| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is ssuA [H]
Identifier: 83310953
GI number: 83310953
Start: 1995743
End: 1996660
Strand: Reverse
Name: ssuA [H]
Synonym: amb1854
Alternate gene names: 83310953
Gene position: 1996660-1995743 (Counterclockwise)
Preceding gene: 83310954
Following gene: 83310951
Centisome position: 40.2
GC content: 67.97
Gene sequence:
>918_bases ATGACCCGATTGCTGGCCCTGGCGGTCACTCTGTTCCTCGCCCTCCCGGCCGCCGCCCAGGACAAGCTGCGGCTGGGCTA TCCCGCCGGAATGAACGGCCAGATCGTCACCATCCTGGAAAAGGCCAATCTCGCCGCCGCCCGCGGCCAGGAGGTGGAGT ACACCTTCTTTCAGAACGGCCCGCCCATGATGGAGGCCTTCGCCGCCGGCCAGTTGGACGTCGCCGTCACCAGCCTGATG CCGCTGGCCACCTTCGCCGCCCGCCTGCCGGGCCAGGCGGTGATCGTCTCGGGCCTCGGCCATTCCAGCTACGCCCTCCT GGTGAAGGCGGCAAGCCCGGTGGCCAAACTGGCGGACCTCAAGGGCAAACGGATCGCCGTATCGTTCGGGTCGGACAGCC ATCTCGACCTGCTGGCCTCGCTGGCCGAGGCCGGACTCGACCCCAAGACCGACGTGGAGCTTCTCAACATCCAGCCCGCC GAACTGCCGGTGGCGTTGGAGAAGGACCATGCCGACGCCATTGTCATCCGCCAGCCCCAGGTGCTGCGGCTACAGCAGAG CCAAGGCGCCCGGCTGATCAAGAGCTGGCCTCACACCTACGTGGTCCTGGCCCGCGCCGCCTACTTGGAGAAGCACCCCG ACGCCATCCGTTCGCTGACCGGCGCCCTGGCGGATTCGGTGGCCTATATCCGCGCCCGCCCGGAACAGGCCGCCGAGTGG TTCGGCGAGAAGCTGCGCGTCGATGCCGCCACGGTCAGGCAGGTGTCCGCCGAGAACCCGCTGATCGCCTCGCCCCACTA TTACCAGTTGGGCGTCACTCCGGATTTGCGCGCCGTCACCGCCCGCTGGATGACCGAGGCGCACAAATGGGGGCTGATCA AAAGCCCGGTGGATGCCGGGCGGCTGTTCCTGCCATAG
Upstream 100 bases:
>100_bases CTGGTGGGCATGGTCACCATCGGCACGCTGGGCGCCCTGATGACCTGGGCCTTCACCCTGGCCGAACGCCGCCTTCTCGT CCCCTGGCAGGAGAATTGAC
Downstream 100 bases:
>100_bases GCGATGTGGGGCGGTGCTGCAGGCGCTCTGCCGGTCGGGCGTAGAGATAGCCCTGCAGCATGTCCACCCCGGCGTCCACA GCCAGGGAATGCTGGGACAC
Product: ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MTRLLALAVTLFLALPAAAQDKLRLGYPAGMNGQIVTILEKANLAAARGQEVEYTFFQNGPPMMEAFAAGQLDVAVTSLM PLATFAARLPGQAVIVSGLGHSSYALLVKAASPVAKLADLKGKRIAVSFGSDSHLDLLASLAEAGLDPKTDVELLNIQPA ELPVALEKDHADAIVIRQPQVLRLQQSQGARLIKSWPHTYVVLARAAYLEKHPDAIRSLTGALADSVAYIRARPEQAAEW FGEKLRVDAATVRQVSAENPLIASPHYYQLGVTPDLRAVTARWMTEAHKWGLIKSPVDAGRLFLP
Sequences:
>Translated_305_residues MTRLLALAVTLFLALPAAAQDKLRLGYPAGMNGQIVTILEKANLAAARGQEVEYTFFQNGPPMMEAFAAGQLDVAVTSLM PLATFAARLPGQAVIVSGLGHSSYALLVKAASPVAKLADLKGKRIAVSFGSDSHLDLLASLAEAGLDPKTDVELLNIQPA ELPVALEKDHADAIVIRQPQVLRLQQSQGARLIKSWPHTYVVLARAAYLEKHPDAIRSLTGALADSVAYIRARPEQAAEW FGEKLRVDAATVRQVSAENPLIASPHYYQLGVTPDLRAVTARWMTEAHKWGLIKSPVDAGRLFLP >Mature_304_residues TRLLALAVTLFLALPAAAQDKLRLGYPAGMNGQIVTILEKANLAAARGQEVEYTFFQNGPPMMEAFAAGQLDVAVTSLMP LATFAARLPGQAVIVSGLGHSSYALLVKAASPVAKLADLKGKRIAVSFGSDSHLDLLASLAEAGLDPKTDVELLNIQPAE LPVALEKDHADAIVIRQPQVLRLQQSQGARLIKSWPHTYVVLARAAYLEKHPDAIRSLTGALADSVAYIRARPEQAAEWF GEKLRVDAATVRQVSAENPLIASPHYYQLGVTPDLRAVTARWMTEAHKWGLIKSPVDAGRLFLP
Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Putative binding protein [H]
COG id: COG0715
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein ssuA/tauA family [H]
Homologues:
Organism=Escherichia coli, GI87081727, Length=199, Percent_Identity=28.643216080402, Blast_Score=75, Evalue=4e-15, Organism=Escherichia coli, GI87081803, Length=243, Percent_Identity=27.5720164609054, Blast_Score=73, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010067 - InterPro: IPR015168 - InterPro: IPR001638 [H]
Pfam domain/function: PF09084 NMT1 [H]
EC number: NA
Molecular weight: Translated: 32821; Mature: 32690
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLLALAVTLFLALPAAAQDKLRLGYPAGMNGQIVTILEKANLAAARGQEVEYTFFQNG CHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHCCCCEEEEEECCC PPMMEAFAAGQLDVAVTSLMPLATFAARLPGQAVIVSGLGHSSYALLVKAASPVAKLADL CHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCHHHHHHHC KGKRIAVSFGSDSHLDLLASLAEAGLDPKTDVELLNIQPAELPVALEKDHADAIVIRQPQ CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCEEEEECCH VLRLQQSQGARLIKSWPHTYVVLARAAYLEKHPDAIRSLTGALADSVAYIRARPEQAAEW HEEEECCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH FGEKLRVDAATVRQVSAENPLIASPHYYQLGVTPDLRAVTARWMTEAHKWGLIKSPVDAG HHHHEECCHHHHHHHCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCC RLFLP CCCCC >Mature Secondary Structure TRLLALAVTLFLALPAAAQDKLRLGYPAGMNGQIVTILEKANLAAARGQEVEYTFFQNG HHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCEEEEEECCCHHHHCCCCEEEEEECCC PPMMEAFAAGQLDVAVTSLMPLATFAARLPGQAVIVSGLGHSSYALLVKAASPVAKLADL CHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCHHHHHHHC KGKRIAVSFGSDSHLDLLASLAEAGLDPKTDVELLNIQPAELPVALEKDHADAIVIRQPQ CCCEEEEEECCCCHHHHHHHHHHCCCCCCCCEEEEECCCCCCCEEEECCCCCEEEEECCH VLRLQQSQGARLIKSWPHTYVVLARAAYLEKHPDAIRSLTGALADSVAYIRARPEQAAEW HEEEECCCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHH FGEKLRVDAATVRQVSAENPLIASPHYYQLGVTPDLRAVTARWMTEAHKWGLIKSPVDAG HHHHEECCHHHHHHHCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCC RLFLP CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8011666; 9782504; 9384377 [H]