| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ctaE [H]
Identifier: 83311266
GI number: 83311266
Start: 2351293
End: 2352111
Strand: Reverse
Name: ctaE [H]
Synonym: amb2167
Alternate gene names: 83311266
Gene position: 2352111-2351293 (Counterclockwise)
Preceding gene: 83311267
Following gene: 83311261
Centisome position: 47.35
GC content: 65.08
Gene sequence:
>819_bases ATGAGCCACGCCCAAGCCACCCCCCGCGCTCCCGGCAATGCCCCCCATCCCTTCCATCTGGTCGATCCCAGTCCCTGGCC CCTGGTGGGGTCCATCTCGGCGCTGGTCCTGGTCTACGGCGCCGTGAGCTGGTTCCGCGACCACGCCCATACCAGCGTGA TGCTGGCGGGCCTTGGGCTGGTGGCCATCACCATGTTCGGCTGGTGGCGCGACATCTTCCGCGAGGCCCGCGCCGGCCAT GCCCATACCGAAGCGGTCTGCCATGGCCTCAGGATGGGCATGAGCCTGTTCATCGCCTCGGAAGTGATGTTCTTCGTCGC CTTCTTCTGGGCCTACTTCCATTCCGCCCTGGGGATAGCGCCCATGGTGAGCCAGTGGCCGCCTTCCGGCATCCAGACCC TGGACACCTGGCACATTCCCTTCATCAACACCCTGATCCTGATGAGTTCGGGCGTGACGCTGACCAAGTCTCACCACGCG CTGCGCCACGGCCATCGCGGCGCCACCAAGGCGTGGCTGGCAGTGACCATCGCTCTGGGCGTGCTGTTCCTGTCCCTGCA GATCCATGAATACGGCCAGGCCCTGTTCGCGTTCACCGACGGCATCTATCCGTCGGTGTTCTACATGGCCACCGGGTTCC ATGGCTTCCACGTCTTCGTGGGCGTGTGCTTCCTCACCGTCTGCCTCAACCGGGTGCGGGTGGGCGATTTCACGCCGGCC AAGCATGTGGGCTTCGAGGCGGCGGCGTGGTACTGGCACTTCGTCGACGTGGTCTGGGTCTTCCTGTTCGTCTGGGTCTA CTGGTGGGGCAACGGCTGA
Upstream 100 bases:
>100_bases ATCCGGCCATGGCCGCCGATCCCTTGAGCAACGAGGTCGGGACCATCACCCTGTCCTACACCTTCTTCAATGCCAACCCT GCGGACGAAAGAGGACGGTC
Downstream 100 bases:
>100_bases TCAGGAGGTCGGCCACACGAAGGACTGAGCGGCGCAGGGCCTTGCCAGCAAGAAGCCCTGCACCTCTTCGCAACCGAGGT CGGCGACCAGACGCATCTGC
Product: Heme/copper-type cytochrome/quinol oxidase
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III [H]
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSHAQATPRAPGNAPHPFHLVDPSPWPLVGSISALVLVYGAVSWFRDHAHTSVMLAGLGLVAITMFGWWRDIFREARAGH AHTEAVCHGLRMGMSLFIASEVMFFVAFFWAYFHSALGIAPMVSQWPPSGIQTLDTWHIPFINTLILMSSGVTLTKSHHA LRHGHRGATKAWLAVTIALGVLFLSLQIHEYGQALFAFTDGIYPSVFYMATGFHGFHVFVGVCFLTVCLNRVRVGDFTPA KHVGFEAAAWYWHFVDVVWVFLFVWVYWWGNG
Sequences:
>Translated_272_residues MSHAQATPRAPGNAPHPFHLVDPSPWPLVGSISALVLVYGAVSWFRDHAHTSVMLAGLGLVAITMFGWWRDIFREARAGH AHTEAVCHGLRMGMSLFIASEVMFFVAFFWAYFHSALGIAPMVSQWPPSGIQTLDTWHIPFINTLILMSSGVTLTKSHHA LRHGHRGATKAWLAVTIALGVLFLSLQIHEYGQALFAFTDGIYPSVFYMATGFHGFHVFVGVCFLTVCLNRVRVGDFTPA KHVGFEAAAWYWHFVDVVWVFLFVWVYWWGNG >Mature_271_residues SHAQATPRAPGNAPHPFHLVDPSPWPLVGSISALVLVYGAVSWFRDHAHTSVMLAGLGLVAITMFGWWRDIFREARAGHA HTEAVCHGLRMGMSLFIASEVMFFVAFFWAYFHSALGIAPMVSQWPPSGIQTLDTWHIPFINTLILMSSGVTLTKSHHAL RHGHRGATKAWLAVTIALGVLFLSLQIHEYGQALFAFTDGIYPSVFYMATGFHGFHVFVGVCFLTVCLNRVRVGDFTPAK HVGFEAAAWYWHFVDVVWVFLFVWVYWWGNG
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
Organism=Homo sapiens, GI251831113, Length=257, Percent_Identity=49.0272373540856, Blast_Score=227, Evalue=1e-59, Organism=Escherichia coli, GI1786633, Length=183, Percent_Identity=25.6830601092896, Blast_Score=62, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6226542, Length=259, Percent_Identity=40.9266409266409, Blast_Score=182, Evalue=7e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 30414; Mature: 30282
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHAQATPRAPGNAPHPFHLVDPSPWPLVGSISALVLVYGAVSWFRDHAHTSVMLAGLGL CCCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAITMFGWWRDIFREARAGHAHTEAVCHGLRMGMSLFIASEVMFFVAFFWAYFHSALGIA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH PMVSQWPPSGIQTLDTWHIPFINTLILMSSGVTLTKSHHALRHGHRGATKAWLAVTIALG HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHH VLFLSLQIHEYGQALFAFTDGIYPSVFYMATGFHGFHVFVGVCFLTVCLNRVRVGDFTPA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH KHVGFEAAAWYWHFVDVVWVFLFVWVYWWGNG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SHAQATPRAPGNAPHPFHLVDPSPWPLVGSISALVLVYGAVSWFRDHAHTSVMLAGLGL CCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VAITMFGWWRDIFREARAGHAHTEAVCHGLRMGMSLFIASEVMFFVAFFWAYFHSALGIA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH PMVSQWPPSGIQTLDTWHIPFINTLILMSSGVTLTKSHHALRHGHRGATKAWLAVTIALG HHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEHHHHHHHHCCCCHHHHHHHHHHHHH VLFLSLQIHEYGQALFAFTDGIYPSVFYMATGFHGFHVFVGVCFLTVCLNRVRVGDFTPA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCH KHVGFEAAAWYWHFVDVVWVFLFVWVYWWGNG HHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA