Definition Magnetospirillum magneticum AMB-1 chromosome, complete genome.
Accession NC_007626
Length 4,967,148

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The map label for this gene is 83310887

Identifier: 83310887

GI number: 83310887

Start: 1926135

End: 1928672

Strand: Reverse

Name: 83310887

Synonym: amb1788

Alternate gene names: NA

Gene position: 1928672-1926135 (Counterclockwise)

Preceding gene: 83310888

Following gene: 83310884

Centisome position: 38.83

GC content: 71.12

Gene sequence:

>2538_bases
ATGGATGGCGAGGCCTGGCGGGGGCGCATCGAGGCTGAAGCCTCTGCCCTGCTGCGGCGCAAGGTTACCGTGGCCGGTCC
CATCGCCTTGCGCATTCTCCCCAGCCCCGCCGTGACCTTGGCTTCGGTGGCGGTGGACGGCACCGCCGCCCTGGACCGGG
TGCGCGTCGGCTTGTCCCTGGGCGCCCTGCTGGCCGGGCGACCGGAACTGACGGACTTGGTCATCGAGGGCGGCCGCGCC
GGTCCCCTGGACGGCCTCAACCTGCGCGCCACCATGACGGGCGAGACCTTTGCCGTCCGGGGCGAGGCCAAGCTGTGGGG
ACGGCCCGCCACCCTGGAGGCCCAGGGCCGCCGCCCCTCCGGCGAGGCCATGGCGCCGCTGAAGGCGAAAGTGGCGCAGC
CCTCCCTGGAAAGCGAAGCCAGTTTCGAGGGCACTTTCGGCAAGAGCGGCGTGACGGGCAAGATCGACCTGTCGCTGGCC
TCCCTGTCCCGCGCCGCCGGGTCGGACCAGTTGCCCGACGCCCCGCTGTCCGCCCAGGCCGAGTTGCGCCTGTCGCCCGA
CGAGGTGGTGATCTCGGACCTGGGCATCATCCTGGGCGAGTCCACCATCACCGGCAGCGTGGTGGCCAGCCTGACGGCAC
CGGCCCTGATGGATATCACCCTGAGGGCCGACAGCTTCGATCTCGACACCCGGCGCCCGGCGGCGACGGCACAGGCCCCG
ACTCAACCACAAAAGCAGGCGGCGTCCGCCCAGACCCCCGCCCCGACTCAACCCCAAATGCAGGCGGCCCCCGCCGCCGC
CCAGCCCTTCGAGCTGCCGCGCGGTCTGGCCGCCAATCTCGACGTGGGCATCGGAAGGCTGAAATGGCGGGGCGAGACCG
TTTCCAACATTCAAATCAATGCCTTGCTGGAGGGCGAGCGCCTGACCCTGTCGCAGGCCTCGGCCCGGCTGCCGGGCGCC
GGCTCGGTCAAGCTGACCGGCGCCATGGTGACACCGGAAGGCCGCCCGCGCTTTGACGGCACCTTGAAGGCCGAGAGCCG
CAATCTCCCTGAACTACGCAAGTGGTTGAGGATCGGCTCCGCCGCCACCCCCATCCGTGGGAAGCTTGAGAGCAAGGTCC
AGGTGACCGACAGCCGCCTTTCTCTCAATGCCCTGACCCTTGACCTGGACGAGCGGCGCATCACCGGCATGATCAGCGCC
GGTCTCGCCCAGCCCATCCCCCTCAAGGCCGAACTGGGCCTTCCCGGTCTGGCCCTGGGCTTCGACGGAACCCTGGGCGA
CGGCCGGCTGGAGGGCGGCGCCAGCCTGCGGGCCGCCGGCTTCGCCCAGGCCATCCGCGCCCTTGCCCCCGGCTACCGCC
CACGCGGCAATGGCGAACTGGCGGTCAGCGCCCGGGTTGAAGGCAGCGAGGGGCGCATCACTCTGTCCGAGCTGCAGGCC
AAGGCGGGGGATGCCCTCGTTACCGGCAAGGCCAGCCTGTCCCTGGAGGCAAGCCCCAAGCTCACCGCCAGCCTGTCGGG
CAATGCCATCGCGCTGGACCCTTTCCTGCCCGCCGAGGCGAGCGACAAGGCCGAGGAATCCAAGCCTCGGCGCCGCACCG
GCCATGCCGCGCCGCCGCCGCCGCCGATCATTCCCGCCGCCCTGTCCTCCAACTCGTCATGGTCGAAGGCCCCCCTGGAC
CTGGGCTGGCTGCAGGCGCTGGACGCCGATCTCGACCTGGACGCCAAGGCCATCACCGCCTCCGGCTGGCGCCTGGAGCA
GCCGCGCGGCCATGTGGGGCTGACCAAGGGCGTCGCCGATCTCGATCGCTTTTCCGCCCGCCTGCTGGGCGGCGATCTGG
CCGCCGCCGCCCGGCTGGCCGCCAACGGGCTGACCCTGTCGGCCAACCTCAAGGGCGCCGACCTCGCCCAGCTGAAGCCC
GCCGGCGGTGGCCTGAAACTGGAAAAGGGCCGCATGAGCGCCGACCTGCGCCTCGCCGCCGCCGGCACCTCTCCCGCCGC
CCTGGTGGGCAGCCTGGCCGGCAACGGCAAGGTGGAGGTGGCCGATGGCGAGGTCAGCGGCTTTGACCTTGCCGCCCTGG
ATGGGCAGATGCGCAGGCTAGAGAATTTGGGCAGCCTGTTCGGGCTGATCCAGACCGGGCTGTCGGGCGGCAAGTCCCGC
TTTTCCAGCCTGTCCGGCACCTTCAACGCCGACAGGGGCATCGTCGCCAGTCGCGACATGGCCCTGGTGGCCGAAGGCGG
CGGCGCCACCGGCATCGCCACCGTCGACCTCCCGCGTGAGACCATTTCGTCGAAGATCGCCTTCAAGCTGGCCACCCCCG
ACGCCCCCGCCCTGGGGCTGCGCCTGGAGGGGTCGCTGGCCGCGCCGGTCAAGGCCATCGACGTCAACGACCTGCAACGC
TGGCTGGTGGAAAAGGGCCTGGGCAAGGCCCTGAATCCCAAGGGCGCCGGAGAGAATTCCGACGCCCCCAGGAAGCTCAA
GGCCGGCGACGCGCTGCGCGGCCTGTTCTCCGCCTTCGGCAAGAAGAAGGCGGAGTAG

Upstream 100 bases:

>100_bases
ATCGCCCTTGTCCCGCCTGCCGGTCAGCAAACCCGTCGCCATCGCCGCCACCACCATCGTCGGTGGGGGCCTGATCCTTG
CCCTTGCGGCGCCCGCCCTG

Downstream 100 bases:

>100_bases
CCAGCCCAATGTGGGCTGCCGCCCACCCCCGCTCGGGGCGAACCCCGAACCCCCTTTGATTCTATCTATAAAATCAAAGG
GGGCTTGGGGCATCGCCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 845; Mature: 845

Protein sequence:

>845_residues
MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSLGALLAGRPELTDLVIEGGRA
GPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPSGEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLA
SLSRAAGSDQLPDAPLSAQAELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP
TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQINALLEGERLTLSQASARLPGA
GSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGSAATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISA
GLAQPIPLKAELGLPGLALGFDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA
KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPPPPIIPAALSSNSSWSKAPLD
LGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVADLDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKP
AGGGLKLEKGRMSADLRLAAAGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR
FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGLRLEGSLAAPVKAIDVNDLQR
WLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFGKKKAE

Sequences:

>Translated_845_residues
MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSLGALLAGRPELTDLVIEGGRA
GPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPSGEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLA
SLSRAAGSDQLPDAPLSAQAELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP
TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQINALLEGERLTLSQASARLPGA
GSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGSAATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISA
GLAQPIPLKAELGLPGLALGFDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA
KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPPPPIIPAALSSNSSWSKAPLD
LGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVADLDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKP
AGGGLKLEKGRMSADLRLAAAGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR
FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGLRLEGSLAAPVKAIDVNDLQR
WLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFGKKKAE
>Mature_845_residues
MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSLGALLAGRPELTDLVIEGGRA
GPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPSGEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLA
SLSRAAGSDQLPDAPLSAQAELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP
TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQINALLEGERLTLSQASARLPGA
GSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGSAATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISA
GLAQPIPLKAELGLPGLALGFDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA
KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPPPPIIPAALSSNSSWSKAPLD
LGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVADLDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKP
AGGGLKLEKGRMSADLRLAAAGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR
FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGLRLEGSLAAPVKAIDVNDLQR
WLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFGKKKAE

Specific function: Unknown

COG id: COG2982

COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86838; Mature: 86838

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSL
CCCCHHCCCHHHHHHHHHHHCCEEECCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHH
GALLAGRPELTDLVIEGGRAGPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPS
HHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEECCHHCCCCCCEEEECCCCCC
GEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLASLSRAAGSDQLPDAPLSAQA
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCE
ELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP
EEEECCHHEEHHHHHEEECCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCC
TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQIN
CCHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEE
ALLEGERLTLSQASARLPGAGSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGS
EEECCCEEEEHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCC
AATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISAGLAQPIPLKAELGLPGLALG
CCCCCCCCCCCEEEEECCEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCEEEEC
FDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHH
KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPP
CCCCEEEECCCEEEEECCCCEEEECCCCEEEECCCCCCCCCCCHHHCCCHHHCCCCCCCC
PPIIPAALSSNSSWSKAPLDLGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVAD
CCCEEHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCHHCHHH
LDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKPAGGGLKLEKGRMSADLRLAA
HHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCHHEECCCCCCEEEECCCCCCCEEEEE
AGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR
CCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHCCCCCHHH
FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGL
HHHCCCCCCCCCCEEEECCEEEEECCCCCCEEEEEECCHHHHCCEEEEEEECCCCCEEEE
RLEGSLAAPVKAIDVNDLQRWLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFG
EECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
KKKAE
CCCCC
>Mature Secondary Structure
MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSL
CCCCHHCCCHHHHHHHHHHHCCEEECCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHH
GALLAGRPELTDLVIEGGRAGPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPS
HHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEECCHHCCCCCCEEEECCCCCC
GEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLASLSRAAGSDQLPDAPLSAQA
CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCE
ELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP
EEEECCHHEEHHHHHEEECCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCC
TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQIN
CCHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEE
ALLEGERLTLSQASARLPGAGSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGS
EEECCCEEEEHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCC
AATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISAGLAQPIPLKAELGLPGLALG
CCCCCCCCCCCEEEEECCEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCEEEEC
FDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHH
KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPP
CCCCEEEECCCEEEEECCCCEEEECCCCEEEECCCCCCCCCCCHHHCCCHHHCCCCCCCC
PPIIPAALSSNSSWSKAPLDLGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVAD
CCCEEHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCHHCHHH
LDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKPAGGGLKLEKGRMSADLRLAA
HHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCHHEECCCCCCEEEECCCCCCCEEEEE
AGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR
CCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHCCCCCHHH
FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGL
HHHCCCCCCCCCCEEEECCEEEEECCCCCCEEEEEECCHHHHCCEEEEEEECCCCCEEEE
RLEGSLAAPVKAIDVNDLQRWLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFG
EECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC
KKKAE
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA