| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311746
Identifier: 83311746
GI number: 83311746
Start: 2836000
End: 2836374
Strand: Reverse
Name: 83311746
Synonym: amb2647
Alternate gene names: NA
Gene position: 2836374-2836000 (Counterclockwise)
Preceding gene: 83311747
Following gene: 83311745
Centisome position: 57.1
GC content: 64.8
Gene sequence:
>375_bases ATGAACATCAAGAGCCTCACCGTCCTCGCCGCCGCGTTGCTCGTCAGCGCCGCCGCCTATGCCGCCCCGGTCAAGACCGG CCAGTCCGCGTTGGGTCCGGTACTGACTAATGAAAAGGGCATGACCCTTTACACCTTCGACAAGGATGCCCCCGGCACCT CGACCTGCGTCGACGCCTGCGCCCAGAACTGGCCGCCGCTGATGGCCGCTTCCGGAGCCATGGCCGAGGGCGACTACACG GTGATCAAGCGGGCCGACGGCTCCATGCAATGGGCCTACAAGGGCAAGCCGCTCTACACCTGGATGAAGGATGCCAAGCC GGGCGACACCACCGGCGAAGGCTTCAAGGATATTTGGCACGCGGCCAAGCCGTAG
Upstream 100 bases:
>100_bases GCTGATGACCGGCTGAATTTATTTTTCGGCCCAGGGAATAATCCCGGCCGCCCGGCGTTCTCTCCAGTGTGGCCCATGTG GAGCCATCCTGGAGGGAACC
Downstream 100 bases:
>100_bases CCATCTATCTCCCATGAATACGGTGGAGAGCCAGATCGAGGCGGAGATCCCAGGGCTGCGGCGCTATGCCCGCGCCCTGT CCGGGGATGTGACGCAGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Secreted Repeat-Containing Protein; Exported Protein; Blue Copper Domain Protein; Signal Peptide Protein; Secreted Repeat Protein; Exported Lipoprotein; Secreted Protein
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNIKSLTVLAAALLVSAAAYAAPVKTGQSALGPVLTNEKGMTLYTFDKDAPGTSTCVDACAQNWPPLMAASGAMAEGDYT VIKRADGSMQWAYKGKPLYTWMKDAKPGDTTGEGFKDIWHAAKP
Sequences:
>Translated_124_residues MNIKSLTVLAAALLVSAAAYAAPVKTGQSALGPVLTNEKGMTLYTFDKDAPGTSTCVDACAQNWPPLMAASGAMAEGDYT VIKRADGSMQWAYKGKPLYTWMKDAKPGDTTGEGFKDIWHAAKP >Mature_124_residues MNIKSLTVLAAALLVSAAAYAAPVKTGQSALGPVLTNEKGMTLYTFDKDAPGTSTCVDACAQNWPPLMAASGAMAEGDYT VIKRADGSMQWAYKGKPLYTWMKDAKPGDTTGEGFKDIWHAAKP
Specific function: Unknown
COG id: COG4315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13089; Mature: 13089
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKSLTVLAAALLVSAAAYAAPVKTGQSALGPVLTNEKGMTLYTFDKDAPGTSTCVDAC CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCCEEEEECCCCCCHHHHHHHH AQNWPPLMAASGAMAEGDYTVIKRADGSMQWAYKGKPLYTWMKDAKPGDTTGEGFKDIWH HCCCCCCEECCCCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHH AAKP CCCC >Mature Secondary Structure MNIKSLTVLAAALLVSAAAYAAPVKTGQSALGPVLTNEKGMTLYTFDKDAPGTSTCVDAC CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCEEECCCCCEEEEECCCCCCHHHHHHHH AQNWPPLMAASGAMAEGDYTVIKRADGSMQWAYKGKPLYTWMKDAKPGDTTGEGFKDIWH HCCCCCCEECCCCCCCCCEEEEEECCCCEEEEECCCCEEEECCCCCCCCCCCCHHHHHHH AAKP CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA