Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83311755

Identifier: 83311755

GI number: 83311755

Start: 2846910

End: 2848454

Strand: Reverse

Name: 83311755

Synonym: amb2656

Alternate gene names: NA

Gene position: 2848454-2846910 (Counterclockwise)

Preceding gene: 83311758

Following gene: 83311751

Centisome position: 57.35

GC content: 63.37

Gene sequence:

>1545_bases
GTGGCCCGAGCGGTCTGGTTGGCCAGGGTCTTGACCTCGTTGGCGACAACGGCGAAACCCTTGCCGGCGTCGCCGGCCCG
GGCTGCTTCGATGGTGGCGTTGAGCGCCAGCAGGTTGGTCTGCGACGCGATGTCGTTGATCAGGGCCACCACGGTGCCGA
TCTTGCCCACCGCCTCGGCCAGGCTGTTGATCAGGGTGGTGGTGCGGATAGCTTCGGCCGAGGCGTCGCCCGCCACGCTC
ACAGAGAGGGCGACGCGCTGGCTGATGTCCTCGCCCGATACGGCCAGCTGCTCGGCCGAGCCCGCGGCGGTGCGCATGTT
GACGGCGGTCTCCTCGATGGCCGAGGCCACGGCCGTGGCCTGGGCCGAGGCCCCTTGGGCCGTGTCCGACAGGGCGCGCG
AAGTGGCTTCCAACTGTTCGGCGGTATCCGCCATGCCGCGCAGGGATTCCGTCACCTCCTCGTTGAATTCCTTGAGGAGG
TTGTCGACGACGCGGGCTCGCCTGTCCTTTGTCCACTCCGCCTCGCGCTGCTCGGCGGCCAATTGTTCGGCACGGATCAG
GCCTTCCTTGAAAATCTCGACGGTGCGGGCCATGTCGCCGACTTCGTCCTTGCGGGACTGGGCGGGAACCTCCCTTTGGA
ATTCCTTGCGGGACAGCTCGGCCATAACGGTGGAAAGATTGACCAGCGGACGGGTGATGCGTCGTGCCACCAGGATGGAG
ACGGCGATGACCAGTGTCGGTCAGCAGCACCACGCCCAGGCCGCACTACAGGGCGCTGGACCAGAAGGCAGCGTCCACGT
CGTCCAGGTAGATGCCGGTGCCGACCACCCAGCCCCAGCCGGGGTTGAGCTTGACGTAGGAGACCTTGCGCACCGGCTTG
GGGGAGCCGGGCTTGGGCCAGTCGTAGTAATGGAAGTCGGCCCCCCGGGCCTTGACCAACTCGTTCATGCGCACGAACAG
CGGCTGCCCGTTGGCATCCTTCATGTCGCCGACGCTGGCGCCGTCCAGATCCGGCTTGATGGGGTGCATGACCATGTGGC
CGCCAAGATCATGAATCCAGAAATAGTCGTTGTCGCCATAGCGAAGGGCGGCGACGTCGCGGCGGGCGGCGGCCTTGGCG
TCGACCTCGGGCAGGCGGCCCGCCTTGGCATCGGCCTCGTAGGCGGCGATGATGCCGGCGGCACTGTCGACCAGATCCTT
GACCTTGGTCTTGCGTCCGGACAATACCTCCCCATTCAGCATGTCCAGTGCGCCGACAAAGATCAGGCACATGCCGAAGA
AGGCTGCTGCCACGATCAATCCGATTTTTGTTCCAATTCGCCTGTCGTCAAGCCACGTCATGACCGCCCTCGAGTCAATA
TGTCCAGTTGCTGCGCTGCAACTAAATCGCAACGGGCAGCATATGTCAAACGTTGGACGGGGATCGACGCAGAGGAAATA
TCGTTGTCACGGATTGTTACAAAATCAAGGTGTGACGTTGGCGGGGAGGGGATAGACAACATTCTGCCAGACGATCTTAA
TTTCATTGAGCGTATATTAGGGTAA

Upstream 100 bases:

>100_bases
GTCCCGGATGCGTTCGATCACCGCCGAGATGGATCCGATGGCGGTCACCGCCTCGCCGGTGACCCGTTGAACCGTGGCGA
TCTGCGAGGCGATCTCGTCA

Downstream 100 bases:

>100_bases
GACGCTATGCGGTTCGTCTAGGTATGAAGTCGTGGGCGAAACATGTTTTTTTTATGCGTGATTATCTGTGGCCTATCCCT
TTCCGTCAGGGTCAGGTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASARLLIRVVVRIASAEASPATL
TERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVAWAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRR
LSTTRARLSFVHSASRCSAANCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRME
TAMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGPVVVMEVGPPGLDQLVHAHEQ
RLPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAIAKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQIL
DLGLASGQYLPIQHVQCADKDQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEI
SLSRIVTKSRCDVGGEGIDNILPDDLNFIERILG

Sequences:

>Translated_514_residues
MARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASARLLIRVVVRIASAEASPATL
TERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVAWAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRR
LSTTRARLSFVHSASRCSAANCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRME
TAMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGPVVVMEVGPPGLDQLVHAHEQ
RLPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAIAKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQIL
DLGLASGQYLPIQHVQCADKDQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEI
SLSRIVTKSRCDVGGEGIDNILPDDLNFIERILG
>Mature_513_residues
ARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASARLLIRVVVRIASAEASPATLT
ERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVAWAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRRL
STTRARLSFVHSASRCSAANCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRMET
AMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGPVVVMEVGPPGLDQLVHAHEQR
LPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAIAKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQILD
LGLASGQYLPIQHVQCADKDQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEIS
LSRIVTKSRCDVGGEGIDNILPDDLNFIERILG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53711; Mature: 53580

Theoretical pI: Translated: 7.90; Mature: 7.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASA
CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RLLIRVVVRIASAEASPATLTERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRRLSTTRARLSFVHSASRCSAA
HCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRME
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHH
TAMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGP
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCCC
VVVMEVGPPGLDQLVHAHEQRLPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAI
EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCCCEEEEEE
AKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQILDLGLASGQYLPIQHVQCADK
ECCCCEECCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
DQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEI
HHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
SLSRIVTKSRCDVGGEGIDNILPDDLNFIERILG
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC
>Mature Secondary Structure 
ARAVWLARVLTSLATTAKPLPASPARAASMVALSASRLVCDAMSLIRATTVPILPTASA
CHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH
RLLIRVVVRIASAEASPATLTERATRWLMSSPDTASCSAEPAAVRMLTAVSSMAEATAVA
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
WAEAPWAVSDRAREVASNCSAVSAMPRRDSVTSSLNSLRRLSTTRARLSFVHSASRCSAA
HCCCCCCHHHHHHHHHHCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
NCSARIRPSLKISTVRAMSPTSSLRDWAGTSLWNSLRDSSAITVERLTSGRVMRRATRME
CCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEHHHHHCCHHHHHHHHHH
TAMTSVGQQHHAQAALQGAGPEGSVHVVQVDAGADHPAPAGVELDVGDLAHRLGGAGLGP
HHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEHHHHHHHHCCCCCCC
VVVMEVGPPGLDQLVHAHEQRLPVGILHVADAGAVQIRLDGVHDHVAAKIMNPEIVVVAI
EEEEECCCCCHHHHHHHHHHCCCEEEEEECCCCEEEEEECCCHHHHHHHCCCCCEEEEEE
AKGGDVAAGGGLGVDLGQAARLGIGLVGGDDAGGTVDQILDLGLASGQYLPIQHVQCADK
ECCCCEECCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
DQAHAEEGCCHDQSDFCSNSPVVKPRHDRPRVNMSSCCAATKSQRAAYVKRWTGIDAEEI
HHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHH
SLSRIVTKSRCDVGGEGIDNILPDDLNFIERILG
HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA