| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311755
Identifier: 83311755
GI number: 83311755
Start: 2846910
End: 2848454
Strand: Reverse
Name: 83311755
Synonym: amb2656
Alternate gene names: NA
Gene position: 2848454-2846910 (Counterclockwise)
Preceding gene: 83311758
Following gene: 83311751
Centisome position: 57.35
GC content: 63.37
Gene sequence:
>1545_bases GTGGCCCGAGCGGTCTGGTTGGCCAGGGTCTTGACCTCGTTGGCGACAACGGCGAAACCCTTGCCGGCGTCGCCGGCCCG GGCTGCTTCGATGGTGGCGTTGAGCGCCAGCAGGTTGGTCTGCGACGCGATGTCGTTGATCAGGGCCACCACGGTGCCGA TCTTGCCCACCGCCTCGGCCAGGCTGTTGATCAGGGTGGTGGTGCGGATAGCTTCGGCCGAGGCGTCGCCCGCCACGCTC ACAGAGAGGGCGACGCGCTGGCTGATGTCCTCGCCCGATACGGCCAGCTGCTCGGCCGAGCCCGCGGCGGTGCGCATGTT GACGGCGGTCTCCTCGATGGCCGAGGCCACGGCCGTGGCCTGGGCCGAGGCCCCTTGGGCCGTGTCCGACAGGGCGCGCG AAGTGGCTTCCAACTGTTCGGCGGTATCCGCCATGCCGCGCAGGGATTCCGTCACCTCCTCGTTGAATTCCTTGAGGAGG TTGTCGACGACGCGGGCTCGCCTGTCCTTTGTCCACTCCGCCTCGCGCTGCTCGGCGGCCAATTGTTCGGCACGGATCAG GCCTTCCTTGAAAATCTCGACGGTGCGGGCCATGTCGCCGACTTCGTCCTTGCGGGACTGGGCGGGAACCTCCCTTTGGA ATTCCTTGCGGGACAGCTCGGCCATAACGGTGGAAAGATTGACCAGCGGACGGGTGATGCGTCGTGCCACCAGGATGGAG ACGGCGATGACCAGTGTCGGTCAGCAGCACCACGCCCAGGCCGCACTACAGGGCGCTGGACCAGAAGGCAGCGTCCACGT CGTCCAGGTAGATGCCGGTGCCGACCACCCAGCCCCAGCCGGGGTTGAGCTTGACGTAGGAGACCTTGCGCACCGGCTTG GGGGAGCCGGGCTTGGGCCAGTCGTAGTAATGGAAGTCGGCCCCCCGGGCCTTGACCAACTCGTTCATGCGCACGAACAG CGGCTGCCCGTTGGCATCCTTCATGTCGCCGACGCTGGCGCCGTCCAGATCCGGCTTGATGGGGTGCATGACCATGTGGC CGCCAAGATCATGAATCCAGAAATAGTCGTTGTCGCCATAGCGAAGGGCGGCGACGTCGCGGCGGGCGGCGGCCTTGGCG TCGACCTCGGGCAGGCGGCCCGCCTTGGCATCGGCCTCGTAGGCGGCGATGATGCCGGCGGCACTGTCGACCAGATCCTT GACCTTGGTCTTGCGTCCGGACAATACCTCCCCATTCAGCATGTCCAGTGCGCCGACAAAGATCAGGCACATGCCGAAGA AGGCTGCTGCCACGATCAATCCGATTTTTGTTCCAATTCGCCTGTCGTCAAGCCACGTCATGACCGCCCTCGAGTCAATA TGTCCAGTTGCTGCGCTGCAACTAAATCGCAACGGGCAGCATATGTCAAACGTTGGACGGGGATCGACGCAGAGGAAATA TCGTTGTCACGGATTGTTACAAAATCAAGGTGTGACGTTGGCGGGGAGGGGATAGACAACATTCTGCCAGACGATCTTAA TTTCATTGAGCGTATATTAGGGTAA
Upstream 100 bases:
>100_bases GTCCCGGATGCGTTCGATCACCGCCGAGATGGATCCGATGGCGGTCACCGCCTCGCCGGTGACCCGTTGAACCGTGGCGA TCTGCGAGGCGATCTCGTCA
Downstream 100 bases:
>100_bases GACGCTATGCGGTTCGTCTAGGTATGAAGTCGTGGGCGAAACATGTTTTTTTTATGCGTGATTATCTGTGGCCTATCCCT TTCCGTCAGGGTCAGGTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 514; Mature: 513
Protein sequence:
>514_residues MARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASARLLIRVVVRIASAEASPATL TERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVAWAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRR LSTTRARLSFVHSASRCSAANCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRME TAMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGPVVVMEVGPPGLDQLVHAHEQ RLPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAIAKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQIL DLGLASGQYLPIQHVQCADKDQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEI SLSRIVTKSRCDVGGEGIDNILPDDLNFIERILG
Sequences:
>Translated_514_residues MARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASARLLIRVVVRIASAEASPATL TERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVAWAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRR LSTTRARLSFVHSASRCSAANCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRME TAMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGPVVVMEVGPPGLDQLVHAHEQ RLPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAIAKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQIL DLGLASGQYLPIQHVQCADKDQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEI SLSRIVTKSRCDVGGEGIDNILPDDLNFIERILG >Mature_513_residues ARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASARLLIRVVVRIASAEASPATLT ERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVAWAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRRL STTRARLSFVHSASRCSAANCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRMET AMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGPVVVMEVGPPGLDQLVHAHEQR LPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAIAKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQILD LGLASGQYLPIQHVQCADKDQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEIS LSRIVTKSRCDVGGEGIDNILPDDLNFIERILG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53711; Mature: 53580
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASA CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RLLIRVVVRIASAEASPATLTERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRRLSTTRARLSFVHSASRCSAA HCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRME CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHH TAMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGP HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCCC VVVMEVGPPGLDQLVHAHEQRLPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAI EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCCCEEEEEE AKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQILDLGLASGQYLPIQHVQCADK ECCCCEECCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC DQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEI HHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH SLSRIVTKSRCDVGGEGIDNILPDDLNFIERILG HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC >Mature Secondary Structure ARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASA CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH RLLIRVVVRIASAEASPATLTERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH WAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRRLSTTRARLSFVHSASRCSAA HCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRME CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHH TAMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGP HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCCC VVVMEVGPPGLDQLVHAHEQRLPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAI EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCCCEEEEEE AKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQILDLGLASGQYLPIQHVQCADK ECCCCEECCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC DQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEI HHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH SLSRIVTKSRCDVGGEGIDNILPDDLNFIERILG HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA