| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is caiD [C]
Identifier: 83311660
GI number: 83311660
Start: 2743906
End: 2744964
Strand: Reverse
Name: caiD [C]
Synonym: amb2561
Alternate gene names: 83311660
Gene position: 2744964-2743906 (Counterclockwise)
Preceding gene: 83311665
Following gene: 83311659
Centisome position: 55.26
GC content: 65.72
Gene sequence:
>1059_bases ATGGACGGCGAGACTCTCATCTCCAGCGGCGGGCGGCTTGGACGGATCGTTCTGAACCGGCCCAAGGTGCTGAACGCGCT GTCCGCCCGGCAATACCACGACATCACCGCCTGTCTCGTCAGCTGGGAGAGCGATCCTGACGTGGCGGTGATTCTGATCG AGGGCGAGGGCGAGCGGGCGTTCTGCGCCGGCGGCGACATCCGCATGGTGTGGGATGCGGCCCGGCGCGGTGATTCCGAG TTCAGCCACGATGTCTTTCGCACGGAATACCGCCTTAACCGGCGCATCCATGCCTATCCAAAGCCTTACGTGTCGGTGCT TGATGGCATCTGCATGGGGGGAGGGGCCAGATTGTCGGTCAATGGCCGGTTCCGCGTCGCCACCGAGCGTACCCGCTTCG CCATGCCGGAGACGGGCATCGGCTTTTTTCCCGATGTGGGCGCCACCCATTTTCTCAACCGCTGTCCCGGTGATCTGGGA CTCTATCTCGGCCTTACGGGCAAGCAGTTGGGGCCGGCGGACTGCCTGTGGGCGGGCATCGCCACCCATTTCGTCCCGGC CGCCCGGGTGGATGACCTGCGAGCGGGATTGCGCGTCGCGGCGCAATCAGCCGATCCGGAGGATGCGGTGGAGGACGTTC TGGCGCGCTTTCACCAGCCGGTCGCCGACGGGCCGCTGGTCCGGCACATGGAGGCGCTGGAGCGCTGCTTCGCCCCTCGG CGCCTGGACGACATGATCGAAGCTCTGCGCCTGGATGGCGGACAATGGGCTTGGGACACCATCTGGGAATTGTCTGGGCG CGCCCCATTCAGCCTGGCGGTGACTCTGCGGCAACTGCGCGAAGGCCGTGGAATGGGCTTCGATGATGCCATCCGGCGTG AATTCCGCCTCACCTGGCGGTTCCTGCTGGGGCAGGATTTCCTTGAGGGAATCCGTGCCCAGGTCGTAGATAAGGACAGG CGGCCCAACTGGAGTCCCTCCAGCCTGGCCGAGGTGGATGAACTGGCGGTCGCGGCCTGCTTCCAGACACTGGGCGACGA CGAACTGCCGCTGCCGTGA
Upstream 100 bases:
>100_bases GGTCGGCAACGAACGGGTCTTTGGCAATGGAAAAAATTTCACAAAGTTTTTTTGTTCTGTCAATCATAAATCTAGTCAGC AAGTAGAGTAAGGGGCGGGC
Downstream 100 bases:
>100_bases GGAGTGGGTGAGTGCGAGGGAATTGGGGATGAAGCCGGACGTCGATGCGGCCGAGGTGTTGTTCGAGTTCATTCGCCTTG GCAATGCCGTCAAGGTGACG
Product: enoyl-CoA hydratase/carnithine racemase
Products: NA
Alternate protein names: 3-hydroxypropionyl-CoA dehydratase [H]
Number of amino acids: Translated: 352; Mature: 352
Protein sequence:
>352_residues MDGETLISSGGRLGRIVLNRPKVLNALSARQYHDITACLVSWESDPDVAVILIEGEGERAFCAGGDIRMVWDAARRGDSE FSHDVFRTEYRLNRRIHAYPKPYVSVLDGICMGGGARLSVNGRFRVATERTRFAMPETGIGFFPDVGATHFLNRCPGDLG LYLGLTGKQLGPADCLWAGIATHFVPAARVDDLRAGLRVAAQSADPEDAVEDVLARFHQPVADGPLVRHMEALERCFAPR RLDDMIEALRLDGGQWAWDTIWELSGRAPFSLAVTLRQLREGRGMGFDDAIRREFRLTWRFLLGQDFLEGIRAQVVDKDR RPNWSPSSLAEVDELAVAACFQTLGDDELPLP
Sequences:
>Translated_352_residues MDGETLISSGGRLGRIVLNRPKVLNALSARQYHDITACLVSWESDPDVAVILIEGEGERAFCAGGDIRMVWDAARRGDSE FSHDVFRTEYRLNRRIHAYPKPYVSVLDGICMGGGARLSVNGRFRVATERTRFAMPETGIGFFPDVGATHFLNRCPGDLG LYLGLTGKQLGPADCLWAGIATHFVPAARVDDLRAGLRVAAQSADPEDAVEDVLARFHQPVADGPLVRHMEALERCFAPR RLDDMIEALRLDGGQWAWDTIWELSGRAPFSLAVTLRQLREGRGMGFDDAIRREFRLTWRFLLGQDFLEGIRAQVVDKDR RPNWSPSSLAEVDELAVAACFQTLGDDELPLP >Mature_352_residues MDGETLISSGGRLGRIVLNRPKVLNALSARQYHDITACLVSWESDPDVAVILIEGEGERAFCAGGDIRMVWDAARRGDSE FSHDVFRTEYRLNRRIHAYPKPYVSVLDGICMGGGARLSVNGRFRVATERTRFAMPETGIGFFPDVGATHFLNRCPGDLG LYLGLTGKQLGPADCLWAGIATHFVPAARVDDLRAGLRVAAQSADPEDAVEDVLARFHQPVADGPLVRHMEALERCFAPR RLDDMIEALRLDGGQWAWDTIWELSGRAPFSLAVTLRQLREGRGMGFDDAIRREFRLTWRFLLGQDFLEGIRAQVVDKDR RPNWSPSSLAEVDELAVAACFQTLGDDELPLP
Specific function: Plays a role in autotrophic carbon fixation via the 3- hydroxypropionate/4-hydroxybutyrate cycle. Catalyzes the reversible dehydration of 3-hydroxypropionyl-CoA to form acryloyl- CoA, and the reversible dehydration of (S)-3-hydroxybutyryl-CoA to form crot
COG id: COG1024
COG function: function code I; Enoyl-CoA hydratase/carnithine racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI37594471, Length=353, Percent_Identity=41.3597733711048, Blast_Score=274, Evalue=8e-74, Organism=Homo sapiens, GI37594469, Length=300, Percent_Identity=41.6666666666667, Blast_Score=232, Evalue=3e-61, Organism=Homo sapiens, GI194097323, Length=217, Percent_Identity=29.0322580645161, Blast_Score=89, Evalue=5e-18, Organism=Homo sapiens, GI31542718, Length=190, Percent_Identity=24.2105263157895, Blast_Score=75, Evalue=7e-14, Organism=Escherichia coli, GI221142681, Length=192, Percent_Identity=29.6875, Blast_Score=77, Evalue=2e-15, Organism=Escherichia coli, GI1787659, Length=186, Percent_Identity=26.8817204301075, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788597, Length=145, Percent_Identity=26.8965517241379, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788682, Length=213, Percent_Identity=27.6995305164319, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI25144157, Length=350, Percent_Identity=40.8571428571429, Blast_Score=271, Evalue=4e-73, Organism=Caenorhabditis elegans, GI25144160, Length=350, Percent_Identity=40.8571428571429, Blast_Score=271, Evalue=4e-73, Organism=Caenorhabditis elegans, GI17554946, Length=192, Percent_Identity=31.7708333333333, Blast_Score=87, Evalue=1e-17, Organism=Caenorhabditis elegans, GI25145438, Length=227, Percent_Identity=27.3127753303965, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17534483, Length=196, Percent_Identity=30.6122448979592, Blast_Score=74, Evalue=8e-14, Organism=Caenorhabditis elegans, GI25144276, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17508951, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17508953, Length=205, Percent_Identity=26.8292682926829, Blast_Score=65, Evalue=5e-11, Organism=Saccharomyces cerevisiae, GI6320241, Length=339, Percent_Identity=34.2182890855457, Blast_Score=174, Evalue=2e-44, Organism=Drosophila melanogaster, GI28571729, Length=345, Percent_Identity=40.8695652173913, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI28571730, Length=345, Percent_Identity=40.8695652173913, Blast_Score=266, Evalue=2e-71, Organism=Drosophila melanogaster, GI20129971, Length=202, Percent_Identity=29.2079207920792, Blast_Score=85, Evalue=8e-17, Organism=Drosophila melanogaster, GI24653477, Length=202, Percent_Identity=29.2079207920792, Blast_Score=85, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014748 - InterPro: IPR001753 - InterPro: IPR018376 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.116 [H]
Molecular weight: Translated: 39078; Mature: 39078
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGETLISSGGRLGRIVLNRPKVLNALSARQYHDITACLVSWESDPDVAVILIEGEGERA CCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCEE FCAGGDIRMVWDAARRGDSEFSHDVFRTEYRLNRRIHAYPKPYVSVLDGICMGGGARLSV EECCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHCCCCCEEEE NGRFRVATERTRFAMPETGIGFFPDVGATHFLNRCPGDLGLYLGLTGKQLGPADCLWAGI CCEEEEEECCHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHH ATHFVPAARVDDLRAGLRVAAQSADPEDAVEDVLARFHQPVADGPLVRHMEALERCFAPR HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC RLDDMIEALRLDGGQWAWDTIWELSGRAPFSLAVTLRQLREGRGMGFDDAIRREFRLTWR HHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FLLGQDFLEGIRAQVVDKDRRPNWSPSSLAEVDELAVAACFQTLGDDELPLP HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDGETLISSGGRLGRIVLNRPKVLNALSARQYHDITACLVSWESDPDVAVILIEGEGERA CCCCHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHEEECCCCCCEEEEEEECCCCEE FCAGGDIRMVWDAARRGDSEFSHDVFRTEYRLNRRIHAYPKPYVSVLDGICMGGGARLSV EECCCCEEEEEHHHHCCCCHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHCCCCCEEEE NGRFRVATERTRFAMPETGIGFFPDVGATHFLNRCPGDLGLYLGLTGKQLGPADCLWAGI CCEEEEEECCHHCCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHH ATHFVPAARVDDLRAGLRVAAQSADPEDAVEDVLARFHQPVADGPLVRHMEALERCFAPR HHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC RLDDMIEALRLDGGQWAWDTIWELSGRAPFSLAVTLRQLREGRGMGFDDAIRREFRLTWR HHHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH FLLGQDFLEGIRAQVVDKDRRPNWSPSSLAEVDELAVAACFQTLGDDELPLP HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA