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The map label for this gene is yohD [H]

Identifier: 83311299

GI number: 83311299

Start: 2396438

End: 2396956

Strand: Reverse

Name: yohD [H]

Synonym: amb2200

Alternate gene names: 83311299

Gene position: 2396956-2396438 (Counterclockwise)

Preceding gene: 83311300

Following gene: 83311297

Centisome position: 48.26

GC content: 64.35

Gene sequence:

>519_bases
GTGGTCATCGTCACCGGCGTCCTGGCCTCGGAGGGCCGCTTCCGCATTCACGTGGAATTGCTGGCCCTGGCGGCGCTGAC
CGGAAGCTTCTTCGGGGATCAGCTCTACTACTACATCGGCCGGAAGTACGGGGCTCCGCTGCTCAAGCGCTGGCCCAGCC
TGTCGGGACGCATCGACTGGGCCTTCGAGACGGTCAATCGCAGCCCGGCGATCTTCATCCTGTCGTTCCGCTGGATTTAT
GGCGTGCGCAACGTGGCGCCCTTCATTGTCGGCATCGCCGGCGTGCCCAGGGTCAAGTACCTGATCCTGAATTTCATCGC
CGCGGCCATCTGGGCCCACTCCTTCGCCTGGGGCGGCTTCTTCATGGGGCGCAAGCTCGAGGAATGGCTGGGCGAGAGCA
AGTGGTTCGTCCTCGGCGGCTTCATTCTCTTCATGATCGGCTTCGGCGTGTTCGGCGCCATGCGCGGCCGGGCCAAAAGC
GTGCCCAAACCTGTCGAGCCCGCCGAACCGGTTCAGTGA

Upstream 100 bases:

>100_bases
TGGGATTGCCTTGGAAGAGCTGGTCGTCCACGTCCTGACGCAATACGGGTACCTGCTCTATCCGCTTATTACCGCCTGGA
CTTTCATCGAGGGCGAAACG

Downstream 100 bases:

>100_bases
CGCGTGGCGGTGTTGAGCGAGTTCCGCGCTTCCTGGAATCTGACCCGACGCATCTGATACTCGGCGACCCGGGCCTGACG
ATAGGCCTCGGCGATGCGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MVIVTGVLASEGRFRIHVELLALAALTGSFFGDQLYYYIGRKYGAPLLKRWPSLSGRIDWAFETVNRSPAIFILSFRWIY
GVRNVAPFIVGIAGVPRVKYLILNFIAAAIWAHSFAWGGFFMGRKLEEWLGESKWFVLGGFILFMIGFGVFGAMRGRAKS
VPKPVEPAEPVQ

Sequences:

>Translated_172_residues
MVIVTGVLASEGRFRIHVELLALAALTGSFFGDQLYYYIGRKYGAPLLKRWPSLSGRIDWAFETVNRSPAIFILSFRWIY
GVRNVAPFIVGIAGVPRVKYLILNFIAAAIWAHSFAWGGFFMGRKLEEWLGESKWFVLGGFILFMIGFGVFGAMRGRAKS
VPKPVEPAEPVQ
>Mature_172_residues
MVIVTGVLASEGRFRIHVELLALAALTGSFFGDQLYYYIGRKYGAPLLKRWPSLSGRIDWAFETVNRSPAIFILSFRWIY
GVRNVAPFIVGIAGVPRVKYLILNFIAAAIWAHSFAWGGFFMGRKLEEWLGESKWFVLGGFILFMIGFGVFGAMRGRAKS
VPKPVEPAEPVQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI87082056, Length=130, Percent_Identity=30.7692307692308, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 19280; Mature: 19280

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIVTGVLASEGRFRIHVELLALAALTGSFFGDQLYYYIGRKYGAPLLKRWPSLSGRIDW
CEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEE
AFETVNRSPAIFILSFRWIYGVRNVAPFIVGIAGVPRVKYLILNFIAAAIWAHSFAWGGF
EEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FMGRKLEEWLGESKWFVLGGFILFMIGFGVFGAMRGRAKSVPKPVEPAEPVQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MVIVTGVLASEGRFRIHVELLALAALTGSFFGDQLYYYIGRKYGAPLLKRWPSLSGRIDW
CEEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCEEE
AFETVNRSPAIFILSFRWIYGVRNVAPFIVGIAGVPRVKYLILNFIAAAIWAHSFAWGGF
EEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
FMGRKLEEWLGESKWFVLGGFILFMIGFGVFGAMRGRAKSVPKPVEPAEPVQ
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]