| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
Click here to switch to the map view.
The map label for this gene is 83311350
Identifier: 83311350
GI number: 83311350
Start: 2455768
End: 2456331
Strand: Reverse
Name: 83311350
Synonym: amb2251
Alternate gene names: NA
Gene position: 2456331-2455768 (Counterclockwise)
Preceding gene: 83311354
Following gene: 83311349
Centisome position: 49.45
GC content: 62.23
Gene sequence:
>564_bases ATGCAATTCTATTCCGCCGAACGCCTCGGCCTGTTCATCGACGGGTCCAACCTTTATTCGGCCGCCCGTGCCCTGGGCTT CGACATCGACTACAAGAAGCTGCTGAACCTGTTCGCCGGCAAGGGGCGCCTGATCCGCGCCTTCTACTACACCGCCCTGA TGGAGGATCAGGAATACTCCCCCATCCGCCCGCTGGTGGACTGGCTGGACTACAACGGCTACACCATGGTCACCAAGCCG ACCAAGGAATTCACCGATGCCATGGGCCGGCGCAAGATCAAAGGCAACATGGATATCGAACTGGCCATCGACGTGATGGA GATGTGCCAGTATCTCGACCATGTGGTGCTGTTCTCCGGCGACGGCGATTTCCGCCGCCTGGTGGAAGCGGTGCAAAGAA AGGGCGTGCGCGTCTCGGTGGTCAGCACCATCCGCTCGCAGCCGCCCATGGTGGCCGACGAGTTGCGGCGTCAGGCCGAT GTGTTCATCGAACTGCAGGACCTGGAGAGCCAGATCGCCCGCGCCCAGCAGCACCGCGACGACCGCCCCTACCCCGCCGA TTGA
Upstream 100 bases:
>100_bases CATGCCAAAGGCCCCTTGCAGGACAGCCCCTCCCCCCCTACGTTGAAGGCATTATTCGCCGCCCCAGGCGGCTAAGGCCT TTCAGACAAGTGAGATCGTC
Downstream 100 bases:
>100_bases GATGAGCTTTTCCGCGCCCGGGGCCGATTGCGGGCTGTGCCCGCGTCTGGCCGAGTTCCGCCGCGCCAACCGGGTCCAAT TTCCCGGCTGGCATCACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MQFYSAERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMEDQEYSPIRPLVDWLDYNGYTMVTKP TKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSGDGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQAD VFIELQDLESQIARAQQHRDDRPYPAD
Sequences:
>Translated_187_residues MQFYSAERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMEDQEYSPIRPLVDWLDYNGYTMVTKP TKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSGDGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQAD VFIELQDLESQIARAQQHRDDRPYPAD >Mature_187_residues MQFYSAERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMEDQEYSPIRPLVDWLDYNGYTMVTKP TKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSGDGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQAD VFIELQDLESQIARAQQHRDDRPYPAD
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21590; Mature: 21590
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQFYSAERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMEDQEYS CCCCCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG CHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEECC DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQQHRD CCHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCC DRPYPAD CCCCCCC >Mature Secondary Structure MQFYSAERLGLFIDGSNLYSAARALGFDIDYKKLLNLFAGKGRLIRAFYYTALMEDQEYS CCCCCCCCCEEEEECCHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC PIRPLVDWLDYNGYTMVTKPTKEFTDAMGRRKIKGNMDIELAIDVMEMCQYLDHVVLFSG CHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCEEEEECC DGDFRRLVEAVQRKGVRVSVVSTIRSQPPMVADELRRQADVFIELQDLESQIARAQQHRD CCHHHHHHHHHHHCCCEEEEHHHHHCCCCHHHHHHHHHHHHEEEHHHHHHHHHHHHHHCC DRPYPAD CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA