| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310955
Identifier: 83310955
GI number: 83310955
Start: 1997392
End: 1998546
Strand: Reverse
Name: 83310955
Synonym: amb1856
Alternate gene names: NA
Gene position: 1998546-1997392 (Counterclockwise)
Preceding gene: 83310956
Following gene: 83310954
Centisome position: 40.24
GC content: 68.14
Gene sequence:
>1155_bases ATGCCCGTCACCCTGTCCCAGCGTCCCATTTTCGTCATCGGCCCCGAGCGCTCCGGCACCACCCTGGTGATGGCCATGCT CGGCAATCATCCCGACATCGCCGTGCCCGAGGTGGCGTGGTTCTATCCCCGTTTCCGTCCCTATGTTCACACCCATGGCG ACCTGTCCGAGGGCACCAATTTCCGCGCCCTGGTCGAGGAGATGATCTTCGGCCTGAAGACGCCATTCTTCGACCTCCCG GTCAATCCGCGCACCATCGTCGACGAACTGGTGGCCGAAGCCCCTGAGCGCAGCTTCGCCGGCGCCTATGCCGCCATCCT GGGGCGCTACGCCCGGCATGCGGGCAAGCCGCGCTGGGGCGAGAAGACTCCCTACAACCTGTTCTTCGTGGACCAGATCC TGGAGGACTTCCCCAACGCCCAATTCGTGGTCATCACCCGGGACGGCCGCGACGCCAGCGCCGATTACCTGGAATCCTCG TTCGGCCCCACCAACATCCTGGCCGCCGCCGAGATCTGGGCGCTGAACCAGCGGACCATCGCGGCGGCACGGGCCAAGGT TGCCCCCGGGCAGTGGTTCGACGTGCGCTACGAGACCCTGGTGCGCCAGCCCGAGGCCGAGTTGAAGCGCATCGCCGCCT TCCTGGGGGTGGAGTACAGCCCGGCCTTCCTGGAGTTCCACACCACCTCCATCGCCCAGGCGCGCGGCGCCCAGCGCGAC CATGCGCCGCTGGGGCACCCGGTCAGCGACCGCTATATCGGCATCCACAAGACCCTGCTCAGCCTGCGCGACCAGCGGGT CTTCGCCGCCATCGCCGGCAGGGAACTGGCCGAGGCCGGCTATGAACTGGACGTGGAGCCTCAGCCCCCCACCGAGGCCG AGGCGCGGCGCTGGCGGGATTACGATGCCCGTATCCGTGCCGCCACCCTGGACAGCGAGGACGGCCATGTGGTCTACGAA AGCTACAACGACTGGCTGGCCGACCAGCGCGAGGCCCGGCGCCGCAAAGGCCTGTGGACCGATCACCCCAGCCCCACCCC CTTCCCCATCGGCACCCCCCACGAGGAACTGGTCCAGGGCTTCCGGGCCTGGCGCCACTGGAAGGAGGCCTTCGGTGTCA AGCGCCGCTATACGTCGAGCCGCCCGGTTCTCTAG
Upstream 100 bases:
>100_bases GCTTCCGCGAGCAGGGCATGGTGGACGTCACCCCCACCCGCATCCTCATCCGCGACGAAGAGCGCCTGCGCCGCTTCGCC GGCTAACCAAGAGAGTCCCC
Downstream 100 bases:
>100_bases CGCCCTGTCGGGCCTGGGGCTGCTGGTCGCCTTCTGGGCCCTGGCGGCGGCGGGACTGGACAATCCGGTCCTGCTGCCCT CGCCCGCCGAGGTGGCCGGG
Product: putative protein-tyrosine sulfotransferase
Products: NA
Alternate protein names: Sulfotransferase Domain Superfamily; Sulfotransferase Domain-Containing Protein; Protein-Tyrosine Sulfotransferase; Sulfotransferase Domain Family; Sulfotransferase Domain Protein
Number of amino acids: Translated: 384; Mature: 383
Protein sequence:
>384_residues MPVTLSQRPIFVIGPERSGTTLVMAMLGNHPDIAVPEVAWFYPRFRPYVHTHGDLSEGTNFRALVEEMIFGLKTPFFDLP VNPRTIVDELVAEAPERSFAGAYAAILGRYARHAGKPRWGEKTPYNLFFVDQILEDFPNAQFVVITRDGRDASADYLESS FGPTNILAAAEIWALNQRTIAAARAKVAPGQWFDVRYETLVRQPEAELKRIAAFLGVEYSPAFLEFHTTSIAQARGAQRD HAPLGHPVSDRYIGIHKTLLSLRDQRVFAAIAGRELAEAGYELDVEPQPPTEAEARRWRDYDARIRAATLDSEDGHVVYE SYNDWLADQREARRRKGLWTDHPSPTPFPIGTPHEELVQGFRAWRHWKEAFGVKRRYTSSRPVL
Sequences:
>Translated_384_residues MPVTLSQRPIFVIGPERSGTTLVMAMLGNHPDIAVPEVAWFYPRFRPYVHTHGDLSEGTNFRALVEEMIFGLKTPFFDLP VNPRTIVDELVAEAPERSFAGAYAAILGRYARHAGKPRWGEKTPYNLFFVDQILEDFPNAQFVVITRDGRDASADYLESS FGPTNILAAAEIWALNQRTIAAARAKVAPGQWFDVRYETLVRQPEAELKRIAAFLGVEYSPAFLEFHTTSIAQARGAQRD HAPLGHPVSDRYIGIHKTLLSLRDQRVFAAIAGRELAEAGYELDVEPQPPTEAEARRWRDYDARIRAATLDSEDGHVVYE SYNDWLADQREARRRKGLWTDHPSPTPFPIGTPHEELVQGFRAWRHWKEAFGVKRRYTSSRPVL >Mature_383_residues PVTLSQRPIFVIGPERSGTTLVMAMLGNHPDIAVPEVAWFYPRFRPYVHTHGDLSEGTNFRALVEEMIFGLKTPFFDLPV NPRTIVDELVAEAPERSFAGAYAAILGRYARHAGKPRWGEKTPYNLFFVDQILEDFPNAQFVVITRDGRDASADYLESSF GPTNILAAAEIWALNQRTIAAARAKVAPGQWFDVRYETLVRQPEAELKRIAAFLGVEYSPAFLEFHTTSIAQARGAQRDH APLGHPVSDRYIGIHKTLLSLRDQRVFAAIAGRELAEAGYELDVEPQPPTEAEARRWRDYDARIRAATLDSEDGHVVYES YNDWLADQREARRRKGLWTDHPSPTPFPIGTPHEELVQGFRAWRHWKEAFGVKRRYTSSRPVL
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43553; Mature: 43421
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVTLSQRPIFVIGPERSGTTLVMAMLGNHPDIAVPEVAWFYPRFRPYVHTHGDLSEGTN CCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCC FRALVEEMIFGLKTPFFDLPVNPRTIVDELVAEAPERSFAGAYAAILGRYARHAGKPRWG HHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC EKTPYNLFFVDQILEDFPNAQFVVITRDGRDASADYLESSFGPTNILAAAEIWALNQRTI CCCCCEEEEHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHH AAARAKVAPGQWFDVRYETLVRQPEAELKRIAAFLGVEYSPAFLEFHTTSIAQARGAQRD HHHHHHCCCCCEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHEEEHHHHHHHHCCCCCC HAPLGHPVSDRYIGIHKTLLSLRDQRVFAAIAGRELAEAGYELDVEPQPPTEAEARRWRD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCC YDARIRAATLDSEDGHVVYESYNDWLADQREARRRKGLWTDHPSPTPFPIGTPHEELVQG CCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH FRAWRHWKEAFGVKRRYTSSRPVL HHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PVTLSQRPIFVIGPERSGTTLVMAMLGNHPDIAVPEVAWFYPRFRPYVHTHGDLSEGTN CCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCEECCCCCCCCCC FRALVEEMIFGLKTPFFDLPVNPRTIVDELVAEAPERSFAGAYAAILGRYARHAGKPRWG HHHHHHHHHHHHCCCCEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC EKTPYNLFFVDQILEDFPNAQFVVITRDGRDASADYLESSFGPTNILAAAEIWALNQRTI CCCCCEEEEHHHHHHHCCCCEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCCCHHH AAARAKVAPGQWFDVRYETLVRQPEAELKRIAAFLGVEYSPAFLEFHTTSIAQARGAQRD HHHHHHCCCCCEEHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHEEEHHHHHHHHCCCCCC HAPLGHPVSDRYIGIHKTLLSLRDQRVFAAIAGRELAEAGYELDVEPQPPTEAEARRWRD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHCC YDARIRAATLDSEDGHVVYESYNDWLADQREARRRKGLWTDHPSPTPFPIGTPHEELVQG CCCEEEEEEECCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHH FRAWRHWKEAFGVKRRYTSSRPVL HHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA