| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83311018
Identifier: 83311018
GI number: 83311018
Start: 2067664
End: 2068413
Strand: Reverse
Name: 83311018
Synonym: amb1919
Alternate gene names: NA
Gene position: 2068413-2067664 (Counterclockwise)
Preceding gene: 83311019
Following gene: 83311017
Centisome position: 41.64
GC content: 65.6
Gene sequence:
>750_bases ATGCGGCACTTCCGTTGCACCGCCTGTGGGAAGTGTTGCGTCGGCTGGCTGCCGCTGACTCTCAAGGATGCCCTGCTCCA TGCCGGCCGGTTTCCCCTCGCCGTGGTCTGGACGCCGGTTCGCCAGGCCGCCAAGGACTTTGCCGCCACCGAAAGGCTGG GCTTTACTTTCCGCACTCCCGACAAGAAGACGGTGGCGGTCAGGGTCTGCCCCACCGCCTACATCCCCCCCACCATGGCC TGTCCGGCGCTCACCGCTGATAATCTGTGCGCCATCCATGGGGCCAAGCCCCTGCGGTGCAAGACCATGCCGTTCTTTCC CTACCGGGACGAGGGGCATCAGGCGGACCTGCTGGTTCCCCGTCCCGGTTGGGACTGCGACGTCTCGCCATCGGCGCCTT CCGTCTATGACGGCAAGACCATTGTCGACCGAACCGATTTCGATGCCGAACGGGCCGAATTGTTGGCTCAGGCCCCCCTG ATCAGGCCCTATGCCCAACGGCTCATGGAGACGGCTCCCGCCATGGCAAGCGGCCTCGCCAAGGCCCTCCTCAAGCCGGG CGGGGGGCATGTCGCCGTAAGCTTTGCCTCGCTCCTGCGGCATTTGCCGAACGAGGATCGGAGCCGAATCGCCGCCCGGC AGATCGGGGCCCTGACGGAGGCATCCCACAGGCTCGGGACAGAATCCAGCTGGGCCGAATATCGCCGGAATTATCAGGAC TGGGCCTGGGAAATGGAGCGGCTGACCTGA
Upstream 100 bases:
>100_bases CCAAGTCTCCAAGGTGGGACGCAACGATCCTTGCCCTTGTGGCTCGGGGCTCAAATTCAAGAAGTGCTGCGGCGGTTGAG GTTGGAAGGGGAGGAATGCG
Downstream 100 bases:
>100_bases CGCCCAGACCGAAAGGTGTAGGCCATTATCTGATTTTAGTTATACTTCGGTTGATCTAATGACATTTGTCAAAAGATGCT AATGAACCGCCACGTTGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MRHFRCTACGKCCVGWLPLTLKDALLHAGRFPLAVVWTPVRQAAKDFAATERLGFTFRTPDKKTVAVRVCPTAYIPPTMA CPALTADNLCAIHGAKPLRCKTMPFFPYRDEGHQADLLVPRPGWDCDVSPSAPSVYDGKTIVDRTDFDAERAELLAQAPL IRPYAQRLMETAPAMASGLAKALLKPGGGHVAVSFASLLRHLPNEDRSRIAARQIGALTEASHRLGTESSWAEYRRNYQD WAWEMERLT
Sequences:
>Translated_249_residues MRHFRCTACGKCCVGWLPLTLKDALLHAGRFPLAVVWTPVRQAAKDFAATERLGFTFRTPDKKTVAVRVCPTAYIPPTMA CPALTADNLCAIHGAKPLRCKTMPFFPYRDEGHQADLLVPRPGWDCDVSPSAPSVYDGKTIVDRTDFDAERAELLAQAPL IRPYAQRLMETAPAMASGLAKALLKPGGGHVAVSFASLLRHLPNEDRSRIAARQIGALTEASHRLGTESSWAEYRRNYQD WAWEMERLT >Mature_249_residues MRHFRCTACGKCCVGWLPLTLKDALLHAGRFPLAVVWTPVRQAAKDFAATERLGFTFRTPDKKTVAVRVCPTAYIPPTMA CPALTADNLCAIHGAKPLRCKTMPFFPYRDEGHQADLLVPRPGWDCDVSPSAPSVYDGKTIVDRTDFDAERAELLAQAPL IRPYAQRLMETAPAMASGLAKALLKPGGGHVAVSFASLLRHLPNEDRSRIAARQIGALTEASHRLGTESSWAEYRRNYQD WAWEMERLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27590; Mature: 27590
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHFRCTACGKCCVGWLPLTLKDALLHAGRFPLAVVWTPVRQAAKDFAATERLGFTFRTP CCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEECC DKKTVAVRVCPTAYIPPTMACPALTADNLCAIHGAKPLRCKTMPFFPYRDEGHQADLLVP CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCEEEC RPGWDCDVSPSAPSVYDGKTIVDRTDFDAERAELLAQAPLIRPYAQRLMETAPAMASGLA CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KALLKPGGGHVAVSFASLLRHLPNEDRSRIAARQIGALTEASHRLGTESSWAEYRRNYQD HHHHCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHH WAWEMERLT HHHHHHHCC >Mature Secondary Structure MRHFRCTACGKCCVGWLPLTLKDALLHAGRFPLAVVWTPVRQAAKDFAATERLGFTFRTP CCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEECC DKKTVAVRVCPTAYIPPTMACPALTADNLCAIHGAKPLRCKTMPFFPYRDEGHQADLLVP CCCEEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCCCCCCCCEEEC RPGWDCDVSPSAPSVYDGKTIVDRTDFDAERAELLAQAPLIRPYAQRLMETAPAMASGLA CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KALLKPGGGHVAVSFASLLRHLPNEDRSRIAARQIGALTEASHRLGTESSWAEYRRNYQD HHHHCCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHHH WAWEMERLT HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA