| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311156
Identifier: 83311156
GI number: 83311156
Start: 2240558
End: 2241946
Strand: Reverse
Name: 83311156
Synonym: amb2057
Alternate gene names: NA
Gene position: 2241946-2240558 (Counterclockwise)
Preceding gene: 83311157
Following gene: 83311155
Centisome position: 45.14
GC content: 58.32
Gene sequence:
>1389_bases ATGAAACCCGCCATCAAGCCCCACCTGGACGTCCCTCTGATTCTCGCCCCCGAAAGGATGTCGAGCATCATCCGCTCCCC TGGTGGGAAGCACCGTCTGGCTCGTGATCTGGTCAACCTCGCCCCGTTCACGATCAGCGAGTACCGGGAACCTTTCGCGG GGAGTGCCGCTGTTGCCTTTCGCATGGTCCGGGCGGGACGTACCCGGAAAATCTGGATCAACGATCTCGATCCCGGCATC GCCAATATGTGGACCGTGGTTCGCGACGATCCTGCTGGGCTGATCCGGGTTTTGCGTTCTCTCCATGGCCGGTTCGGGGC GGGCAGCAAAGAGTTGTTTGATCTGTCCGTCCAGATGGTCGAGAGCGACGATCGCACTGAAGCGGCGGCGGCATTCTATA CCCGCAACCACTTGAGCATGTACGGGGCCAACGGCATGTCGTCGTATGCCCCGAGCCATCCGCGTGATGATCGCGGACTC CGACCGATCCACATCAATTACATCCCCCAGTTTTCGGCGTGGCTTCAAGGTGCCCGGATCACCAATTTGGATTACCGGGA AGTTCTTGATGCCCCTGGTGCCGGGGTGATGTGCTTCGTTGATCCGCCCTATGCCCAGGTGGGCAAGGCCATGTACCCCT TTGGCGAGGCCGATCTGGAAGAGCTTGCTCGACATGTACGTGCCAGCGGCCATTCCTGCTTGATCACGGTGGACGACAGT CCGGCGAACCGTGTCGCATTCTCGGACATGCATCCCATTCTCCATGCCTTCATGAGCAACATGGGCAATATCCACAAATC GGCGGAACTGGTGTGTGCGAATTACACCACCCCGCTCTACACGGTCCATGCCAGGAAAATTGGGGAGGAGATCGAGCCGA TTGCCCCGGTGATTATGCCCAACAACGACATGGTGCCAGTGGTGGCGTCCCAGTCGTCCAACGACGATTCACCTGCTGGT GAACCCACGAAGAAGGAATGGAAGGCACGGACCCTTTTCATCACCAAGGCGAACCAAAAGAAGAATTGCGAATGGTATAC TCCGCCCAGTTTGCTCAGCCAAATCTACGCCGCCAATGACAACCAGCCCTTCGACATCGACCCTTGCTCGCCATGCAAAG GGGAGAACGCTCCGGTTTGGGCACGCCAGCATTTCACCCAGGCCGAAGACGGATTGGCTCAAAATTGGCACGGTCGTGTT TGGCTGAACCCCCCGTATCATAGCCTTCGTCACTGGGTCGAAAAAGCCGCCGATGCTGTGTGGTGCCGTCACATGCCTGA CGCTCCAACCGAAGCCTCTGCTGTTCGTGACCTGCCCTTGTGCGAAATCCGTGGTCGGCATTATCCCTGTTCGCACCCAC ACGAGCTACTGGCGGAAATTCGTGAGTGA
Upstream 100 bases:
>100_bases GCTCGGGGTTCTGGAAGGAATACAGCCGTAAGCACCGTGCCGAGATTCGCCGCCTGACGAAAAACAGCAATGACAATCAG AAATTCAAGGAGGCCATGTG
Downstream 100 bases:
>100_bases ACATGCCTGCGTGTTCTTCATCGCTGGCAAGGTCGGATTCTTGAAGGGTATTGATGGTAAAGGCATCGAAGTTCAATCCC GGATGCCCGAGGGCTTGGCC
Product: site-specific DNA methylase
Products: NA
Alternate protein names: Cytosine-Specific DNA Methyltransferase; Site-Specific DNA Methylase; DNA Methyltransferase; Adenine Specific DNA Methyltransferase; DNA-Methyltransferase; Methylase
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MKPAIKPHLDVPLILAPERMSSIIRSPGGKHRLARDLVNLAPFTISEYREPFAGSAAVAFRMVRAGRTRKIWINDLDPGI ANMWTVVRDDPAGLIRVLRSLHGRFGAGSKELFDLSVQMVESDDRTEAAAAFYTRNHLSMYGANGMSSYAPSHPRDDRGL RPIHINYIPQFSAWLQGARITNLDYREVLDAPGAGVMCFVDPPYAQVGKAMYPFGEADLEELARHVRASGHSCLITVDDS PANRVAFSDMHPILHAFMSNMGNIHKSAELVCANYTTPLYTVHARKIGEEIEPIAPVIMPNNDMVPVVASQSSNDDSPAG EPTKKEWKARTLFITKANQKKNCEWYTPPSLLSQIYAANDNQPFDIDPCSPCKGENAPVWARQHFTQAEDGLAQNWHGRV WLNPPYHSLRHWVEKAADAVWCRHMPDAPTEASAVRDLPLCEIRGRHYPCSHPHELLAEIRE
Sequences:
>Translated_462_residues MKPAIKPHLDVPLILAPERMSSIIRSPGGKHRLARDLVNLAPFTISEYREPFAGSAAVAFRMVRAGRTRKIWINDLDPGI ANMWTVVRDDPAGLIRVLRSLHGRFGAGSKELFDLSVQMVESDDRTEAAAAFYTRNHLSMYGANGMSSYAPSHPRDDRGL RPIHINYIPQFSAWLQGARITNLDYREVLDAPGAGVMCFVDPPYAQVGKAMYPFGEADLEELARHVRASGHSCLITVDDS PANRVAFSDMHPILHAFMSNMGNIHKSAELVCANYTTPLYTVHARKIGEEIEPIAPVIMPNNDMVPVVASQSSNDDSPAG EPTKKEWKARTLFITKANQKKNCEWYTPPSLLSQIYAANDNQPFDIDPCSPCKGENAPVWARQHFTQAEDGLAQNWHGRV WLNPPYHSLRHWVEKAADAVWCRHMPDAPTEASAVRDLPLCEIRGRHYPCSHPHELLAEIRE >Mature_462_residues MKPAIKPHLDVPLILAPERMSSIIRSPGGKHRLARDLVNLAPFTISEYREPFAGSAAVAFRMVRAGRTRKIWINDLDPGI ANMWTVVRDDPAGLIRVLRSLHGRFGAGSKELFDLSVQMVESDDRTEAAAAFYTRNHLSMYGANGMSSYAPSHPRDDRGL RPIHINYIPQFSAWLQGARITNLDYREVLDAPGAGVMCFVDPPYAQVGKAMYPFGEADLEELARHVRASGHSCLITVDDS PANRVAFSDMHPILHAFMSNMGNIHKSAELVCANYTTPLYTVHARKIGEEIEPIAPVIMPNNDMVPVVASQSSNDDSPAG EPTKKEWKARTLFITKANQKKNCEWYTPPSLLSQIYAANDNQPFDIDPCSPCKGENAPVWARQHFTQAEDGLAQNWHGRV WLNPPYHSLRHWVEKAADAVWCRHMPDAPTEASAVRDLPLCEIRGRHYPCSHPHELLAEIRE
Specific function: Unknown
COG id: COG0338
COG function: function code L; Site-specific DNA methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51634; Mature: 51634
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPAIKPHLDVPLILAPERMSSIIRSPGGKHRLARDLVNLAPFTISEYREPFAGSAAVAF CCCCCCCCCCCCEEECHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHH RMVRAGRTRKIWINDLDPGIANMWTVVRDDPAGLIRVLRSLHGRFGAGSKELFDLSVQMV HHHHCCCCEEEEEECCCCCHHHHEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHEE ESDDRTEAAAAFYTRNHLSMYGANGMSSYAPSHPRDDRGLRPIHINYIPQFSAWLQGARI CCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEE TNLDYREVLDAPGAGVMCFVDPPYAQVGKAMYPFGEADLEELARHVRASGHSCLITVDDS CCCCHHHHHCCCCCCEEEEECCCHHHHCCHHCCCCHHHHHHHHHHHHCCCCEEEEEECCC PANRVAFSDMHPILHAFMSNMGNIHKSAELVCANYTTPLYTVHARKIGEEIEPIAPVIMP CCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCCCEEEC NNDMVPVVASQSSNDDSPAGEPTKKEWKARTLFITKANQKKNCEWYTPPSLLSQIYAAND CCCEEEEEECCCCCCCCCCCCCCHHHHCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCC NQPFDIDPCSPCKGENAPVWARQHFTQAEDGLAQNWHGRVWLNPPYHSLRHWVEKAADAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH WCRHMPDAPTEASAVRDLPLCEIRGRHYPCSHPHELLAEIRE HHHCCCCCCCHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKPAIKPHLDVPLILAPERMSSIIRSPGGKHRLARDLVNLAPFTISEYREPFAGSAAVAF CCCCCCCCCCCCEEECHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHH RMVRAGRTRKIWINDLDPGIANMWTVVRDDPAGLIRVLRSLHGRFGAGSKELFDLSVQMV HHHHCCCCEEEEEECCCCCHHHHEEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHEE ESDDRTEAAAAFYTRNHLSMYGANGMSSYAPSHPRDDRGLRPIHINYIPQFSAWLQGARI CCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHCCCEE TNLDYREVLDAPGAGVMCFVDPPYAQVGKAMYPFGEADLEELARHVRASGHSCLITVDDS CCCCHHHHHCCCCCCEEEEECCCHHHHCCHHCCCCHHHHHHHHHHHHCCCCEEEEEECCC PANRVAFSDMHPILHAFMSNMGNIHKSAELVCANYTTPLYTVHARKIGEEIEPIAPVIMP CCCCEEHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEHHHHHHHHHCCCCCEEEC NNDMVPVVASQSSNDDSPAGEPTKKEWKARTLFITKANQKKNCEWYTPPSLLSQIYAAND CCCEEEEEECCCCCCCCCCCCCCHHHHCEEEEEEEECCCCCCCCCCCCHHHHHHHHHCCC NQPFDIDPCSPCKGENAPVWARQHFTQAEDGLAQNWHGRVWLNPPYHSLRHWVEKAADAV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHH WCRHMPDAPTEASAVRDLPLCEIRGRHYPCSHPHELLAEIRE HHHCCCCCCCHHHHHHCCCCHHCCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA