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The map label for this gene is 83311685

Identifier: 83311685

GI number: 83311685

Start: 2772585

End: 2773262

Strand: Reverse

Name: 83311685

Synonym: amb2586

Alternate gene names: NA

Gene position: 2773262-2772585 (Counterclockwise)

Preceding gene: 83311686

Following gene: 83311684

Centisome position: 55.83

GC content: 64.6

Gene sequence:

>678_bases
ATGGACAACAAGCCGGGCACGGTTCACGACGTCAAGGCCCAGGTTGCCGACGAGGCGCTGGTGGCCCGGCGGCGCGGCCA
GATCATCGCGGCGGCGGTGGAGTTGTTCTCCCACCAGGGCTTTTACCGCACCACCATTCAGGACGTGGCCAAGAAGGCCG
GGGTGTCCGCCGGGCTGATCTATCAATATGTCAGCGACAAGGAGGACGTGCTGCTGCTCGCCCTGCTGTCGGTGCTGGAA
TCCTACAAGCACGAAATTCCGGCGGCGCTGGAGGGGCTTTCCGATCCGCTGGAGCGTTTCGTCGCCGCCATCCGGGCCTA
TTGCCGGGTGGTGGACCAGCGGCGCGAAGCCACCGTGCTGGCCTACCGCTCCACCAAGTCGCTGCCCGACGACCGCCGCC
AGCTGATCAAGGACTGCGAGATCGAGACCAACGGCATGATCGCCGCCTGCCTCGCCGATTGCATCAAGGCGGGCCTGATG
CGTGAGGTGAACGTGGAACTGGTAACCTACCAGCTGGTGACCTTCGCCCATTCCTGGGCGCTGAAGCATTGGCGGCTCAA
GGAATTGTGCGGCCTGGAGCAATATGTGGCGGAGGGCCTGGATTTCTTCGCCCAGGCCCTGCTGACCCCCAAGGGGCGGC
GGCAGTGGGAAAAGCTCGGCGTCACCACGATCTGTTGA

Upstream 100 bases:

>100_bases
CATCACCGGCCAGAGCATCGCCGTGGCGGGCGGGGAGTTGATGTAGGGACCGGGAGGTGGTTTATAGGGCGATGGTCGAG
GAAGAGGGGTAGGACGGGCA

Downstream 100 bases:

>100_bases
CGCCTCCCCCTCTTTGAGTACTATATCTGGCTCAAATTCCGAGGGGACCCCATGACCAAGCCCGCCGTCACCGGCGATAT
CCGCGACACGCCGCTTGCCG

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR/AcrR Family Transcriptional Regulator; Transcription Regulator; Regulatory Protein TetR; TetR Family Regulatory Protein

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MDNKPGTVHDVKAQVADEALVARRRGQIIAAAVELFSHQGFYRTTIQDVAKKAGVSAGLIYQYVSDKEDVLLLALLSVLE
SYKHEIPAALEGLSDPLERFVAAIRAYCRVVDQRREATVLAYRSTKSLPDDRRQLIKDCEIETNGMIAACLADCIKAGLM
REVNVELVTYQLVTFAHSWALKHWRLKELCGLEQYVAEGLDFFAQALLTPKGRRQWEKLGVTTIC

Sequences:

>Translated_225_residues
MDNKPGTVHDVKAQVADEALVARRRGQIIAAAVELFSHQGFYRTTIQDVAKKAGVSAGLIYQYVSDKEDVLLLALLSVLE
SYKHEIPAALEGLSDPLERFVAAIRAYCRVVDQRREATVLAYRSTKSLPDDRRQLIKDCEIETNGMIAACLADCIKAGLM
REVNVELVTYQLVTFAHSWALKHWRLKELCGLEQYVAEGLDFFAQALLTPKGRRQWEKLGVTTIC
>Mature_225_residues
MDNKPGTVHDVKAQVADEALVARRRGQIIAAAVELFSHQGFYRTTIQDVAKKAGVSAGLIYQYVSDKEDVLLLALLSVLE
SYKHEIPAALEGLSDPLERFVAAIRAYCRVVDQRREATVLAYRSTKSLPDDRRQLIKDCEIETNGMIAACLADCIKAGLM
REVNVELVTYQLVTFAHSWALKHWRLKELCGLEQYVAEGLDFFAQALLTPKGRRQWEKLGVTTIC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25210; Mature: 25210

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKPGTVHDVKAQVADEALVARRRGQIIAAAVELFSHQGFYRTTIQDVAKKAGVSAGLI
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
YQYVSDKEDVLLLALLSVLESYKHEIPAALEGLSDPLERFVAAIRAYCRVVDQRREATVL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
AYRSTKSLPDDRRQLIKDCEIETNGMIAACLADCIKAGLMREVNVELVTYQLVTFAHSWA
EECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LKHWRLKELCGLEQYVAEGLDFFAQALLTPKGRRQWEKLGVTTIC
HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MDNKPGTVHDVKAQVADEALVARRRGQIIAAAVELFSHQGFYRTTIQDVAKKAGVSAGLI
CCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHH
YQYVSDKEDVLLLALLSVLESYKHEIPAALEGLSDPLERFVAAIRAYCRVVDQRREATVL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE
AYRSTKSLPDDRRQLIKDCEIETNGMIAACLADCIKAGLMREVNVELVTYQLVTFAHSWA
EECCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LKHWRLKELCGLEQYVAEGLDFFAQALLTPKGRRQWEKLGVTTIC
HHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA