| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310898
Identifier: 83310898
GI number: 83310898
Start: 1937430
End: 1938800
Strand: Reverse
Name: 83310898
Synonym: amb1799
Alternate gene names: NA
Gene position: 1938800-1937430 (Counterclockwise)
Preceding gene: 83310900
Following gene: 83310897
Centisome position: 39.03
GC content: 67.54
Gene sequence:
>1371_bases ATGGCCGCCCGGCCTTCCTGGTTGAGCTGCGTGATCATCGCCGGACTGGCCTCGGGCTGCGTCACCACGCGCGAGCAGGA GATCAGCCCGGCGCCGTCCGTGGTCCAAGCCTATCTCGACGACAAGCCCACCGAGCTGCGCCGCCATTTCTTCATCGCCC AGGCTCAGGGCGACCGCAACCGGGTGCTCAACGACATGCGCCTGGGCCTGGCCAGCTTCGGCCTGGGCCGCGACCAATTG GCCGCCCAATTGTTCGACGACGCGCTGGGCGGCATCGAGGCCATCTACGCCGACAACGACGACGCCCGCAGGGCGCGCGG CCTGTGGGTCAAGGAAGGCACCAAGGACTTCAAGGGCGAGCCCTACGAGCGCGTCATGGCCTATTACTATCGCGGTCTGC TCTACATGAAGGCCGGCGATTACGAAAATGCCCGGGCCAGCTTCAAGGGCGGCCTGCTGCAGGATTCCTTCGCCGAGGAA GAACAGTTCCGCGCCGATTTCGCCCTGATGCCCTTCCTGCAGGGCTGGGCCGCCCATTGCTCGGGGAACGATTCCCTGGC CGCCGAGGACTTCAAGGAATTCCGCGCCATCAACAAGGACGCGCCGCTGCCCCGCGACAAGGACAATATCCTGGTCCTGG TGGAGAGCGGCGCCGCTCCGGTGAAGACCTCCGACGGGCCGCGCCTCAAGATCAAGCGCAGCGGCAGCACCGAGACCGCC CGCATTTCCTGGGCCGATCCAGAACACCCCAAGGATCACCCCGGCGCCAATGCCATCTTGCTGGAAGACATCTTCCGCCA GGCCTCCACCCGGGGCGGACGGCCCTTCGACTCCATCCTGGAGGGCAAGGCCGACTACAAGGACACCGCCGACACGGTGG GCAATGTCGCCCTGATCGGCGCGGTGCTGGCCGCCAAGGTCGCCGTGGACAACGGCCCGCGCCGGCACGAGACCAAGGAG CAGCGCAAGAACCGCGAGCAGGCCCAGGCCGGCGCCGCCATGGTGGGGGCCGGACTGGCGGTGATCGGAGGCCTGTCCAA GCTGTTCGCCAGCTCCATCGAAGCCCAGGCCGATACCCGCTATTGGGACAACCTCTCCGATCGGGTCCAGGGACTGACCC TGACCCTGCCGGACAAGCTGACCGCGCTGCAAGTGGAGTTCCGCTCTGCCGGCGGCACCACGCTGGAAACGGTGGAGGTT CCCATCCGGCGGGCCGGCAAATGCGGTCTGGTCTGGGCGCATCACGGCCCGACCATCCCGCGCAATCCCCGCGCCCCCAA CAGCGTCCCCCCCGATGTGATGGCTTCGCCCATCGTCATCCCCGCCCCGGAGGCCAAGATCCCCGTGGCGGAGGCCAAAT CCAAGGAGTGA
Upstream 100 bases:
>100_bases GAGATGGTCGACCTGGAAACCTCGGAAATCGTCTGGAGCGGCATCTACGAATTCGCCAAGGCCGCCCAGGACGACATCAT CTATCGCTAGGATCACCCCC
Downstream 100 bases:
>100_bases CTTCCATGAAGCGCCTGTTCGTTCCCGCTTTCGGCCTTCTGCTGCTCGGCGGCTGCGCCTCCCTGGACCCGGCCCCCCAT TGCGACATGTCCCGTGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MAARPSWLSCVIIAGLASGCVTTREQEISPAPSVVQAYLDDKPTELRRHFFIAQAQGDRNRVLNDMRLGLASFGLGRDQL AAQLFDDALGGIEAIYADNDDARRARGLWVKEGTKDFKGEPYERVMAYYYRGLLYMKAGDYENARASFKGGLLQDSFAEE EQFRADFALMPFLQGWAAHCSGNDSLAAEDFKEFRAINKDAPLPRDKDNILVLVESGAAPVKTSDGPRLKIKRSGSTETA RISWADPEHPKDHPGANAILLEDIFRQASTRGGRPFDSILEGKADYKDTADTVGNVALIGAVLAAKVAVDNGPRRHETKE QRKNREQAQAGAAMVGAGLAVIGGLSKLFASSIEAQADTRYWDNLSDRVQGLTLTLPDKLTALQVEFRSAGGTTLETVEV PIRRAGKCGLVWAHHGPTIPRNPRAPNSVPPDVMASPIVIPAPEAKIPVAEAKSKE
Sequences:
>Translated_456_residues MAARPSWLSCVIIAGLASGCVTTREQEISPAPSVVQAYLDDKPTELRRHFFIAQAQGDRNRVLNDMRLGLASFGLGRDQL AAQLFDDALGGIEAIYADNDDARRARGLWVKEGTKDFKGEPYERVMAYYYRGLLYMKAGDYENARASFKGGLLQDSFAEE EQFRADFALMPFLQGWAAHCSGNDSLAAEDFKEFRAINKDAPLPRDKDNILVLVESGAAPVKTSDGPRLKIKRSGSTETA RISWADPEHPKDHPGANAILLEDIFRQASTRGGRPFDSILEGKADYKDTADTVGNVALIGAVLAAKVAVDNGPRRHETKE QRKNREQAQAGAAMVGAGLAVIGGLSKLFASSIEAQADTRYWDNLSDRVQGLTLTLPDKLTALQVEFRSAGGTTLETVEV PIRRAGKCGLVWAHHGPTIPRNPRAPNSVPPDVMASPIVIPAPEAKIPVAEAKSKE >Mature_455_residues AARPSWLSCVIIAGLASGCVTTREQEISPAPSVVQAYLDDKPTELRRHFFIAQAQGDRNRVLNDMRLGLASFGLGRDQLA AQLFDDALGGIEAIYADNDDARRARGLWVKEGTKDFKGEPYERVMAYYYRGLLYMKAGDYENARASFKGGLLQDSFAEEE QFRADFALMPFLQGWAAHCSGNDSLAAEDFKEFRAINKDAPLPRDKDNILVLVESGAAPVKTSDGPRLKIKRSGSTETAR ISWADPEHPKDHPGANAILLEDIFRQASTRGGRPFDSILEGKADYKDTADTVGNVALIGAVLAAKVAVDNGPRRHETKEQ RKNREQAQAGAAMVGAGLAVIGGLSKLFASSIEAQADTRYWDNLSDRVQGLTLTLPDKLTALQVEFRSAGGTTLETVEVP IRRAGKCGLVWAHHGPTIPRNPRAPNSVPPDVMASPIVIPAPEAKIPVAEAKSKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49522; Mature: 49391
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAARPSWLSCVIIAGLASGCVTTREQEISPAPSVVQAYLDDKPTELRRHFFIAQAQGDRN CCCCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCHHHHHHHEEEEECCCCHH RVLNDMRLGLASFGLGRDQLAAQLFDDALGGIEAIYADNDDARRARGLWVKEGTKDFKGE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCEEECCCCCCCCC PYERVMAYYYRGLLYMKAGDYENARASFKGGLLQDSFAEEEQFRADFALMPFLQGWAAHC CHHHHHHHHHHCEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC SGNDSLAAEDFKEFRAINKDAPLPRDKDNILVLVESGAAPVKTSDGPRLKIKRSGSTETA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEE RISWADPEHPKDHPGANAILLEDIFRQASTRGGRPFDSILEGKADYKDTADTVGNVALIG EEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHH AVLAAKVAVDNGPRRHETKEQRKNREQAQAGAAMVGAGLAVIGGLSKLFASSIEAQADTR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWDNLSDRVQGLTLTLPDKLTALQVEFRSAGGTTLETVEVPIRRAGKCGLVWAHHGPTIP HHCCHHHHHCCEEEECCCCCEEEEEEEECCCCCEEEEEEHHHHCCCCCCEEEECCCCCCC RNPRAPNSVPPDVMASPIVIPAPEAKIPVAEAKSKE CCCCCCCCCCCHHHCCCEEEECCCCCCCHHCCCCCC >Mature Secondary Structure AARPSWLSCVIIAGLASGCVTTREQEISPAPSVVQAYLDDKPTELRRHFFIAQAQGDRN CCCCHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHCCCHHHHHHHEEEEECCCCHH RVLNDMRLGLASFGLGRDQLAAQLFDDALGGIEAIYADNDDARRARGLWVKEGTKDFKGE HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCEEEEEECCCHHHHHCCCEEECCCCCCCCC PYERVMAYYYRGLLYMKAGDYENARASFKGGLLQDSFAEEEQFRADFALMPFLQGWAAHC CHHHHHHHHHHCEEEEECCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC SGNDSLAAEDFKEFRAINKDAPLPRDKDNILVLVESGAAPVKTSDGPRLKIKRSGSTETA CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCEE RISWADPEHPKDHPGANAILLEDIFRQASTRGGRPFDSILEGKADYKDTADTVGNVALIG EEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHH AVLAAKVAVDNGPRRHETKEQRKNREQAQAGAAMVGAGLAVIGGLSKLFASSIEAQADTR HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWDNLSDRVQGLTLTLPDKLTALQVEFRSAGGTTLETVEVPIRRAGKCGLVWAHHGPTIP HHCCHHHHHCCEEEECCCCCEEEEEEEECCCCCEEEEEEHHHHCCCCCCEEEECCCCCCC RNPRAPNSVPPDVMASPIVIPAPEAKIPVAEAKSKE CCCCCCCCCCCHHHCCCEEEECCCCCCCHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA