family permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGAARGGNWGSALALAGYAVAFS
FAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTVGLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSL
RGRRESDALAANAGNFLRGVPLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV
PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR

Sequences:

>Translated_279_residues
MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGAARGGNWGSALALAGYAVAFS
FAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTVGLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSL
RGRRESDALAANAGNFLRGVPLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV
PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR
>Mature_279_residues
MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGAARGGNWGSALALAGYAVAFS
FAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTVGLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSL
RGRRESDALAANAGNFLRGVPLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV
PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 28168; Mature: 28168

Theoretical pI: Translated: 11.59; Mature: 11.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCC
ARGGNWGSALALAGYAVAFSFAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSLRGRRESDALAANAGNFLRGV
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCC
PLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV
HHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEH
PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MVAPRTWGLTAITMVAFAANSLLCREALRHTAIDPASFTLIRVASGAAILALLVRLRHGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHCC
ARGGNWGSALALAGYAVAFSFAYLSLSAGTGALLLFGAVQMTMIGRGLMAGERFRPLQTV
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
GLLLAVGGLVVLLLPGVTAPEPVGAGLMVVAGVAWGIYSLRGRRESDALAANAGNFLRGV
HHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHCC
PLAALACLAVVTVGEPRIDGPGLAYALASGGVASGLGYALWYVAVRGLPATHAATVQLSV
HHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEH
PVITALAGAALLGESLSLRLALASLAVLGGIALVVVRRR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043; 1938886 [H]