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The map label for this gene is scpA [H]

Identifier: 83311625

GI number: 83311625

Start: 2706793

End: 2707608

Strand: Reverse

Name: scpA [H]

Synonym: amb2526

Alternate gene names: 83311625

Gene position: 2707608-2706793 (Counterclockwise)

Preceding gene: 83311626

Following gene: 83311624

Centisome position: 54.51

GC content: 64.95

Gene sequence:

>816_bases
GTGAGTGGGGCTCTGCCCTTTGCCTTCGAGGAGGAATCCCGGCCGGGCCGCGCCCCGGCCGAGCGTTTGTTGCTCGATCT
GGACGGCTGGGAAGGCCCGCTGGACGTTCTGCTGCAACTGGCCCGCGACCAGAAGGTGGATCTGGCCAAGATCTCGATTC
TGAAGCTCGCCGACCAATATCTTGAATTTGTTCAGAAGGTTGGGCGGGATCAGATCGATCTCGCCGCCGAATACCTGGTG
ATGGCGGCATGGCTGGCCTATCTCAAGAGCCGCCTGCTGCTGCCCGAACCGGAACCCGAGCCGGGCGAGGAATTGTCCCC
GGCCGAGATGGCCGCCGCCCTGGCGTTCCGGCTGCAACGGCTGGAGGCCATGCAGAAATCCGGCGCGGCCCTGTTCGGCC
GGCGTCTGCTCAATCGTGATGTCTTCGCCCGGGGGGCGCCCGAGGATATCGAGGTGGTCAACCGCTCCATCTTCGATCTC
GATCTCTATGATCTGCTGAAGGCCTATGCCGACCATGTGGTGCGCAACTCGGTGCGCACCCTGACGGTGGAAGCCCCCGA
CCTGTGGTCGGTGGAGAACGCCCTGGCGCGGTTGGAGAGCATGCTGGGCATCGGCGCTCTACCCGACTGGTCGGTGCTGA
TGGCCTACCTGCCCGCCATCGAGGGGGACACCTTGAAGATGAAATCCGCCATGGCTTCGACCTTCGTCGCCGCGCTGGAA
CTGGCCAAGCAGGGCAAGCTGGTGCTGCGCCAGGACGGCGCCGCCTATTCGCCCATCTATATCCGGGCCGGGCAGGGCGA
GGGGAGGGAGGATTGA

Upstream 100 bases:

>100_bases
TGCTGGGGTCTCGGATCGGCGTCGACCTGGACGTGTTCCGCTGGCTGGTCCAGGGGCCGGTGGATACCATCGGCAACGCG
CTGGTCAGGGCATTGGGTCC

Downstream 100 bases:

>100_bases
GGTTTATTGGGCTTGGGCGGCAGCCCAATATTTCCATATGGGGGCTAGGGATTGACCATTGATCCGCAATACCTGCGCAT
CATCGAAGCGCTGATCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MSGALPFAFEEESRPGRAPAERLLLDLDGWEGPLDVLLQLARDQKVDLAKISILKLADQYLEFVQKVGRDQIDLAAEYLV
MAAWLAYLKSRLLLPEPEPEPGEELSPAEMAAALAFRLQRLEAMQKSGAALFGRRLLNRDVFARGAPEDIEVVNRSIFDL
DLYDLLKAYADHVVRNSVRTLTVEAPDLWSVENALARLESMLGIGALPDWSVLMAYLPAIEGDTLKMKSAMASTFVAALE
LAKQGKLVLRQDGAAYSPIYIRAGQGEGRED

Sequences:

>Translated_271_residues
MSGALPFAFEEESRPGRAPAERLLLDLDGWEGPLDVLLQLARDQKVDLAKISILKLADQYLEFVQKVGRDQIDLAAEYLV
MAAWLAYLKSRLLLPEPEPEPGEELSPAEMAAALAFRLQRLEAMQKSGAALFGRRLLNRDVFARGAPEDIEVVNRSIFDL
DLYDLLKAYADHVVRNSVRTLTVEAPDLWSVENALARLESMLGIGALPDWSVLMAYLPAIEGDTLKMKSAMASTFVAALE
LAKQGKLVLRQDGAAYSPIYIRAGQGEGRED
>Mature_270_residues
SGALPFAFEEESRPGRAPAERLLLDLDGWEGPLDVLLQLARDQKVDLAKISILKLADQYLEFVQKVGRDQIDLAAEYLVM
AAWLAYLKSRLLLPEPEPEPGEELSPAEMAAALAFRLQRLEAMQKSGAALFGRRLLNRDVFARGAPEDIEVVNRSIFDLD
LYDLLKAYADHVVRNSVRTLTVEAPDLWSVENALARLESMLGIGALPDWSVLMAYLPAIEGDTLKMKSAMASTFVAALEL
AKQGKLVLRQDGAAYSPIYIRAGQGEGRED

Specific function: Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing smc and scpB that pull DNA away from mid-cell into both cell halves [H]

COG id: COG1354

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm. Note=Associated with two foci at the outer edges of the nucleoid region in young cells, and at four foci within both cell halves in older cells (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003768 [H]

Pfam domain/function: PF02616 ScpA_ScpB [H]

EC number: NA

Molecular weight: Translated: 29942; Mature: 29811

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGALPFAFEEESRPGRAPAERLLLDLDGWEGPLDVLLQLARDQKVDLAKISILKLADQY
CCCCCCCCCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LEFVQKVGRDQIDLAAEYLVMAAWLAYLKSRLLLPEPEPEPGEELSPAEMAAALAFRLQR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LEAMQKSGAALFGRRLLNRDVFARGAPEDIEVVNRSIFDLDLYDLLKAYADHVVRNSVRT
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHE
LTVEAPDLWSVENALARLESMLGIGALPDWSVLMAYLPAIEGDTLKMKSAMASTFVAALE
EEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LAKQGKLVLRQDGAAYSPIYIRAGQGEGRED
HHHCCCEEEEECCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SGALPFAFEEESRPGRAPAERLLLDLDGWEGPLDVLLQLARDQKVDLAKISILKLADQY
CCCCCCCCCCCCCCCCCCHHHHEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LEFVQKVGRDQIDLAAEYLVMAAWLAYLKSRLLLPEPEPEPGEELSPAEMAAALAFRLQR
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LEAMQKSGAALFGRRLLNRDVFARGAPEDIEVVNRSIFDLDLYDLLKAYADHVVRNSVRT
HHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHE
LTVEAPDLWSVENALARLESMLGIGALPDWSVLMAYLPAIEGDTLKMKSAMASTFVAALE
EEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LAKQGKLVLRQDGAAYSPIYIRAGQGEGRED
HHHCCCEEEEECCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]