Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

Click here to switch to the map view.

The map label for this gene is 83310896

Identifier: 83310896

GI number: 83310896

Start: 1935788

End: 1936960

Strand: Reverse

Name: 83310896

Synonym: amb1797

Alternate gene names: NA

Gene position: 1936960-1935788 (Counterclockwise)

Preceding gene: 83310897

Following gene: 83310892

Centisome position: 39.0

GC content: 69.82

Gene sequence:

>1173_bases
ATGATCCCGCGCATCCTGGCCGTTTCGGCCCTCGCCCTGCTGGTGGCGCTTCCCGCCTCGGCCCAGACCGTGGGCGCCAA
GGTGCCGCCCTACCAGCCTCCGCCCAAGGTCGCGCCGCCGGTGCGCGACGGCGGCGAGGCGCTGGACGCCATCGCCGCCA
GGCCCGATCCCTTCAAGCCCCAGGACGACGTCATCGCCCATTTCCGCGACGCCTATGCCCAGGCCGGGCGGCCGCGCCTG
ACCATCTGGTGGAACCGGCAATTGTCGGACACCCTGGCCCAGTGGTACTCGGAAAGCCGCACCGTCACCGCCGACAAGAC
CCGCAACGCCACCGAGGGCGATCTCACCCTCAAGCAATCGGGCGGCCGCCAGAGCGTCACCGAGACCCAGCGGCGGACCG
GCGATTCGGCCGAGCGCCCGGCCCGGGAGGAAACCTGGGACTGGGAGTTCCAGGACGGCTTCCTGGCGCCTTTCCTGCAA
GCCGACGCCCAGATCGTCGACCGCACGGTGGTCACCCGGATCATGGGGGCTGGGGCCGAGGAGATCGATCCCAAGACGGT
GGAGGTCATGGTCATGCAGACCATGGCCGACGTGATGATCGAGGTTCTGGTGGCGGATTCCGCCCTGTCGACCACTGGCT
ACGAATTGCGCGCCCGGATCATCGACGTCAAGACCGGCCGGGTCCTGGGGATGGTCAACAGCCGGTCCCTGAAGGAATGG
CAGAAGACCGACAAGGCCACCGCCTCGCAGCGGGGCTTCGAACTGCCCGACGAGGACGACGACAGCTTTGGCCCCGAGCG
CGCCGACCAGCGCTACAAGGCTACCTCCAGCGGCTATGAACGCCGCCGCAAGCCGCCCAAGCTGGCCGTCATCTCCCACA
ATCTGGCCACCAATGTGATGAGCGCCATGCTGCCGCGTCTGGAAAGCGGCGCCCTTCCGGTCGCCCGGACCGCGCCTGCC
GCGCCCGCCGCCATCACGCCGCCCCCGGCACCGCCGCAATCGGAAACACCGGCCCAGGCCAAGCCCGCCCCCAACGACAG
CGCCGTGCCGCTGCCCCAGGTGGAGACCAAGCCCCTGCCCGCTCCGGACAAGGCGGCGAAGGCCGAGCCCCAGAAAGTCG
AAACGGGGCCGGCGGCCGAAGAACCGCCCATGCCCCGTCCAACCAAACAGTGA

Upstream 100 bases:

>100_bases
GTCGACTGCATTTGGGGGCACGGACCTCCAACACCTACCGCGAGCTGTCGCTGGGCGACAAGAGCGTGGACGGCTACATG
ATCGAGATGAGGGAAGGCCA

Downstream 100 bases:

>100_bases
TCGGGAGTTACACCAAACTGTGATGAGCTCAACTCATCGCAGTTTGGTTAGGCGCAAGGCGCCGCGCGCCTTATGGCGTG
CAAGGCAAGGGCGCTCGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MIPRILAVSALALLVALPASAQTVGAKVPPYQPPPKVAPPVRDGGEALDAIAARPDPFKPQDDVIAHFRDAYAQAGRPRL
TIWWNRQLSDTLAQWYSESRTVTADKTRNATEGDLTLKQSGGRQSVTETQRRTGDSAERPAREETWDWEFQDGFLAPFLQ
ADAQIVDRTVVTRIMGAGAEEIDPKTVEVMVMQTMADVMIEVLVADSALSTTGYELRARIIDVKTGRVLGMVNSRSLKEW
QKTDKATASQRGFELPDEDDDSFGPERADQRYKATSSGYERRRKPPKLAVISHNLATNVMSAMLPRLESGALPVARTAPA
APAAITPPPAPPQSETPAQAKPAPNDSAVPLPQVETKPLPAPDKAAKAEPQKVETGPAAEEPPMPRPTKQ

Sequences:

>Translated_390_residues
MIPRILAVSALALLVALPASAQTVGAKVPPYQPPPKVAPPVRDGGEALDAIAARPDPFKPQDDVIAHFRDAYAQAGRPRL
TIWWNRQLSDTLAQWYSESRTVTADKTRNATEGDLTLKQSGGRQSVTETQRRTGDSAERPAREETWDWEFQDGFLAPFLQ
ADAQIVDRTVVTRIMGAGAEEIDPKTVEVMVMQTMADVMIEVLVADSALSTTGYELRARIIDVKTGRVLGMVNSRSLKEW
QKTDKATASQRGFELPDEDDDSFGPERADQRYKATSSGYERRRKPPKLAVISHNLATNVMSAMLPRLESGALPVARTAPA
APAAITPPPAPPQSETPAQAKPAPNDSAVPLPQVETKPLPAPDKAAKAEPQKVETGPAAEEPPMPRPTKQ
>Mature_390_residues
MIPRILAVSALALLVALPASAQTVGAKVPPYQPPPKVAPPVRDGGEALDAIAARPDPFKPQDDVIAHFRDAYAQAGRPRL
TIWWNRQLSDTLAQWYSESRTVTADKTRNATEGDLTLKQSGGRQSVTETQRRTGDSAERPAREETWDWEFQDGFLAPFLQ
ADAQIVDRTVVTRIMGAGAEEIDPKTVEVMVMQTMADVMIEVLVADSALSTTGYELRARIIDVKTGRVLGMVNSRSLKEW
QKTDKATASQRGFELPDEDDDSFGPERADQRYKATSSGYERRRKPPKLAVISHNLATNVMSAMLPRLESGALPVARTAPA
APAAITPPPAPPQSETPAQAKPAPNDSAVPLPQVETKPLPAPDKAAKAEPQKVETGPAAEEPPMPRPTKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42311; Mature: 42311

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPRILAVSALALLVALPASAQTVGAKVPPYQPPPKVAPPVRDGGEALDAIAARPDPFKP
CCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
QDDVIAHFRDAYAQAGRPRLTIWWNRQLSDTLAQWYSESRTVTADKTRNATEGDLTLKQS
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEECC
GGRQSVTETQRRTGDSAERPAREETWDWEFQDGFLAPFLQADAQIVDRTVVTRIMGAGAE
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EIDPKTVEVMVMQTMADVMIEVLVADSALSTTGYELRARIIDVKTGRVLGMVNSRSLKEW
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEEEEECCEEEEECCCHHHHHH
QKTDKATASQRGFELPDEDDDSFGPERADQRYKATSSGYERRRKPPKLAVISHNLATNVM
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
SAMLPRLESGALPVARTAPAAPAAITPPPAPPQSETPAQAKPAPNDSAVPLPQVETKPLP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APDKAAKAEPQKVETGPAAEEPPMPRPTKQ
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPRILAVSALALLVALPASAQTVGAKVPPYQPPPKVAPPVRDGGEALDAIAARPDPFKP
CCCHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCC
QDDVIAHFRDAYAQAGRPRLTIWWNRQLSDTLAQWYSESRTVTADKTRNATEGDLTLKQS
HHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHCCCEEECCCCCCCCCCCEEEECC
GGRQSVTETQRRTGDSAERPAREETWDWEFQDGFLAPFLQADAQIVDRTVVTRIMGAGAE
CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EIDPKTVEVMVMQTMADVMIEVLVADSALSTTGYELRARIIDVKTGRVLGMVNSRSLKEW
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEEEEEEEECCEEEEECCCHHHHHH
QKTDKATASQRGFELPDEDDDSFGPERADQRYKATSSGYERRRKPPKLAVISHNLATNVM
HHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHH
SAMLPRLESGALPVARTAPAAPAAITPPPAPPQSETPAQAKPAPNDSAVPLPQVETKPLP
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
APDKAAKAEPQKVETGPAAEEPPMPRPTKQ
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA