| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is tag [H]
Identifier: 83311673
GI number: 83311673
Start: 2759273
End: 2759845
Strand: Reverse
Name: tag [H]
Synonym: amb2574
Alternate gene names: 83311673
Gene position: 2759845-2759273 (Counterclockwise)
Preceding gene: 83311674
Following gene: 83311672
Centisome position: 55.56
GC content: 64.75
Gene sequence:
>573_bases GTGGCCGAGGAGAAACAAATGTCTTGGTATTGCGACGTCGCGCCCGGCCATCCGTTCCACGGTCCCTATCATGACCGGGA ATACGGCTTTCCCGTTGCCGACGAAGCGGTGCTGTTCGAGCGCCTTTGCCTGGAGATCTTTCAGGCGGGGTTATCCTGGC TGATCGTGCTGAAGAAGCGCCCGGCCATGGCGGCGGCCTTCGACGGTTTCGAGGTGGACAAGGTGGCCGCCTATGGCGAG GCCGAGCTGGAACGGCTGATGAATGATTCCGGCATCATCCGCAACCGCCGCAAGCTGGCCGCCATCGTCGAGAATGCCCG TCGGCTGCAGGCCCTGCGGGCGCGCGAGGGCAGTTTCGCCGCCTGGCTGGCGCGGCACCATCCCCTGACCAAGGATGGCT GGGTCAAGCTGTTCAAGGCCACGTTCGTCTTCGTGGGCGGTGAGGTGGTGGGGGAGTTTCTGATGAGCATCGGCTACCTG CCGGGAGGCCATCGCGAGGATTGCCCGGTCCAGGCGCGGCTTCGCGCTGCCGGCGCACCCTGCTTCGCGGTCGATCCCGC TTTTTATGCTTGA
Upstream 100 bases:
>100_bases TCCTGCACCCCAAGGATTTCAACGGCACCCTGGTCGAGCTGGAACAGGCTTAGCCGGACTCCAACCCTCCTCGGCCACGC GGGGGTGGCGGGGCGGCCGC
Downstream 100 bases:
>100_bases GGTGGGGGCCTGAAATGGGAAACGACAGGACCGCCTTGGCGATCCTGCCGCATCCTACGTTCCTGGCCTCGGCCTTGACG GCGGACCTGGGACACGTTCC
Product: 3-methyladenine DNA glycosylase
Products: NA
Alternate protein names: 3-methyladenine-DNA glycosidase; TAG [H]
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MAEEKQMSWYCDVAPGHPFHGPYHDREYGFPVADEAVLFERLCLEIFQAGLSWLIVLKKRPAMAAAFDGFEVDKVAAYGE AELERLMNDSGIIRNRRKLAAIVENARRLQALRAREGSFAAWLARHHPLTKDGWVKLFKATFVFVGGEVVGEFLMSIGYL PGGHREDCPVQARLRAAGAPCFAVDPAFYA
Sequences:
>Translated_190_residues MAEEKQMSWYCDVAPGHPFHGPYHDREYGFPVADEAVLFERLCLEIFQAGLSWLIVLKKRPAMAAAFDGFEVDKVAAYGE AELERLMNDSGIIRNRRKLAAIVENARRLQALRAREGSFAAWLARHHPLTKDGWVKLFKATFVFVGGEVVGEFLMSIGYL PGGHREDCPVQARLRAAGAPCFAVDPAFYA >Mature_189_residues AEEKQMSWYCDVAPGHPFHGPYHDREYGFPVADEAVLFERLCLEIFQAGLSWLIVLKKRPAMAAAFDGFEVDKVAAYGEA ELERLMNDSGIIRNRRKLAAIVENARRLQALRAREGSFAAWLARHHPLTKDGWVKLFKATFVFVGGEVVGEFLMSIGYLP GGHREDCPVQARLRAAGAPCFAVDPAFYA
Specific function: Hydrolysis of the deoxyribose N-glycosidic bond to excise 3-methyladenine from the damaged DNA polymer formed by alkylation lesions [H]
COG id: COG2818
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789971, Length=169, Percent_Identity=35.5029585798817, Blast_Score=97, Evalue=7e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005019 - InterPro: IPR011257 - InterPro: IPR004597 [H]
Pfam domain/function: PF03352 Adenine_glyco [H]
EC number: =3.2.2.20 [H]
Molecular weight: Translated: 21245; Mature: 21113
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEEKQMSWYCDVAPGHPFHGPYHDREYGFPVADEAVLFERLCLEIFQAGLSWLIVLKKR CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHCCCC PAMAAAFDGFEVDKVAAYGEAELERLMNDSGIIRNRRKLAAIVENARRLQALRAREGSFA CCHHHHCCCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AWLARHHPLTKDGWVKLFKATFVFVGGEVVGEFLMSIGYLPGGHREDCPVQARLRAAGAP HHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC CFAVDPAFYA EEECCCCCCC >Mature Secondary Structure AEEKQMSWYCDVAPGHPFHGPYHDREYGFPVADEAVLFERLCLEIFQAGLSWLIVLKKR CCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEHCCCC PAMAAAFDGFEVDKVAAYGEAELERLMNDSGIIRNRRKLAAIVENARRLQALRAREGSFA CCHHHHCCCCCHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AWLARHHPLTKDGWVKLFKATFVFVGGEVVGEFLMSIGYLPGGHREDCPVQARLRAAGAP HHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCC CFAVDPAFYA EEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]