| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is tatB [H]
Identifier: 83311622
GI number: 83311622
Start: 2704999
End: 2705346
Strand: Reverse
Name: tatB [H]
Synonym: amb2523
Alternate gene names: 83311622
Gene position: 2705346-2704999 (Counterclockwise)
Preceding gene: 83311623
Following gene: 83311621
Centisome position: 54.46
GC content: 67.24
Gene sequence:
>348_bases ATGGCGCTGATCGCCGTGGTCAGCCTGATCGTTATCGGACCCAAGGATCTGCCGGTGGTGCTGCGCCAGATGGGCCGCTG GACCCGCAAGGCGCGCGAGATGGCCTCGGAGTTCCATCGCGGCATCGACGACATGGTGCGGGAATCCGAGCTGGACGAGT TGAAGAAGCAGGTGACCAAGGCGACCGACGTCAACCTGCTGCGCCAGGAGGTCGACAAGGCCATCGACCCCACCGGGGAG ATGGCCAAGGCCATGGAGCTTCCCGCCCTCGACATGGCGGCGACCCCCGAACCGGTGCCGCAAGAGATCAAGCCCGACGA GGCGCCGAGCCGCCCGCCGGAACCCTAG
Upstream 100 bases:
>100_bases CGCGCCCCAGGTCACGGAGGCCCAGGCCGCCAAGCCGGCCGCCGCGCCCGACACCGCTCCCAAGGTCTAGGGCCGGATGT TCGACATCGGCTGGGACGAG
Downstream 100 bases:
>100_bases AGGACGTATTTTGAGCGATTCCCACGACGACAAGACCATGCCGCTGCTCGAGCATCTGATCGAGTTGCGGCGGCGGCTGA TCTGGTCGGCGATCGCCTTC
Product: Sec-independent protein secretion pathway components
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MALIAVVSLIVIGPKDLPVVLRQMGRWTRKAREMASEFHRGIDDMVRESELDELKKQVTKATDVNLLRQEVDKAIDPTGE MAKAMELPALDMAATPEPVPQEIKPDEAPSRPPEP
Sequences:
>Translated_115_residues MALIAVVSLIVIGPKDLPVVLRQMGRWTRKAREMASEFHRGIDDMVRESELDELKKQVTKATDVNLLRQEVDKAIDPTGE MAKAMELPALDMAATPEPVPQEIKPDEAPSRPPEP >Mature_114_residues ALIAVVSLIVIGPKDLPVVLRQMGRWTRKAREMASEFHRGIDDMVRESELDELKKQVTKATDVNLLRQEVDKAIDPTGEM AKAMELPALDMAATPEPVPQEIKPDEAPSRPPEP
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 12796; Mature: 12665
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIAVVSLIVIGPKDLPVVLRQMGRWTRKAREMASEFHRGIDDMVRESELDELKKQVTK CHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATDVNLLRQEVDKAIDPTGEMAKAMELPALDMAATPEPVPQEIKPDEAPSRPPEP HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ALIAVVSLIVIGPKDLPVVLRQMGRWTRKAREMASEFHRGIDDMVRESELDELKKQVTK HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATDVNLLRQEVDKAIDPTGEMAKAMELPALDMAATPEPVPQEIKPDEAPSRPPEP HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA