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The map label for this gene is napF [H]

Identifier: 83311791

GI number: 83311791

Start: 2884114

End: 2884644

Strand: Reverse

Name: napF [H]

Synonym: amb2692

Alternate gene names: 83311791

Gene position: 2884644-2884114 (Counterclockwise)

Preceding gene: 83311792

Following gene: 83311790

Centisome position: 58.07

GC content: 68.36

Gene sequence:

>531_bases
ATGTCTGGGCTAATGTCCCGGCGGACGTTGTTGACGAGGCGCACCGAGAGCCGGGCGCCGTCGGGTCCTCGTCCGCCCTG
GAGCATCGAGACCTTCGACGTCGCCTGTGACGGTTGCGGCGCCTGCCTTTCCTCCTGTCCCGAACATATTCTCGCCAAGG
GCGCCGATGGTCGGCCCGTTGTGGATTTCGCCCGTGGCGGCTGCACCTTCTGCGGCGATTGCGACACCGCCTGCGTCCCC
CGCGAGGGACGGCCGGCGGCCATCGACCGCGCTTTGTCCGCCCGCGCCTCGTCCCATGGCGCCGACCGCTTGCCGGTGCT
GGCGCGGCTGGGGGCGTCCTGCATTTCCATCCAGGGTGTGACCTGCCGCCTGTGCGGCGACCCCTGCGATGTCCGCGCCA
TCAAGTTCAGGCCATTGCCGGGCGGCCGCGTGCTGCCCGAGATTGCCGAAGAGTCCTGTAATGGTTGTGGAATTTGCGTC
TCGGCCTGTCCGGTCGGCGCGCTGTCCATGGCACCTTTGGTTCGAGCCTGA

Upstream 100 bases:

>100_bases
CTTTTGACCAACGTCAAAGCGCCTGAGTCAGTGCGGTGACACCTTTCCGTCATCTGGCGCCGCCCCTGGGGAGAGGGGGC
ATGCCGAGGGAGGGATTCCG

Downstream 100 bases:

>100_bases
GAGGGAAGGGAATGAGACTCGCGACCTTCGTTGCCACCGAGCAATCCAAGCCCAGGGAGCAGGTGGAGAACATCTGCGGC
GTATTAATCCACGTCAAGCC

Product: ferredoxin

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MSGLMSRRTLLTRRTESRAPSGPRPPWSIETFDVACDGCGACLSSCPEHILAKGADGRPVVDFARGGCTFCGDCDTACVP
REGRPAAIDRALSARASSHGADRLPVLARLGASCISIQGVTCRLCGDPCDVRAIKFRPLPGGRVLPEIAEESCNGCGICV
SACPVGALSMAPLVRA

Sequences:

>Translated_176_residues
MSGLMSRRTLLTRRTESRAPSGPRPPWSIETFDVACDGCGACLSSCPEHILAKGADGRPVVDFARGGCTFCGDCDTACVP
REGRPAAIDRALSARASSHGADRLPVLARLGASCISIQGVTCRLCGDPCDVRAIKFRPLPGGRVLPEIAEESCNGCGICV
SACPVGALSMAPLVRA
>Mature_175_residues
SGLMSRRTLLTRRTESRAPSGPRPPWSIETFDVACDGCGACLSSCPEHILAKGADGRPVVDFARGGCTFCGDCDTACVPR
EGRPAAIDRALSARASSHGADRLPVLARLGASCISIQGVTCRLCGDPCDVRAIKFRPLPGGRVLPEIAEESCNGCGICVS
ACPVGALSMAPLVRA

Specific function: Involved in electron transfer [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788536, Length=170, Percent_Identity=37.0588235294118, Blast_Score=105, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR004496 [H]

Pfam domain/function: PF00037 Fer4 [H]

EC number: NA

Molecular weight: Translated: 18259; Mature: 18128

Theoretical pI: Translated: 8.00; Mature: 8.00

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

9.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
9.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
10.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLMSRRTLLTRRTESRAPSGPRPPWSIETFDVACDGCGACLSSCPEHILAKGADGRPV
CCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCE
VDFARGGCTFCGDCDTACVPREGRPAAIDRALSARASSHGADRLPVLARLGASCISIQGV
EEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCC
TCRLCGDPCDVRAIKFRPLPGGRVLPEIAEESCNGCGICVSACPVGALSMAPLVRA
EEEECCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEHHHCCCCHHHCCHHHCC
>Mature Secondary Structure 
SGLMSRRTLLTRRTESRAPSGPRPPWSIETFDVACDGCGACLSSCPEHILAKGADGRPV
CCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCE
VDFARGGCTFCGDCDTACVPREGRPAAIDRALSARASSHGADRLPVLARLGASCISIQGV
EEECCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCEEEECCC
TCRLCGDPCDVRAIKFRPLPGGRVLPEIAEESCNGCGICVSACPVGALSMAPLVRA
EEEECCCCCCEEEEEEECCCCCCCCHHHHHHCCCCCEEEHHHCCCCHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]