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The map label for this gene is ygiF [C]

Identifier: 83311071

GI number: 83311071

Start: 2131301

End: 2132836

Strand: Reverse

Name: ygiF [C]

Synonym: amb1972

Alternate gene names: 83311071

Gene position: 2132836-2131301 (Counterclockwise)

Preceding gene: 83311072

Following gene: 83311068

Centisome position: 42.94

GC content: 69.14

Gene sequence:

>1536_bases
ATGGACGGCCGAGAAATCGAGTTGAAGCTGGCGCTGGCCCCCGAGGACTTGGCCCGCATCGCCCAGCGCCCCTGCCTGAG
TGCCGGACGGCTGGCCGAGCCGACGTCCAAGCGCCTGTCCTCGATCTATTTCGATACACCCGACTTCATCCTGGCGGCCC
AGGGCATCGCCGTCCGGGTGCGGCGAACCGGCTCCGGCTTCGTGCAGACGGTGAAGACTGCCGGAACCTCGGTGTCCGGC
CTGTTCGATCGCGACGAGTGGGAAGTGCCGGTACCGTCTTCCGAGCTGAACGCGGAACAATTGCGCCTGACCGGCCTTGC
CGCCTTTGCCGACGGGGAACTGGCCGACCGCCTGTCGCCGGTTTTCGCCACCGAGGTGGAGCGCAGCCTGTTCCGCCTGG
GCGGCGACGGCTGGGAGGCCGAGGTGGCGCTGGACCGGGGCGCGGTCATCGCCGGCGACCGGCGCGAAGAGATTTCCGAG
GTGGAATTGGAGCTGGTCAGCGGCACCCCTGCCCACCTGTTCCAACTGGCCGCCGGCATCCTGGAAGAAGCGGCGGCGCG
GCCCATGTGCCTGTCCAAATCGGAACGGGGATACAATCTGGCGGCCGGCAAGACCGCGCCGGTGGTCAAGGCCAAGTCCC
CCTCCCTCTCCACCGCCATGACGGTGGAAGACTCCTTCCGGGCCATCGCGCGCGCCTGCCTCGAGCATCTGATGCTCAAC
GAGCGCTGCCTGCTGGCCACCGAAGCGGGCGAGGCCATTCATCAGATGCGGGTCGCCATGCGCCGCCTGCGCTCGGCCAT
CAAGGTCTTCAAGACCGTTACCGCCGGTGCGGACCTGGCGCGGGTCAAGGACGACCTGCGCTGGCTGCTGGGCCATCTGG
GCCCGGCCCGCGATGCCGAGGTCTTCCTGTCGGAAATCGTCGCTCCGGTCATGGCCGCCCATCCCGACGATGCCGGACTA
GCCGCCCTGCACGCCCATTGGCGCAAGGACCGCGAGGCCAAGCTGGCCGCCGCCATCGCAGCAGTGAAATCCCGGCGCTA
CGCGGCCATGATCCTCAACCTGGGGCGCTGGGTTGAAACCGGCGACTGGCAGGCCCCGACCCATGGCGGGCCACGCCGCC
GGCTGGCCGAGCCCATCGCCGCCTTCGCCGCCCGTCGTGTCAGCAAGGCCGTCCGAAACCTGCTGAGGGAAGGCGGCGAA
TCCCTGTCACGGCTTTCGCCCGAACAGCGGCACGCGGTGCGCATCCGCGGCAAGCAGGTGCGCTATGCCGGCGAGTTCTT
CGCCTCGCTGGTGCCGCGCAAGACCACCAAGGTCTTCCTGGCCGAGTTGTCGGAATTACAAGATGTCCTGGGCCAACTCA
ACGATATCGCCGTGGCGGGACCCAAGCTGTCGGGGCGCGGCGCCGAAACGGGCTCGTCCCGCGCTGCCGGACTGGTCGCC
GGCTGGCATCAGAGCCGCCGCTCGGCCCTGCTGGGGGCGGCGGACAAGTGCTGGAAGCGCTGGCGCGCCATGCCGGTGCC
CTGGGAGGAGAAATAG

Upstream 100 bases:

>100_bases
TTCAGCCTGTCACGCATAATGCGTCAATGAAGGTTCACACTTTGCTAATGGCCGAACGCCCCAGGACTGGTATAGTTCGG
CGATCGACCGAGGGACCTTC

Downstream 100 bases:

>100_bases
GCTCCGGCCCTACCGGAAGACCCGATCCAGCAGCGGCGAAATATCCCCGGCGGGAACCGGCCGGCTGAACAGGTAGCCCT
GGGCGATGTCGCAGTTGATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MDGREIELKLALAPEDLARIAQRPCLSAGRLAEPTSKRLSSIYFDTPDFILAAQGIAVRVRRTGSGFVQTVKTAGTSVSG
LFDRDEWEVPVPSSELNAEQLRLTGLAAFADGELADRLSPVFATEVERSLFRLGGDGWEAEVALDRGAVIAGDRREEISE
VELELVSGTPAHLFQLAAGILEEAAARPMCLSKSERGYNLAAGKTAPVVKAKSPSLSTAMTVEDSFRAIARACLEHLMLN
ERCLLATEAGEAIHQMRVAMRRLRSAIKVFKTVTAGADLARVKDDLRWLLGHLGPARDAEVFLSEIVAPVMAAHPDDAGL
AALHAHWRKDREAKLAAAIAAVKSRRYAAMILNLGRWVETGDWQAPTHGGPRRRLAEPIAAFAARRVSKAVRNLLREGGE
SLSRLSPEQRHAVRIRGKQVRYAGEFFASLVPRKTTKVFLAELSELQDVLGQLNDIAVAGPKLSGRGAETGSSRAAGLVA
GWHQSRRSALLGAADKCWKRWRAMPVPWEEK

Sequences:

>Translated_511_residues
MDGREIELKLALAPEDLARIAQRPCLSAGRLAEPTSKRLSSIYFDTPDFILAAQGIAVRVRRTGSGFVQTVKTAGTSVSG
LFDRDEWEVPVPSSELNAEQLRLTGLAAFADGELADRLSPVFATEVERSLFRLGGDGWEAEVALDRGAVIAGDRREEISE
VELELVSGTPAHLFQLAAGILEEAAARPMCLSKSERGYNLAAGKTAPVVKAKSPSLSTAMTVEDSFRAIARACLEHLMLN
ERCLLATEAGEAIHQMRVAMRRLRSAIKVFKTVTAGADLARVKDDLRWLLGHLGPARDAEVFLSEIVAPVMAAHPDDAGL
AALHAHWRKDREAKLAAAIAAVKSRRYAAMILNLGRWVETGDWQAPTHGGPRRRLAEPIAAFAARRVSKAVRNLLREGGE
SLSRLSPEQRHAVRIRGKQVRYAGEFFASLVPRKTTKVFLAELSELQDVLGQLNDIAVAGPKLSGRGAETGSSRAAGLVA
GWHQSRRSALLGAADKCWKRWRAMPVPWEEK
>Mature_511_residues
MDGREIELKLALAPEDLARIAQRPCLSAGRLAEPTSKRLSSIYFDTPDFILAAQGIAVRVRRTGSGFVQTVKTAGTSVSG
LFDRDEWEVPVPSSELNAEQLRLTGLAAFADGELADRLSPVFATEVERSLFRLGGDGWEAEVALDRGAVIAGDRREEISE
VELELVSGTPAHLFQLAAGILEEAAARPMCLSKSERGYNLAAGKTAPVVKAKSPSLSTAMTVEDSFRAIARACLEHLMLN
ERCLLATEAGEAIHQMRVAMRRLRSAIKVFKTVTAGADLARVKDDLRWLLGHLGPARDAEVFLSEIVAPVMAAHPDDAGL
AALHAHWRKDREAKLAAAIAAVKSRRYAAMILNLGRWVETGDWQAPTHGGPRRRLAEPIAAFAARRVSKAVRNLLREGGE
SLSRLSPEQRHAVRIRGKQVRYAGEFFASLVPRKTTKVFLAELSELQDVLGQLNDIAVAGPKLSGRGAETGSSRAAGLVA
GWHQSRRSALLGAADKCWKRWRAMPVPWEEK

Specific function: Unknown

COG id: COG3025

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ygiF [H]

Homologues:

Organism=Escherichia coli, GI1789434, Length=211, Percent_Identity=33.175355450237, Blast_Score=104, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008172
- InterPro:   IPR004206 [H]

Pfam domain/function: PF01928 CYTH [H]

EC number: NA

Molecular weight: Translated: 55556; Mature: 55556

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGREIELKLALAPEDLARIAQRPCLSAGRLAEPTSKRLSSIYFDTPDFILAAQGIAVRV
CCCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCEEEEE
RRTGSGFVQTVKTAGTSVSGLFDRDEWEVPVPSSELNAEQLRLTGLAAFADGELADRLSP
EECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
VFATEVERSLFRLGGDGWEAEVALDRGAVIAGDRREEISEVELELVSGTPAHLFQLAAGI
HHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LEEAAARPMCLSKSERGYNLAAGKTAPVVKAKSPSLSTAMTVEDSFRAIARACLEHLMLN
HHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHC
ERCLLATEAGEAIHQMRVAMRRLRSAIKVFKTVTAGADLARVKDDLRWLLGHLGPARDAE
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHH
VFLSEIVAPVMAAHPDDAGLAALHAHWRKDREAKLAAAIAAVKSRRYAAMILNLGRWVET
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEC
GDWQAPTHGGPRRRLAEPIAAFAARRVSKAVRNLLREGGESLSRLSPEQRHAVRIRGKQV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHEEECCCHH
RYAGEFFASLVPRKTTKVFLAELSELQDVLGQLNDIAVAGPKLSGRGAETGSSRAAGLVA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCHHHHH
GWHQSRRSALLGAADKCWKRWRAMPVPWEEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDGREIELKLALAPEDLARIAQRPCLSAGRLAEPTSKRLSSIYFDTPDFILAAQGIAVRV
CCCCEEEEEEEECHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEECCEEEEE
RRTGSGFVQTVKTAGTSVSGLFDRDEWEVPVPSSELNAEQLRLTGLAAFADGELADRLSP
EECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHH
VFATEVERSLFRLGGDGWEAEVALDRGAVIAGDRREEISEVELELVSGTPAHLFQLAAGI
HHHHHHHHHHHHHCCCCCEEEEEECCCCEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHH
LEEAAARPMCLSKSERGYNLAAGKTAPVVKAKSPSLSTAMTVEDSFRAIARACLEHLMLN
HHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHC
ERCLLATEAGEAIHQMRVAMRRLRSAIKVFKTVTAGADLARVKDDLRWLLGHLGPARDAE
CCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCHHH
VFLSEIVAPVMAAHPDDAGLAALHAHWRKDREAKLAAAIAAVKSRRYAAMILNLGRWVET
HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEC
GDWQAPTHGGPRRRLAEPIAAFAARRVSKAVRNLLREGGESLSRLSPEQRHAVRIRGKQV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHEEECCCHH
RYAGEFFASLVPRKTTKVFLAELSELQDVLGQLNDIAVAGPKLSGRGAETGSSRAAGLVA
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCHHHHH
GWHQSRRSALLGAADKCWKRWRAMPVPWEEK
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]