| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311518
Identifier: 83311518
GI number: 83311518
Start: 2609787
End: 2610230
Strand: Reverse
Name: 83311518
Synonym: amb2419
Alternate gene names: NA
Gene position: 2610230-2609787 (Counterclockwise)
Preceding gene: 83311521
Following gene: 83311517
Centisome position: 52.55
GC content: 54.5
Gene sequence:
>444_bases ATGAAAAAGTTCATTTACGACATCCCACGCGAGACTTTGCCTATCCTTGAGAAGTTCTTAGACAGAATGCTCTCTGAGGT GCGCGAACGTGCCAAAAGAGAGACTATGCTTGAAGTATGTAGCAAGAATGCAACTGTCAAATTCCGCACCCTGCAAAACA TCGCCAAAGCCGCACTGGACAAGGTTTCCGGCGACATCAACAACCCTGCAGGTGTGGCGGAAATGCAACGGCAGTTTCCA GGGCTCGGAGACGAGCAAGCCCTTGCTCACCTTCGATTTGCCATGAAACATCGCGAGAAGGAAGCCCGCAAGCAACGACT GGAAGCTGTGGCGGAGATGGTTTGGCAGGGCTACCGCAACGACCGCATAGCCTATCGCCTGGGGGTATCACTCCGCACCG CCGCCCAGCTTGCTTCAGCCGTCAAGAGGAGAGCCCACCCATGA
Upstream 100 bases:
>100_bases CGACGAAAAACACTTGCTACCGGCTTGAACTTCCATAATTTCCAGCCCGGCCAAAGGCCACAGGACAACGCCCCAGAATG GGCATTCGACCGAGGGCACC
Downstream 100 bases:
>100_bases AAACGAGAATGGCCATTCAGATTTTTGCCCTGCTGACCCTGCCCGCCGTAGCTCAGGCATCAGCCCTTTGCGATAGCGCC GCAAACATCGTCGGATGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 147
Protein sequence:
>147_residues MKKFIYDIPRETLPILEKFLDRMLSEVRERAKRETMLEVCSKNATVKFRTLQNIAKAALDKVSGDINNPAGVAEMQRQFP GLGDEQALAHLRFAMKHREKEARKQRLEAVAEMVWQGYRNDRIAYRLGVSLRTAAQLASAVKRRAHP
Sequences:
>Translated_147_residues MKKFIYDIPRETLPILEKFLDRMLSEVRERAKRETMLEVCSKNATVKFRTLQNIAKAALDKVSGDINNPAGVAEMQRQFP GLGDEQALAHLRFAMKHREKEARKQRLEAVAEMVWQGYRNDRIAYRLGVSLRTAAQLASAVKRRAHP >Mature_147_residues MKKFIYDIPRETLPILEKFLDRMLSEVRERAKRETMLEVCSKNATVKFRTLQNIAKAALDKVSGDINNPAGVAEMQRQFP GLGDEQALAHLRFAMKHREKEARKQRLEAVAEMVWQGYRNDRIAYRLGVSLRTAAQLASAVKRRAHP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16907; Mature: 16907
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFIYDIPRETLPILEKFLDRMLSEVRERAKRETMLEVCSKNATVKFRTLQNIAKAALD CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KVSGDINNPAGVAEMQRQFPGLGDEQALAHLRFAMKHREKEARKQRLEAVAEMVWQGYRN HHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DRIAYRLGVSLRTAAQLASAVKRRAHP CCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKKFIYDIPRETLPILEKFLDRMLSEVRERAKRETMLEVCSKNATVKFRTLQNIAKAALD CCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH KVSGDINNPAGVAEMQRQFPGLGDEQALAHLRFAMKHREKEARKQRLEAVAEMVWQGYRN HHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DRIAYRLGVSLRTAAQLASAVKRRAHP CCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA