| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310961
Identifier: 83310961
GI number: 83310961
Start: 2002830
End: 2003954
Strand: Reverse
Name: 83310961
Synonym: amb1862
Alternate gene names: NA
Gene position: 2003954-2002830 (Counterclockwise)
Preceding gene: 83310966
Following gene: 83310960
Centisome position: 40.34
GC content: 63.47
Gene sequence:
>1125_bases ATGACCCAGAAAAGTAGCGTCGATCAGAACACCATCCGCCGCCGCGGCGTCGGCCTGCGCGCCCTGGACCGGGATCGGGC CTTTCCCGGCTATACGCTGTTCGCCCCCATCACCGGCAGCGGGCAGGTCTATCTGGTCGATCTGGAGGGCAATGTGGTCC ACCAGTGGAACCTGCCCTATCCGCCCGGCTCGTACGGCTATCTGCTGCCCAACGGCAATCTGTTCTACAGCGGCAAGACC ACCGAGAACCTGGACGGGGTTCCCTGGTGGTTCAAGGGCGGCATCGTCCTGGAAGCCGATCCCTCGGGCAAGATCGTCTG GGAATATCGCCACCCCGACCACCACCACGACGCCAGGCGGCTGGCCAACGGCAACGTCGTCATCCTGGCCACCGAACGCA TTCCGGCGGAGTTGGCCGCCAAGGTGCGGGGCGGCCTGCCCGGCACCGAGCTGCCTGACGGCGGCATCCTGGCCGATGTC ATCCACGAGGTCACCTCCGAGGGCAAGATCATCTGGACCTGGCACGCCTTCGAGCATCTCGATCCCGAGACCGACATCAT CACCAGCCACGACAAGCGCGAGGAATGGAGCCACGCCAACACGGTGGGCGAGTTGGCCGACGGCAATTTCATCCTCAGCT TCCGCAACCTGTCGACCGTGGTGATCGTCGAGCGCAGGACCGGCAAGATTATCTGGCGCCTGGGGCGCGAGACCCTGTCG CACCAGCACTACCCCCACGAATTGCCCAACGGCAATATCCTGATCTTCGACAACGGCACCTACCGCGAGAACGCGGCGCT GAACTTCTCGCGGGTGATCGAGGTGGACAAGAAGACCAAGGAGATCGTCTGGCAGTACACCGACACGCCGCTGCACAATT TCTTCAGCCCCTACATCTCCGGCGCCCAGCGCCTGCCCAACGGCAATACGCTGATCACCGAGGGCAATTACGGCCGCCTG TTCGAGGTCACCCCCGACAAGGAGATCGTCTGGGAATACGTCAATCCGCATTTCGCCCCCCAGCAGATCACCCGCGACCA ATCCCCGGCGGTGCAGGGCGAGCAGAACTCGGTGTTCCGCTCGTTCCGCTATTCCGCCGAGCAGATTCCGTGGCTGAAAC GTTAA
Upstream 100 bases:
>100_bases AACACGTACAACGTACACAAACAACTCTTCAATCACTGTTAATTGAGCACAACGCCCAACGGCACACTCATCAATCATCA CCCCAAACCCGAGGATTTCC
Downstream 100 bases:
>100_bases GCGACCCTGGGTGCGGGGCGGCTCCGGCCGCCCCGCATACTCTTGCGGAGTCCCCCCCATGCCCGGATCTTTGATCCGCC GCTTCATCCAGGCGGCGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 374; Mature: 373
Protein sequence:
>374_residues MTQKSSVDQNTIRRRGVGLRALDRDRAFPGYTLFAPITGSGQVYLVDLEGNVVHQWNLPYPPGSYGYLLPNGNLFYSGKT TENLDGVPWWFKGGIVLEADPSGKIVWEYRHPDHHHDARRLANGNVVILATERIPAELAAKVRGGLPGTELPDGGILADV IHEVTSEGKIIWTWHAFEHLDPETDIITSHDKREEWSHANTVGELADGNFILSFRNLSTVVIVERRTGKIIWRLGRETLS HQHYPHELPNGNILIFDNGTYRENAALNFSRVIEVDKKTKEIVWQYTDTPLHNFFSPYISGAQRLPNGNTLITEGNYGRL FEVTPDKEIVWEYVNPHFAPQQITRDQSPAVQGEQNSVFRSFRYSAEQIPWLKR
Sequences:
>Translated_374_residues MTQKSSVDQNTIRRRGVGLRALDRDRAFPGYTLFAPITGSGQVYLVDLEGNVVHQWNLPYPPGSYGYLLPNGNLFYSGKT TENLDGVPWWFKGGIVLEADPSGKIVWEYRHPDHHHDARRLANGNVVILATERIPAELAAKVRGGLPGTELPDGGILADV IHEVTSEGKIIWTWHAFEHLDPETDIITSHDKREEWSHANTVGELADGNFILSFRNLSTVVIVERRTGKIIWRLGRETLS HQHYPHELPNGNILIFDNGTYRENAALNFSRVIEVDKKTKEIVWQYTDTPLHNFFSPYISGAQRLPNGNTLITEGNYGRL FEVTPDKEIVWEYVNPHFAPQQITRDQSPAVQGEQNSVFRSFRYSAEQIPWLKR >Mature_373_residues TQKSSVDQNTIRRRGVGLRALDRDRAFPGYTLFAPITGSGQVYLVDLEGNVVHQWNLPYPPGSYGYLLPNGNLFYSGKTT ENLDGVPWWFKGGIVLEADPSGKIVWEYRHPDHHHDARRLANGNVVILATERIPAELAAKVRGGLPGTELPDGGILADVI HEVTSEGKIIWTWHAFEHLDPETDIITSHDKREEWSHANTVGELADGNFILSFRNLSTVVIVERRTGKIIWRLGRETLSH QHYPHELPNGNILIFDNGTYRENAALNFSRVIEVDKKTKEIVWQYTDTPLHNFFSPYISGAQRLPNGNTLITEGNYGRLF EVTPDKEIVWEYVNPHFAPQQITRDQSPAVQGEQNSVFRSFRYSAEQIPWLKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42514; Mature: 42383
Theoretical pI: Translated: 6.57; Mature: 6.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQKSSVDQNTIRRRGVGLRALDRDRAFPGYTLFAPITGSGQVYLVDLEGNVVHQWNLPY CCCCCCCCHHHHHHCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCEEEEECCCC PPGSYGYLLPNGNLFYSGKTTENLDGVPWWFKGGIVLEADPSGKIVWEYRHPDHHHDARR CCCCCEEEECCCCEEECCCCCCCCCCCCEEEECCEEEEECCCCCEEEEECCCCCCCHHHH LANGNVVILATERIPAELAAKVRGGLPGTELPDGGILADVIHEVTSEGKIIWTWHAFEHL HCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHC DPETDIITSHDKREEWSHANTVGELADGNFILSFRNLSTVVIVERRTGKIIWRLGRETLS CCCCCEECCCCCHHHHHHHCCHHHHCCCCEEEEEECCEEEEEEEECCCEEEEECCHHHHC HQHYPHELPNGNILIFDNGTYRENAALNFSRVIEVDKKTKEIVWQYTDTPLHNFFSPYIS CCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEEECCCCEEEEEEECCCCHHHHHHHHHH GAQRLPNGNTLITEGNYGRLFEVTPDKEIVWEYVNPHFAPQQITRDQSPAVQGEQNSVFR HHHHCCCCCEEEEECCCCEEEEECCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHH SFRYSAEQIPWLKR HHHCCHHCCCCCCC >Mature Secondary Structure TQKSSVDQNTIRRRGVGLRALDRDRAFPGYTLFAPITGSGQVYLVDLEGNVVHQWNLPY CCCCCCCHHHHHHCCCCCEEECCCCCCCCEEEEEEECCCCEEEEEEECCCEEEEECCCC PPGSYGYLLPNGNLFYSGKTTENLDGVPWWFKGGIVLEADPSGKIVWEYRHPDHHHDARR CCCCCEEEECCCCEEECCCCCCCCCCCCEEEECCEEEEECCCCCEEEEECCCCCCCHHHH LANGNVVILATERIPAELAAKVRGGLPGTELPDGGILADVIHEVTSEGKIIWTWHAFEHL HCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEHHHHC DPETDIITSHDKREEWSHANTVGELADGNFILSFRNLSTVVIVERRTGKIIWRLGRETLS CCCCCEECCCCCHHHHHHHCCHHHHCCCCEEEEEECCEEEEEEEECCCEEEEECCHHHHC HQHYPHELPNGNILIFDNGTYRENAALNFSRVIEVDKKTKEIVWQYTDTPLHNFFSPYIS CCCCCCCCCCCCEEEECCCCCCCCCCCCHHHEEEECCCCEEEEEEECCCCHHHHHHHHHH GAQRLPNGNTLITEGNYGRLFEVTPDKEIVWEYVNPHFAPQQITRDQSPAVQGEQNSVFR HHHHCCCCCEEEEECCCCEEEEECCCHHHHHHHCCCCCCHHHHCCCCCCCCCCCHHHHHH SFRYSAEQIPWLKR HHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA