Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 83311203

GI number: 83311203

Start: 2276817

End: 2278985

Strand: Reverse

Name: trg [C]

Synonym: amb2104

Alternate gene names: 83311203

Gene position: 2278985-2276817 (Counterclockwise)

Preceding gene: 83311209

Following gene: 83311202

Centisome position: 45.88

GC content: 71.42

Gene sequence:

>2169_bases
TTGATGATTGCGGCACTGACGTCCAACTTGAAGATCGGCCGGCGGGTCTGGCTGGCCATTCTGTTGCCGGCCATGGCGGC
GGTCGTGTCGGCCACCATGATCGATCTCGACAAGTTCCGCGAGATGGACAAGGCCGAGCGCACCGGCCGGCTGGCCGGGC
TGACCATCGAGATCGGCGCCACCGTCCATGAGCTGCAAAAGGAACGCGGACTGTCCTCGGCCTTCCTGGCATCCAAGGGC
GCTCGCATGGCGGGCGAACGCGGCAAGCAGATGGAGACGACCAATCCGCGCCTCGCCACCCTGTCGGGAGCCATGGGGGG
CTTGGGCGACGGAATTGGCGAAGAACTGGCCTGGAGCATCGATAAGGCGAACCGCGACCTGGGCGGCCTTCAGGCGCTGC
GCGGCTCGGTGGACCGCCAGGACCTGACCGCGCCGCAGGCGGTGGGGCGCTATTCCGTGCTGATCGAATCGCTGCTGGGA
GTGGCCGAAAAGCTGACGGCCACCGAGACCGGCCAGGAGACCGGCAACCTGATCGCCGCCTATCTGGAGCTGATGCGGGC
CAAGGAGAACGCCGGCATCGAGCGCGCCACCGGCGCCGCCGCCCTGACCGCCGGCCTGGACGAGGGCTTCCGCCAGCGCA
TCGCCGCCTTGGCCGCGGTGCAGGACACCCATATTCGCGCCTATGCCGTGCGCGCCCTCCCCGCCCAGCGCCGCGCCCTG
CAGACGGTGCTGGAATCGTCGGCCGCCACCGAGGTGGCCGGATATCGCAAGCTGATCCTGGACGGAGCCCCCGGCGACCT
GACGCCCGAACGCTGGTTCACCGCCGCCACCCGCCGCATTGACCTGATGAAGGGCGTCGAGGATGCCCTGGCCGCCGATC
TGTCGGCCGGCATCGCCGCCATCCGGGCCGAGGCAGCGCGGGCCGCCGCCGCCATCACCGCGGCGCTGGTGCTTGCCCTG
GCCGCCGGCGCCGCGGTGGTGATCGTGCTGACCCGCTCCATCACCCGCCCGGTCGGCGATCTCACCACCGCCATGCTGCG
GTTGGCCGAACGCGACCTCTCCGTCCAGGTGACGGGCGGAGACCGGGGAGACGAAATCGGCGACATGGCCCGCGCCGTGG
CGGTGTTCAAGGAGAATGCCGCCGCCGTGGCCCGGCTGGAGGAGGAGCAGGAGCGCGCCCGCGCCCTGGCCGAAGCCGAA
CGCCGCGCCGCCCTGCAGGCCATGGCCTCGACCATCGAGACCGAGACCGGCCAGGTGGTCGCCAAGGTGGAAGGCGGCAG
CCGTCAGGCGGTCAGCGCCGCCGAAAGCATGGCGGCTTCGGCCATACGGGTCGAGGATAATTCCCAGCGGGTCGCGGCCG
CCGCCGAGCAGAGCCTGGCCAACGCCCAGACCGTGGCCGGCGCCGCCGAGGAACTGACCGCCTCCATCCGCGAGATCGCC
AGTCAGGTCGCCTCGTCGTCCTCCCTGGTGGCCGAAGCGGTGGTCGCCGCCGACGATGCCAATACCACCGTCGCCACCTT
GCTGGACGCCGTCAGCCGCATCGACACCGTGGTGGCGATGATCGCCGCCATTGCCGGCCAGACCCGGCTGCTCGCCCTCA
ACGCCACCATCGAATCGGCCCGGGCCGGCGAAGCGGGCAAGGGCTTTGCCGTGGTGGCCTCGGAGGTCAAGCGCCTCGCC
GACCAGACCGGCGGCCAGACCGGCGAGATCGCCGGCCGCATCGAGGAGTTGAAGGCCATGGCCGCCCATGTGGGCGAAGC
CATCTCGGCCACCGTCGGCGTCATCCGCAAGGTGGAGACCATCGCCAGTTCGGTGGCCGCCGCCGTCGAGGAGCAGGACG
CCGCCACCGGCGAAATCGCCCGCAACGTCCATCAATCGGCCGAAGCGGCCCGCGAGGTGACCGAGCGCATCATCGTCGTG
GCCGACGAGGCGCGGCGCAGCGGCGCCGAAGCCACTTCGGTCACCGCCTTGCTGGGCGAGATGGCCGCGCAGGTGGGTGA
ACTGGGACTGGTGCTCAACCGGGTGGTGCGCACCGCCGCCCCCGAGGTGGACCGCCGCCAGGTGCCACGCCCGGAGCCGC
AGCCCCGAAGCACCGCCTCCGTCGTGCAGCCCCGCCCGGCGGCGGAGAGCCTGGACATGGCCCTGACGCCGGAGATGCAA
CCCGCCTGA

Upstream 100 bases:

>100_bases
CGGCATTTTAAATGCTCGTATTGCCGGTTGCCGAGGACATGTGAAGGAGTGACGCGGCGCAGGGAGATCGCCGTGTCGTT
CCAGGCAAGCGGGGGGGAAA

Downstream 100 bases:

>100_bases
CCTGATTTTCCCGAAGCGGCACGCTTGCATCCCGAATCCATTTGTGTATAGTGCGCCCCTTCCAACCCTTGCCGGCTCCC
GAAAGGGGGTAACGGCTATG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 722; Mature: 722

Protein sequence:

>722_residues
MMIAALTSNLKIGRRVWLAILLPAMAAVVSATMIDLDKFREMDKAERTGRLAGLTIEIGATVHELQKERGLSSAFLASKG
ARMAGERGKQMETTNPRLATLSGAMGGLGDGIGEELAWSIDKANRDLGGLQALRGSVDRQDLTAPQAVGRYSVLIESLLG
VAEKLTATETGQETGNLIAAYLELMRAKENAGIERATGAAALTAGLDEGFRQRIAALAAVQDTHIRAYAVRALPAQRRAL
QTVLESSAATEVAGYRKLILDGAPGDLTPERWFTAATRRIDLMKGVEDALAADLSAGIAAIRAEAARAAAAITAALVLAL
AAGAAVVIVLTRSITRPVGDLTTAMLRLAERDLSVQVTGGDRGDEIGDMARAVAVFKENAAAVARLEEEQERARALAEAE
RRAALQAMASTIETETGQVVAKVEGGSRQAVSAAESMAASAIRVEDNSQRVAAAAEQSLANAQTVAGAAEELTASIREIA
SQVASSSSLVAEAVVAADDANTTVATLLDAVSRIDTVVAMIAAIAGQTRLLALNATIESARAGEAGKGFAVVASEVKRLA
DQTGGQTGEIAGRIEELKAMAAHVGEAISATVGVIRKVETIASSVAAAVEEQDAATGEIARNVHQSAEAAREVTERIIVV
ADEARRSGAEATSVTALLGEMAAQVGELGLVLNRVVRTAAPEVDRRQVPRPEPQPRSTASVVQPRPAAESLDMALTPEMQ
PA

Sequences:

>Translated_722_residues
MMIAALTSNLKIGRRVWLAILLPAMAAVVSATMIDLDKFREMDKAERTGRLAGLTIEIGATVHELQKERGLSSAFLASKG
ARMAGERGKQMETTNPRLATLSGAMGGLGDGIGEELAWSIDKANRDLGGLQALRGSVDRQDLTAPQAVGRYSVLIESLLG
VAEKLTATETGQETGNLIAAYLELMRAKENAGIERATGAAALTAGLDEGFRQRIAALAAVQDTHIRAYAVRALPAQRRAL
QTVLESSAATEVAGYRKLILDGAPGDLTPERWFTAATRRIDLMKGVEDALAADLSAGIAAIRAEAARAAAAITAALVLAL
AAGAAVVIVLTRSITRPVGDLTTAMLRLAERDLSVQVTGGDRGDEIGDMARAVAVFKENAAAVARLEEEQERARALAEAE
RRAALQAMASTIETETGQVVAKVEGGSRQAVSAAESMAASAIRVEDNSQRVAAAAEQSLANAQTVAGAAEELTASIREIA
SQVASSSSLVAEAVVAADDANTTVATLLDAVSRIDTVVAMIAAIAGQTRLLALNATIESARAGEAGKGFAVVASEVKRLA
DQTGGQTGEIAGRIEELKAMAAHVGEAISATVGVIRKVETIASSVAAAVEEQDAATGEIARNVHQSAEAAREVTERIIVV
ADEARRSGAEATSVTALLGEMAAQVGELGLVLNRVVRTAAPEVDRRQVPRPEPQPRSTASVVQPRPAAESLDMALTPEMQ
PA
>Mature_722_residues
MMIAALTSNLKIGRRVWLAILLPAMAAVVSATMIDLDKFREMDKAERTGRLAGLTIEIGATVHELQKERGLSSAFLASKG
ARMAGERGKQMETTNPRLATLSGAMGGLGDGIGEELAWSIDKANRDLGGLQALRGSVDRQDLTAPQAVGRYSVLIESLLG
VAEKLTATETGQETGNLIAAYLELMRAKENAGIERATGAAALTAGLDEGFRQRIAALAAVQDTHIRAYAVRALPAQRRAL
QTVLESSAATEVAGYRKLILDGAPGDLTPERWFTAATRRIDLMKGVEDALAADLSAGIAAIRAEAARAAAAITAALVLAL
AAGAAVVIVLTRSITRPVGDLTTAMLRLAERDLSVQVTGGDRGDEIGDMARAVAVFKENAAAVARLEEEQERARALAEAE
RRAALQAMASTIETETGQVVAKVEGGSRQAVSAAESMAASAIRVEDNSQRVAAAAEQSLANAQTVAGAAEELTASIREIA
SQVASSSSLVAEAVVAADDANTTVATLLDAVSRIDTVVAMIAAIAGQTRLLALNATIESARAGEAGKGFAVVASEVKRLA
DQTGGQTGEIAGRIEELKAMAAHVGEAISATVGVIRKVETIASSVAAAVEEQDAATGEIARNVHQSAEAAREVTERIIVV
ADEARRSGAEATSVTALLGEMAAQVGELGLVLNRVVRTAAPEVDRRQVPRPEPQPRSTASVVQPRPAAESLDMALTPEMQ
PA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=312, Percent_Identity=29.4871794871795, Blast_Score=93, Evalue=7e-20,
Organism=Escherichia coli, GI1789453, Length=362, Percent_Identity=27.0718232044199, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1788194, Length=284, Percent_Identity=30.2816901408451, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1788195, Length=181, Percent_Identity=33.7016574585635, Blast_Score=79, Evalue=2e-15,
Organism=Escherichia coli, GI2367378, Length=195, Percent_Identity=29.2307692307692, Blast_Score=74, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 74913; Mature: 74913

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMIAALTSNLKIGRRVWLAILLPAMAAVVSATMIDLDKFREMDKAERTGRLAGLTIEIGA
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECH
TVHELQKERGLSSAFLASKGARMAGERGKQMETTNPRLATLSGAMGGLGDGIGEELAWSI
HHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHH
DKANRDLGGLQALRGSVDRQDLTAPQAVGRYSVLIESLLGVAEKLTATETGQETGNLIAA
HHHCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YLELMRAKENAGIERATGAAALTAGLDEGFRQRIAALAAVQDTHIRAYAVRALPAQRRAL
HHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
QTVLESSAATEVAGYRKLILDGAPGDLTPERWFTAATRRIDLMKGVEDALAADLSAGIAA
HHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAEAARAAAAITAALVLALAAGAAVVIVLTRSITRPVGDLTTAMLRLAERDLSVQVTGG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCC
DRGDEIGDMARAVAVFKENAAAVARLEEEQERARALAEAERRAALQAMASTIETETGQVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
AKVEGGSRQAVSAAESMAASAIRVEDNSQRVAAAAEQSLANAQTVAGAAEELTASIREIA
EEECCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQVASSSSLVAEAVVAADDANTTVATLLDAVSRIDTVVAMIAAIAGQTRLLALNATIESA
HHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH
RAGEAGKGFAVVASEVKRLADQTGGQTGEIAGRIEELKAMAAHVGEAISATVGVIRKVET
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASSVAAAVEEQDAATGEIARNVHQSAEAAREVTERIIVVADEARRSGAEATSVTALLGE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHCCCCHHHHHHHHHHH
MAAQVGELGLVLNRVVRTAAPEVDRRQVPRPEPQPRSTASVVQPRPAAESLDMALTPEMQ
HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHCCCCCCHHHCCCEECCCCC
PA
CC
>Mature Secondary Structure
MMIAALTSNLKIGRRVWLAILLPAMAAVVSATMIDLDKFREMDKAERTGRLAGLTIEIGA
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECH
TVHELQKERGLSSAFLASKGARMAGERGKQMETTNPRLATLSGAMGGLGDGIGEELAWSI
HHHHHHHHCCCHHHHHHHCCCHHHHHCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHH
DKANRDLGGLQALRGSVDRQDLTAPQAVGRYSVLIESLLGVAEKLTATETGQETGNLIAA
HHHCCCHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
YLELMRAKENAGIERATGAAALTAGLDEGFRQRIAALAAVQDTHIRAYAVRALPAQRRAL
HHHHHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
QTVLESSAATEVAGYRKLILDGAPGDLTPERWFTAATRRIDLMKGVEDALAADLSAGIAA
HHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRAEAARAAAAITAALVLALAAGAAVVIVLTRSITRPVGDLTTAMLRLAERDLSVQVTGG
HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCEEEECCC
DRGDEIGDMARAVAVFKENAAAVARLEEEQERARALAEAERRAALQAMASTIETETGQVV
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
AKVEGGSRQAVSAAESMAASAIRVEDNSQRVAAAAEQSLANAQTVAGAAEELTASIREIA
EEECCCCHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQVASSSSLVAEAVVAADDANTTVATLLDAVSRIDTVVAMIAAIAGQTRLLALNATIESA
HHHHCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH
RAGEAGKGFAVVASEVKRLADQTGGQTGEIAGRIEELKAMAAHVGEAISATVGVIRKVET
CCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IASSVAAAVEEQDAATGEIARNVHQSAEAAREVTERIIVVADEARRSGAEATSVTALLGE
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHCCCCHHHHHHHHHHH
MAAQVGELGLVLNRVVRTAAPEVDRRQVPRPEPQPRSTASVVQPRPAAESLDMALTPEMQ
HHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCHHHCCCCCCHHHCCCEECCCCC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]