| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310936
Identifier: 83310936
GI number: 83310936
Start: 1975096
End: 1975659
Strand: Reverse
Name: 83310936
Synonym: amb1837
Alternate gene names: NA
Gene position: 1975659-1975096 (Counterclockwise)
Preceding gene: 83310938
Following gene: 83310923
Centisome position: 39.77
GC content: 69.33
Gene sequence:
>564_bases ATGGATTGCCGGGGCCGCTCCATCACGTCACGTAACATTTCATCGGCCTCCTCCGTCCAATGGGCATTACGTCCAGTACA GGAGAACGCCATGCCCATGACGATGTTGGAAAAGGAACTGGTGGCGCTTGCCATCTCGGTGGCGGCGGGGTGCCGTCCCT GCGTCACCCATCATCTGGTGGAGGTCCGCAAGGCCGGGGCCGACGACGCGGCCATCGAACAGGCGGTAGCCGGCGCCGTC CGGGTGCGCAAGACCGCCACCGAAGGGATGCGCCGCCACGCCCTCGGCCTCGACCCGGTGACGGATGGCTGCGGCTGTGG CGCCGCCGATCCCCTGGCCGAGCTGATCGCTCTGGGAGCGGCGCTGGCGGTCAACTGCACCGCCGGAATCGACCGGCATC TGGCGGCGGCCCGCTCCCTCGGCATTCCCCAGGATCGCCTGGACGAGGTCCTTGGCCTCGCCTCCATGATCCGCTCCAGG GCCATCAGCCACGCCGAGGCCCGGTTGGGCGCCACCGGCCAGGGCAATTGGGGCGAAGCCCCGAAAGCGGCCCGCTGCTG CTGA
Upstream 100 bases:
>100_bases TCGGCCAGATTGTCATTGGTCTTCATATATGCCCCCTTGGTCTTCCCCGAGTGGTTCGGGATCAGGGGCGATCCTACCCC AGGGTAATCCCGGCGAGAAC
Downstream 100 bases:
>100_bases TCCCGGGCGAAAGCAAAAGGGGCGGCATCTTCGGATGCCGCCCCTTCTTTATTGGCAGAACACCAGGCCCGCCAGCAGCA GATCGGCCTGGGGCTGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MDCRGRSITSRNISSASSVQWALRPVQENAMPMTMLEKELVALAISVAAGCRPCVTHHLVEVRKAGADDAAIEQAVAGAV RVRKTATEGMRRHALGLDPVTDGCGCGAADPLAELIALGAALAVNCTAGIDRHLAAARSLGIPQDRLDEVLGLASMIRSR AISHAEARLGATGQGNWGEAPKAARCC
Sequences:
>Translated_187_residues MDCRGRSITSRNISSASSVQWALRPVQENAMPMTMLEKELVALAISVAAGCRPCVTHHLVEVRKAGADDAAIEQAVAGAV RVRKTATEGMRRHALGLDPVTDGCGCGAADPLAELIALGAALAVNCTAGIDRHLAAARSLGIPQDRLDEVLGLASMIRSR AISHAEARLGATGQGNWGEAPKAARCC >Mature_187_residues MDCRGRSITSRNISSASSVQWALRPVQENAMPMTMLEKELVALAISVAAGCRPCVTHHLVEVRKAGADDAAIEQAVAGAV RVRKTATEGMRRHALGLDPVTDGCGCGAADPLAELIALGAALAVNCTAGIDRHLAAARSLGIPQDRLDEVLGLASMIRSR AISHAEARLGATGQGNWGEAPKAARCC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19416; Mature: 19416
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDCRGRSITSRNISSASSVQWALRPVQENAMPMTMLEKELVALAISVAAGCRPCVTHHLV CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH EVRKAGADDAAIEQAVAGAVRVRKTATEGMRRHALGLDPVTDGCGCGAADPLAELIALGA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH ALAVNCTAGIDRHLAAARSLGIPQDRLDEVLGLASMIRSRAISHAEARLGATGQGNWGEA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PKAARCC CCCCCCC >Mature Secondary Structure MDCRGRSITSRNISSASSVQWALRPVQENAMPMTMLEKELVALAISVAAGCRPCVTHHLV CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH EVRKAGADDAAIEQAVAGAVRVRKTATEGMRRHALGLDPVTDGCGCGAADPLAELIALGA HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH ALAVNCTAGIDRHLAAARSLGIPQDRLDEVLGLASMIRSRAISHAEARLGATGQGNWGEA HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC PKAARCC CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA