| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311115
Identifier: 83311115
GI number: 83311115
Start: 2191600
End: 2193132
Strand: Reverse
Name: 83311115
Synonym: amb2016
Alternate gene names: NA
Gene position: 2193132-2191600 (Counterclockwise)
Preceding gene: 83311122
Following gene: 83311112
Centisome position: 44.15
GC content: 68.82
Gene sequence:
>1533_bases ATGGCCAGCGCGCCGGAGGCATTCCCCGAGGCGACCAGCCCGCGCCGGTACAACATCCAGGCCCCTTCCCGCGCCAGTCC GGCGGCCAGGGCCCAGGCCAGCACCGCCGGAGCGGGCTCGGCGAACAGGGCCAGCAGCCCCGCCCCCTCGGCCAGCCCGG ACGTGATGATCAGGGGGACGATCTCCGCCTGCTTCCAGGCGGGAATGCCGCGCGACGCCCGCAGAATGCGCGACTGGCAA TACAGGAACCCGGCGGCCAAAACCACCAGGGGCACCAGCAGGGCGGGATGGCCCAACAGCCAGTACCCGCCGCCCACCGC CATCAGCGGCCCGGCAACGATGCCTTCGCGGGTCATCCACGAGGTCTGGGGATGGAAGAAGACGTTGAGGGCCCGCCAGG GCTTGCCGATCTCCAGCCAGACCATGGCCAGGCCCAGCCCGACCAGCGCCAGACCGGCCACCAGGGACAGCCCGCCGTCG CCCAGCAGGACGCTGGCCAGCACCAGACCGGTTCCGGCCCCGCCACCGATGAAATTGCCGGCGGCGCGCAAATCCCAGCT CCGTTGCAGCCGGGCGGTGATCATCTGCCTCATGGCCGTCCTCCGTTCCTGTCATCCCGACGACCACCGGAAGGAGGGAT CTCGTCCTGGCGCGACGTTTCGGAATTCGCACCGCCATCCCAGGCTGAGATCCCTCGCTCGCGCTCGGGATGACATCCGG AATGGTTGCCCGCTGAAGCCTGCCTCATGGCCGTCCTCCGTCCCACAGGTAATAGAATCCCGGCCCCGTGCCCTCGTCCT CGTGCTGGCGGAACCATTTGTTGTCGCCGACCAGCCGCGACACGACGCTGTCGGGGTCCTCGATATCGCCGAAGCGCAGG GCGCCCGACAGGCAGGAATTGACGCAGGCCGGCGTGGCCTCGGGGTGGATTCCGGGCACCTTGCCCGCCTTGACGCCGGC ATCGATGCGCTCGACGCAGAAGGTGCATTTGGTGACCACGCCGATCTTCTGCTGGGCGGCGCGAGCCTTCTCCTGGGAGA TGGGGCCGGCGCCGTAGACGTACTCGGCCGACTCCACCTTGTAACGGGCCTCGTAGGGGCACGAGACGGCGCAGTAGGAA CAGCCGATGCAGATGTCGTAGTCGATGGTGACGATGCCGTCGTCGCGCTTGCGGGTGGCGGTCGAAGGACAGACCTCCAT GCAGGGCGGCTGGTCGCAATGCTGGCAGCCGGTGGGCAGGAAGATGCGCCGCACGTCGGGGTATTGCCCGGCCTCGATGT CGAGGACCTTGCGCCACTGCACGCCGGGCGGCGTGGCGTTGGTTTCCTTGCAGGATGCCGTGCAGGTCTGGCAGCCGACG CAGCGCCGCAGGTCGGCGACCATCACATAGCGGGTCATGCCGGTTCTCCCGGCCCGTCGACCCGTCGCAGCGCCACCCGC ACCACGTCGGCGCCCGAGCCGGTGGCGTCGGTCAGTTCCAGCGACATCTGGGTGATGGTGTTCAACGACGGGAAGTTGAG GTCCTTGGCATAG
Upstream 100 bases:
>100_bases GGCCAGCGGGGCCACCGGCAATCCGGCCAGGGCCAGGAGCCACAGCGCCAGGGCGAGTCCCTGCGCCATCCGCGCCGCCT GGGCCGGGCCGGACCCAAAG
Downstream 100 bases:
>100_bases GGCGTCTTCCAATGCTGGAACTGGCCGGGAATGACCACGGTGTCGGGACGGCAGCCCTGGACCAGGGCGGCCCGGCCGCG GGTGTGGCCCACCACCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MASAPEAFPEATSPRRYNIQAPSRASPAARAQASTAGAGSANRASSPAPSASPDVMIRGTISACFQAGMPRDARRMRDWQ YRNPAAKTTRGTSRAGWPNSQYPPPTAISGPATMPSRVIHEVWGWKKTLRARQGLPISSQTMARPSPTSARPATRDSPPS PSRTLASTRPVPAPPPMKLPAARKSQLRCSRAVIICLMAVLRSCHPDDHRKEGSRPGATFRNSHRHPRLRSLARARDDIR NGCPLKPASWPSSVPQVIESRPRALVLVLAEPFVVADQPRHDAVGVLDIAEAQGARQAGIDAGRRGLGVDSGHLARLDAG IDALDAEGAFGDHADLLLGGASLLLGDGAGAVDVLGRLHLVTGLVGARDGAVGTADADVVVDGDDAVVALAGGGRRTDLH AGRLVAMLAAGGQEDAPHVGVLPGLDVEDLAPLHAGRRGVGFLAGCRAGLAADAAPQVGDHHIAGHAGSPGPSTRRSATR TTSAPEPVASVSSSDIWVMVFNDGKLRSLA
Sequences:
>Translated_510_residues MASAPEAFPEATSPRRYNIQAPSRASPAARAQASTAGAGSANRASSPAPSASPDVMIRGTISACFQAGMPRDARRMRDWQ YRNPAAKTTRGTSRAGWPNSQYPPPTAISGPATMPSRVIHEVWGWKKTLRARQGLPISSQTMARPSPTSARPATRDSPPS PSRTLASTRPVPAPPPMKLPAARKSQLRCSRAVIICLMAVLRSCHPDDHRKEGSRPGATFRNSHRHPRLRSLARARDDIR NGCPLKPASWPSSVPQVIESRPRALVLVLAEPFVVADQPRHDAVGVLDIAEAQGARQAGIDAGRRGLGVDSGHLARLDAG IDALDAEGAFGDHADLLLGGASLLLGDGAGAVDVLGRLHLVTGLVGARDGAVGTADADVVVDGDDAVVALAGGGRRTDLH AGRLVAMLAAGGQEDAPHVGVLPGLDVEDLAPLHAGRRGVGFLAGCRAGLAADAAPQVGDHHIAGHAGSPGPSTRRSATR TTSAPEPVASVSSSDIWVMVFNDGKLRSLA >Mature_509_residues ASAPEAFPEATSPRRYNIQAPSRASPAARAQASTAGAGSANRASSPAPSASPDVMIRGTISACFQAGMPRDARRMRDWQY RNPAAKTTRGTSRAGWPNSQYPPPTAISGPATMPSRVIHEVWGWKKTLRARQGLPISSQTMARPSPTSARPATRDSPPSP SRTLASTRPVPAPPPMKLPAARKSQLRCSRAVIICLMAVLRSCHPDDHRKEGSRPGATFRNSHRHPRLRSLARARDDIRN GCPLKPASWPSSVPQVIESRPRALVLVLAEPFVVADQPRHDAVGVLDIAEAQGARQAGIDAGRRGLGVDSGHLARLDAGI DALDAEGAFGDHADLLLGGASLLLGDGAGAVDVLGRLHLVTGLVGARDGAVGTADADVVVDGDDAVVALAGGGRRTDLHA GRLVAMLAAGGQEDAPHVGVLPGLDVEDLAPLHAGRRGVGFLAGCRAGLAADAAPQVGDHHIAGHAGSPGPSTRRSATRT TSAPEPVASVSSSDIWVMVFNDGKLRSLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52924; Mature: 52793
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAPEAFPEATSPRRYNIQAPSRASPAARAQASTAGAGSANRASSPAPSASPDVMIRGT CCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEC ISACFQAGMPRDARRMRDWQYRNPAAKTTRGTSRAGWPNSQYPPPTAISGPATMPSRVIH HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH EVWGWKKTLRARQGLPISSQTMARPSPTSARPATRDSPPSPSRTLASTRPVPAPPPMKLP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC AARKSQLRCSRAVIICLMAVLRSCHPDDHRKEGSRPGATFRNSHRHPRLRSLARARDDIR CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH NGCPLKPASWPSSVPQVIESRPRALVLVLAEPFVVADQPRHDAVGVLDIAEAQGARQAGI CCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCEEEEHHHHCCCHHHCH DAGRRGLGVDSGHLARLDAGIDALDAEGAFGDHADLLLGGASLLLGDGAGAVDVLGRLHL HHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHH VTGLVGARDGAVGTADADVVVDGDDAVVALAGGGRRTDLHAGRLVAMLAAGGQEDAPHVG HHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCC VLPGLDVEDLAPLHAGRRGVGFLAGCRAGLAADAAPQVGDHHIAGHAGSPGPSTRRSATR CCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC TTSAPEPVASVSSSDIWVMVFNDGKLRSLA CCCCCCHHHHCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure ASAPEAFPEATSPRRYNIQAPSRASPAARAQASTAGAGSANRASSPAPSASPDVMIRGT CCCCCCCCCCCCCCEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEC ISACFQAGMPRDARRMRDWQYRNPAAKTTRGTSRAGWPNSQYPPPTAISGPATMPSRVIH HHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHH EVWGWKKTLRARQGLPISSQTMARPSPTSARPATRDSPPSPSRTLASTRPVPAPPPMKLP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCC AARKSQLRCSRAVIICLMAVLRSCHPDDHRKEGSRPGATFRNSHRHPRLRSLARARDDIR CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHH NGCPLKPASWPSSVPQVIESRPRALVLVLAEPFVVADQPRHDAVGVLDIAEAQGARQAGI CCCCCCCCCCCHHHHHHHHCCCCEEEEEEECCEEEECCCCCCCCEEEEHHHHCCCHHHCH DAGRRGLGVDSGHLARLDAGIDALDAEGAFGDHADLLLGGASLLLGDGAGAVDVLGRLHL HHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCEEEEECCCCHHHHHHHHHH VTGLVGARDGAVGTADADVVVDGDDAVVALAGGGRRTDLHAGRLVAMLAAGGQEDAPHVG HHHHHHCCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCC VLPGLDVEDLAPLHAGRRGVGFLAGCRAGLAADAAPQVGDHHIAGHAGSPGPSTRRSATR CCCCCCHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCC TTSAPEPVASVSSSDIWVMVFNDGKLRSLA CCCCCCHHHHCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA