Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83311567

Identifier: 83311567

GI number: 83311567

Start: 2648026

End: 2648820

Strand: Reverse

Name: 83311567

Synonym: amb2468

Alternate gene names: NA

Gene position: 2648820-2648026 (Counterclockwise)

Preceding gene: 83311570

Following gene: 83311565

Centisome position: 53.33

GC content: 65.79

Gene sequence:

>795_bases
ATGGCTGGCATGGGTATGGTCCGCGCGTCATTGGGGAGTAGCCGCCTTCGGGTATCAGAAGGGGGCGCGTCAACAGACTT
GGGCCTTTGGCCCATGGCGCGTCCGGCAGATCAGCCTGGCGAGACCTTTGGCTTCGGATTCCTTGCGTCCACGGGATTGG
GCGGGTTTCCGGGCCATCGGTCATGCGTTGCCCAATCCCCCATTTGGTGCCTTATGGAATCGCTGCTGGTTTCCCTTGCC
GTGGTCACTGCCGCCGAGATCGGCGACAAGACCCAGCTTCTCGCCCTGCTGCTCGCCGCCAAGTTCAGGAAGCCCTGGGC
GGTGGTCGCCGGTATCCTGGTGGCCACCGTGGCCAATCACGGCCTTGCGGCCCTGCTGGGCGTCGAGGCCGCCCGCTGGA
TCGGCCCAGAAACCATGCGCTGGATCGTCGGCCTTTCCTTCATCGCCATGGCGGCATGGACCCTGGTCCCCGACAAGATG
GACGAGGACGAGCAGCCCAGGATGTGGGAGAAGGCCGGTCCCTTCGTCGCCACCACCGTGGCGTTCTTCCTGGTGGAGAT
CGGCGACAAGACCCAGATCGCCACCGTCGCCCTGGGGGCGCGCTTTGGCGACCTGCTGTTCGTCACCATGGGCACCACGC
TGGGCATGCTGATCGCCGACGTGCCCGCCGTGTTCGTGGGCAACGCCATGGCCGAGAAGCTGCCGCTCAAGCTGGTGCGT
ATGGTCGCCGCCGCCCTGTTCGCCATCCTGGGCGTCCTGGCGCTAACCGATGTGGGCAAGGCGGTGATGGGTTAA

Upstream 100 bases:

>100_bases
AGATTGCGTCTCCATGGACCCCCGCCTGCGCGGGGGTGACGGAACAAATGAAGGGCGGATGTTAGAGAGATTCTCTGGCG
GGATAAAGGGCTTGCCCGGC

Downstream 100 bases:

>100_bases
GGGGTGAAACGATGATTTGAACCACGAAGGCACGAAGGAAAGGGGAAGGATATCTTCTTCGTGTTCCTTCGTGCCTTCGC
TCCTTCGTGGTTCACCCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MAGMGMVRASLGSSRLRVSEGGASTDLGLWPMARPADQPGETFGFGFLASTGLGGFPGHRSCVAQSPIWCLMESLLVSLA
VVTAAEIGDKTQLLALLLAAKFRKPWAVVAGILVATVANHGLAALLGVEAARWIGPETMRWIVGLSFIAMAAWTLVPDKM
DEDEQPRMWEKAGPFVATTVAFFLVEIGDKTQIATVALGARFGDLLFVTMGTTLGMLIADVPAVFVGNAMAEKLPLKLVR
MVAAALFAILGVLALTDVGKAVMG

Sequences:

>Translated_264_residues
MAGMGMVRASLGSSRLRVSEGGASTDLGLWPMARPADQPGETFGFGFLASTGLGGFPGHRSCVAQSPIWCLMESLLVSLA
VVTAAEIGDKTQLLALLLAAKFRKPWAVVAGILVATVANHGLAALLGVEAARWIGPETMRWIVGLSFIAMAAWTLVPDKM
DEDEQPRMWEKAGPFVATTVAFFLVEIGDKTQIATVALGARFGDLLFVTMGTTLGMLIADVPAVFVGNAMAEKLPLKLVR
MVAAALFAILGVLALTDVGKAVMG
>Mature_263_residues
AGMGMVRASLGSSRLRVSEGGASTDLGLWPMARPADQPGETFGFGFLASTGLGGFPGHRSCVAQSPIWCLMESLLVSLAV
VTAAEIGDKTQLLALLLAAKFRKPWAVVAGILVATVANHGLAALLGVEAARWIGPETMRWIVGLSFIAMAAWTLVPDKMD
EDEQPRMWEKAGPFVATTVAFFLVEIGDKTQIATVALGARFGDLLFVTMGTTLGMLIADVPAVFVGNAMAEKLPLKLVRM
VAAALFAILGVLALTDVGKAVMG

Specific function: Unknown

COG id: COG2119

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27659; Mature: 27528

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGMGMVRASLGSSRLRVSEGGASTDLGLWPMARPADQPGETFGFGFLASTGLGGFPGHR
CCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
SCVAQSPIWCLMESLLVSLAVVTAAEIGDKTQLLALLLAAKFRKPWAVVAGILVATVANH
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
GLAALLGVEAARWIGPETMRWIVGLSFIAMAAWTLVPDKMDEDEQPRMWEKAGPFVATTV
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHH
AFFLVEIGDKTQIATVALGARFGDLLFVTMGTTLGMLIADVPAVFVGNAMAEKLPLKLVR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVAAALFAILGVLALTDVGKAVMG
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGMGMVRASLGSSRLRVSEGGASTDLGLWPMARPADQPGETFGFGFLASTGLGGFPGHR
CCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCC
SCVAQSPIWCLMESLLVSLAVVTAAEIGDKTQLLALLLAAKFRKPWAVVAGILVATVANH
HHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
GLAALLGVEAARWIGPETMRWIVGLSFIAMAAWTLVPDKMDEDEQPRMWEKAGPFVATTV
CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHCCCHHHHHH
AFFLVEIGDKTQIATVALGARFGDLLFVTMGTTLGMLIADVPAVFVGNAMAEKLPLKLVR
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVAAALFAILGVLALTDVGKAVMG
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA