| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311134
Identifier: 83311134
GI number: 83311134
Start: 2213123
End: 2213569
Strand: Reverse
Name: 83311134
Synonym: amb2035
Alternate gene names: NA
Gene position: 2213569-2213123 (Counterclockwise)
Preceding gene: 83311135
Following gene: 83311133
Centisome position: 44.56
GC content: 55.26
Gene sequence:
>447_bases ATGCCGAATGACAGCGTGGAATTCTCAGACGATGCCACTGAGCTTTACCTGCGGGAGTATTACGCTATCTTCGGCAGCGT ACCGCAGATTTGGCACACCGTATTTTCCAGGTTAATCCCGCTTAAGATCGCAAGCTGGGGCTACCTGAAGGCAGGAACGC ACCTGATCCCTATTCCGTTCGTGCCAGACCATGAGACGGTGGAGCGGAGCAACAATGGGGTTTCCACCACCATGACCCCG AGCCAGTACGGTATCTTTGTTTCAGCCGTGGTTTTCAGCCAGTTGGCCGTTGCCCTCCAGCATGACCCGAACTTTCTGGC CCTCAGCTTCATCAATGGCCTGGACATGAACAAGGCCATTGACTGGTATCGCGGGTGCATGAACGCCCTCTGGGCATTTG CCAAGGATGATCCGACCTGGACCTGCGTTGCCGACCAGTTGGATTGA
Upstream 100 bases:
>100_bases TCAGAATGCACCGGAAGCAGCGGCAATCGATGATCCGGCGTACACCCCGACAACACTATTCTACGACATTGTGCTTTCGT CGGACAATGCGACGCTCTTC
Downstream 100 bases:
>100_bases CCGCCATGAAAAAATTCGAGCGTGAACTTCGCAAAGCCTATGGCGATGAGTGGGAGGTGAGCAGAACAGGGGGTGACCAC TACCGTCTTGTCCACCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MPNDSVEFSDDATELYLREYYAIFGSVPQIWHTVFSRLIPLKIASWGYLKAGTHLIPIPFVPDHETVERSNNGVSTTMTP SQYGIFVSAVVFSQLAVALQHDPNFLALSFINGLDMNKAIDWYRGCMNALWAFAKDDPTWTCVADQLD
Sequences:
>Translated_148_residues MPNDSVEFSDDATELYLREYYAIFGSVPQIWHTVFSRLIPLKIASWGYLKAGTHLIPIPFVPDHETVERSNNGVSTTMTP SQYGIFVSAVVFSQLAVALQHDPNFLALSFINGLDMNKAIDWYRGCMNALWAFAKDDPTWTCVADQLD >Mature_147_residues PNDSVEFSDDATELYLREYYAIFGSVPQIWHTVFSRLIPLKIASWGYLKAGTHLIPIPFVPDHETVERSNNGVSTTMTPS QYGIFVSAVVFSQLAVALQHDPNFLALSFINGLDMNKAIDWYRGCMNALWAFAKDDPTWTCVADQLD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16666; Mature: 16535
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNDSVEFSDDATELYLREYYAIFGSVPQIWHTVFSRLIPLKIASWGYLKAGTHLIPIPF CCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC VPDHETVERSNNGVSTTMTPSQYGIFVSAVVFSQLAVALQHDPNFLALSFINGLDMNKAI CCCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH DWYRGCMNALWAFAKDDPTWTCVADQLD HHHHHHHHHHHHHCCCCCCEEEECCCCC >Mature Secondary Structure PNDSVEFSDDATELYLREYYAIFGSVPQIWHTVFSRLIPLKIASWGYLKAGTHLIPIPF CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCC VPDHETVERSNNGVSTTMTPSQYGIFVSAVVFSQLAVALQHDPNFLALSFINGLDMNKAI CCCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHH DWYRGCMNALWAFAKDDPTWTCVADQLD HHHHHHHHHHHHHCCCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA