| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311051
Identifier: 83311051
GI number: 83311051
Start: 2106197
End: 2106580
Strand: Reverse
Name: 83311051
Synonym: amb1952
Alternate gene names: NA
Gene position: 2106580-2106197 (Counterclockwise)
Preceding gene: 83311052
Following gene: 83311046
Centisome position: 42.41
GC content: 63.02
Gene sequence:
>384_bases ATGGCCACCTGGCTTGATGAGCAGTGGAAAAGCGGCGATCCGGCCATCGACGCCGAACACCAGAAACTTCACCAGATGAT CAGTTCCATGAGCGCGGTCATCCGCAACGACCCCGGCCTTGGCCTGGCGATCGAGGCGGTGGATGTTCTGACCGAGCGGA TCCGCATTCACTTCCGCATGGAGGAGGGTCTGGCCGCAAGACTCAACGCGGCCGCAGCCGAGCAGCTCAAGCTGGACCAC CAGCGTCTGCTGCGCCTGCTGACCCCGCTGTATGACGCTCTGCGACGGGGCAGCGCCGAGCAGGCCAAGTTGCTCCTGAG CGACTTCCTCAGCCAGTTGGACGCCCACGACCGCGAGATGGATATCCCGCTGTTTCAGAAGTAG
Upstream 100 bases:
>100_bases CTGGGCGGCACCGGAGTGCGTTACGGCTGACGCCACGCCCTGGAATTGTGCCCTCCCGCTTCCCATGTGAAGTCATGGCG GCGAAGTTTAGGGGACTGAA
Downstream 100 bases:
>100_bases GCCGGCGCCGATCGCCTCAGTGCTTATAATTCAGCCGGTCGTCGAACAGATGGCGGGGACCGAACAGGTTGACGCTGACC GCGCCCTTGTCCGTCAGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MATWLDEQWKSGDPAIDAEHQKLHQMISSMSAVIRNDPGLGLAIEAVDVLTERIRIHFRMEEGLAARLNAAAAEQLKLDH QRLLRLLTPLYDALRRGSAEQAKLLLSDFLSQLDAHDREMDIPLFQK
Sequences:
>Translated_127_residues MATWLDEQWKSGDPAIDAEHQKLHQMISSMSAVIRNDPGLGLAIEAVDVLTERIRIHFRMEEGLAARLNAAAAEQLKLDH QRLLRLLTPLYDALRRGSAEQAKLLLSDFLSQLDAHDREMDIPLFQK >Mature_126_residues ATWLDEQWKSGDPAIDAEHQKLHQMISSMSAVIRNDPGLGLAIEAVDVLTERIRIHFRMEEGLAARLNAAAAEQLKLDHQ RLLRLLTPLYDALRRGSAEQAKLLLSDFLSQLDAHDREMDIPLFQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14411; Mature: 14280
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATWLDEQWKSGDPAIDAEHQKLHQMISSMSAVIRNDPGLGLAIEAVDVLTERIRIHFRM CCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EEGLAARLNAAAAEQLKLDHQRLLRLLTPLYDALRRGSAEQAKLLLSDFLSQLDAHDREM HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC DIPLFQK CCCCCCC >Mature Secondary Structure ATWLDEQWKSGDPAIDAEHQKLHQMISSMSAVIRNDPGLGLAIEAVDVLTERIRIHFRM CCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EEGLAARLNAAAAEQLKLDHQRLLRLLTPLYDALRRGSAEQAKLLLSDFLSQLDAHDREM HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC DIPLFQK CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA