| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310887
Identifier: 83310887
GI number: 83310887
Start: 1926135
End: 1928672
Strand: Reverse
Name: 83310887
Synonym: amb1788
Alternate gene names: NA
Gene position: 1928672-1926135 (Counterclockwise)
Preceding gene: 83310888
Following gene: 83310884
Centisome position: 38.83
GC content: 71.12
Gene sequence:
>2538_bases ATGGATGGCGAGGCCTGGCGGGGGCGCATCGAGGCTGAAGCCTCTGCCCTGCTGCGGCGCAAGGTTACCGTGGCCGGTCC CATCGCCTTGCGCATTCTCCCCAGCCCCGCCGTGACCTTGGCTTCGGTGGCGGTGGACGGCACCGCCGCCCTGGACCGGG TGCGCGTCGGCTTGTCCCTGGGCGCCCTGCTGGCCGGGCGACCGGAACTGACGGACTTGGTCATCGAGGGCGGCCGCGCC GGTCCCCTGGACGGCCTCAACCTGCGCGCCACCATGACGGGCGAGACCTTTGCCGTCCGGGGCGAGGCCAAGCTGTGGGG ACGGCCCGCCACCCTGGAGGCCCAGGGCCGCCGCCCCTCCGGCGAGGCCATGGCGCCGCTGAAGGCGAAAGTGGCGCAGC CCTCCCTGGAAAGCGAAGCCAGTTTCGAGGGCACTTTCGGCAAGAGCGGCGTGACGGGCAAGATCGACCTGTCGCTGGCC TCCCTGTCCCGCGCCGCCGGGTCGGACCAGTTGCCCGACGCCCCGCTGTCCGCCCAGGCCGAGTTGCGCCTGTCGCCCGA CGAGGTGGTGATCTCGGACCTGGGCATCATCCTGGGCGAGTCCACCATCACCGGCAGCGTGGTGGCCAGCCTGACGGCAC CGGCCCTGATGGATATCACCCTGAGGGCCGACAGCTTCGATCTCGACACCCGGCGCCCGGCGGCGACGGCACAGGCCCCG ACTCAACCACAAAAGCAGGCGGCGTCCGCCCAGACCCCCGCCCCGACTCAACCCCAAATGCAGGCGGCCCCCGCCGCCGC CCAGCCCTTCGAGCTGCCGCGCGGTCTGGCCGCCAATCTCGACGTGGGCATCGGAAGGCTGAAATGGCGGGGCGAGACCG TTTCCAACATTCAAATCAATGCCTTGCTGGAGGGCGAGCGCCTGACCCTGTCGCAGGCCTCGGCCCGGCTGCCGGGCGCC GGCTCGGTCAAGCTGACCGGCGCCATGGTGACACCGGAAGGCCGCCCGCGCTTTGACGGCACCTTGAAGGCCGAGAGCCG CAATCTCCCTGAACTACGCAAGTGGTTGAGGATCGGCTCCGCCGCCACCCCCATCCGTGGGAAGCTTGAGAGCAAGGTCC AGGTGACCGACAGCCGCCTTTCTCTCAATGCCCTGACCCTTGACCTGGACGAGCGGCGCATCACCGGCATGATCAGCGCC GGTCTCGCCCAGCCCATCCCCCTCAAGGCCGAACTGGGCCTTCCCGGTCTGGCCCTGGGCTTCGACGGAACCCTGGGCGA CGGCCGGCTGGAGGGCGGCGCCAGCCTGCGGGCCGCCGGCTTCGCCCAGGCCATCCGCGCCCTTGCCCCCGGCTACCGCC CACGCGGCAATGGCGAACTGGCGGTCAGCGCCCGGGTTGAAGGCAGCGAGGGGCGCATCACTCTGTCCGAGCTGCAGGCC AAGGCGGGGGATGCCCTCGTTACCGGCAAGGCCAGCCTGTCCCTGGAGGCAAGCCCCAAGCTCACCGCCAGCCTGTCGGG CAATGCCATCGCGCTGGACCCTTTCCTGCCCGCCGAGGCGAGCGACAAGGCCGAGGAATCCAAGCCTCGGCGCCGCACCG GCCATGCCGCGCCGCCGCCGCCGCCGATCATTCCCGCCGCCCTGTCCTCCAACTCGTCATGGTCGAAGGCCCCCCTGGAC CTGGGCTGGCTGCAGGCGCTGGACGCCGATCTCGACCTGGACGCCAAGGCCATCACCGCCTCCGGCTGGCGCCTGGAGCA GCCGCGCGGCCATGTGGGGCTGACCAAGGGCGTCGCCGATCTCGATCGCTTTTCCGCCCGCCTGCTGGGCGGCGATCTGG CCGCCGCCGCCCGGCTGGCCGCCAACGGGCTGACCCTGTCGGCCAACCTCAAGGGCGCCGACCTCGCCCAGCTGAAGCCC GCCGGCGGTGGCCTGAAACTGGAAAAGGGCCGCATGAGCGCCGACCTGCGCCTCGCCGCCGCCGGCACCTCTCCCGCCGC CCTGGTGGGCAGCCTGGCCGGCAACGGCAAGGTGGAGGTGGCCGATGGCGAGGTCAGCGGCTTTGACCTTGCCGCCCTGG ATGGGCAGATGCGCAGGCTAGAGAATTTGGGCAGCCTGTTCGGGCTGATCCAGACCGGGCTGTCGGGCGGCAAGTCCCGC TTTTCCAGCCTGTCCGGCACCTTCAACGCCGACAGGGGCATCGTCGCCAGTCGCGACATGGCCCTGGTGGCCGAAGGCGG CGGCGCCACCGGCATCGCCACCGTCGACCTCCCGCGTGAGACCATTTCGTCGAAGATCGCCTTCAAGCTGGCCACCCCCG ACGCCCCCGCCCTGGGGCTGCGCCTGGAGGGGTCGCTGGCCGCGCCGGTCAAGGCCATCGACGTCAACGACCTGCAACGC TGGCTGGTGGAAAAGGGCCTGGGCAAGGCCCTGAATCCCAAGGGCGCCGGAGAGAATTCCGACGCCCCCAGGAAGCTCAA GGCCGGCGACGCGCTGCGCGGCCTGTTCTCCGCCTTCGGCAAGAAGAAGGCGGAGTAG
Upstream 100 bases:
>100_bases ATCGCCCTTGTCCCGCCTGCCGGTCAGCAAACCCGTCGCCATCGCCGCCACCACCATCGTCGGTGGGGGCCTGATCCTTG CCCTTGCGGCGCCCGCCCTG
Downstream 100 bases:
>100_bases CCAGCCCAATGTGGGCTGCCGCCCACCCCCGCTCGGGGCGAACCCCGAACCCCCTTTGATTCTATCTATAAAATCAAAGG GGGCTTGGGGCATCGCCCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 845; Mature: 845
Protein sequence:
>845_residues MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSLGALLAGRPELTDLVIEGGRA GPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPSGEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLA SLSRAAGSDQLPDAPLSAQAELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQINALLEGERLTLSQASARLPGA GSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGSAATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISA GLAQPIPLKAELGLPGLALGFDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPPPPIIPAALSSNSSWSKAPLD LGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVADLDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKP AGGGLKLEKGRMSADLRLAAAGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGLRLEGSLAAPVKAIDVNDLQR WLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFGKKKAE
Sequences:
>Translated_845_residues MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSLGALLAGRPELTDLVIEGGRA GPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPSGEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLA SLSRAAGSDQLPDAPLSAQAELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQINALLEGERLTLSQASARLPGA GSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGSAATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISA GLAQPIPLKAELGLPGLALGFDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPPPPIIPAALSSNSSWSKAPLD LGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVADLDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKP AGGGLKLEKGRMSADLRLAAAGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGLRLEGSLAAPVKAIDVNDLQR WLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFGKKKAE >Mature_845_residues MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSLGALLAGRPELTDLVIEGGRA GPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPSGEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLA SLSRAAGSDQLPDAPLSAQAELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQINALLEGERLTLSQASARLPGA GSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGSAATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISA GLAQPIPLKAELGLPGLALGFDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPPPPIIPAALSSNSSWSKAPLD LGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVADLDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKP AGGGLKLEKGRMSADLRLAAAGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGLRLEGSLAAPVKAIDVNDLQR WLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFGKKKAE
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86838; Mature: 86838
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSL CCCCHHCCCHHHHHHHHHHHCCEEECCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHH GALLAGRPELTDLVIEGGRAGPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPS HHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEECCHHCCCCCCEEEECCCCCC GEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLASLSRAAGSDQLPDAPLSAQA CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCE ELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP EEEECCHHEEHHHHHEEECCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCC TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQIN CCHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEE ALLEGERLTLSQASARLPGAGSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGS EEECCCEEEEHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCC AATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISAGLAQPIPLKAELGLPGLALG CCCCCCCCCCCEEEEECCEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCEEEEC FDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHH KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPP CCCCEEEECCCEEEEECCCCEEEECCCCEEEECCCCCCCCCCCHHHCCCHHHCCCCCCCC PPIIPAALSSNSSWSKAPLDLGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVAD CCCEEHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCHHCHHH LDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKPAGGGLKLEKGRMSADLRLAA HHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCHHEECCCCCCEEEECCCCCCCEEEEE AGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR CCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHCCCCCHHH FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGL HHHCCCCCCCCCCEEEECCEEEEECCCCCCEEEEEECCHHHHCCEEEEEEECCCCCEEEE RLEGSLAAPVKAIDVNDLQRWLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFG EECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC KKKAE CCCCC >Mature Secondary Structure MDGEAWRGRIEAEASALLRRKVTVAGPIALRILPSPAVTLASVAVDGTAALDRVRVGLSL CCCCHHCCCHHHHHHHHHHHCCEEECCEEEEEECCCCEEEEEEEECCHHHHHHHHHHHHH GALLAGRPELTDLVIEGGRAGPLDGLNLRATMTGETFAVRGEAKLWGRPATLEAQGRRPS HHHHCCCCCCEEEEEECCCCCCCCCCEEEEEECCCEEEEECCHHCCCCCCEEEECCCCCC GEAMAPLKAKVAQPSLESEASFEGTFGKSGVTGKIDLSLASLSRAAGSDQLPDAPLSAQA CCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHCCCCCCCCCCCCCCE ELRLSPDEVVISDLGIILGESTITGSVVASLTAPALMDITLRADSFDLDTRRPAATAQAP EEEECCHHEEHHHHHEEECCCCCCHHHHHHHHCCEEEEEEEECCCCCCCCCCCCCCCCCC TQPQKQAASAQTPAPTQPQMQAAPAAAQPFELPRGLAANLDVGIGRLKWRGETVSNIQIN CCHHHHHHCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEE ALLEGERLTLSQASARLPGAGSVKLTGAMVTPEGRPRFDGTLKAESRNLPELRKWLRIGS EEECCCEEEEHHHHCCCCCCCCEEEEEEEECCCCCCCCCCEEECCCCCCHHHHHHHHCCC AATPIRGKLESKVQVTDSRLSLNALTLDLDERRITGMISAGLAQPIPLKAELGLPGLALG CCCCCCCCCCCEEEEECCEEEEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCEEEEC FDGTLGDGRLEGGASLRAAGFAQAIRALAPGYRPRGNGELAVSARVEGSEGRITLSELQA CCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCEEHHHHHH KAGDALVTGKASLSLEASPKLTASLSGNAIALDPFLPAEASDKAEESKPRRRTGHAAPPP CCCCEEEECCCEEEEECCCCEEEECCCCEEEECCCCCCCCCCCHHHCCCHHHCCCCCCCC PPIIPAALSSNSSWSKAPLDLGWLQALDADLDLDAKAITASGWRLEQPRGHVGLTKGVAD CCCEEHCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEEECCEEECCCCCCCCCHHCHHH LDRFSARLLGGDLAAAARLAANGLTLSANLKGADLAQLKPAGGGLKLEKGRMSADLRLAA HHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCHHEECCCCCCEEEECCCCCCCEEEEE AGTSPAALVGSLAGNGKVEVADGEVSGFDLAALDGQMRRLENLGSLFGLIQTGLSGGKSR CCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHCHHHHHHHHHHHHHHHHHHCCCCCHHH FSSLSGTFNADRGIVASRDMALVAEGGGATGIATVDLPRETISSKIAFKLATPDAPALGL HHHCCCCCCCCCCEEEECCEEEEECCCCCCEEEEEECCHHHHCCEEEEEEECCCCCEEEE RLEGSLAAPVKAIDVNDLQRWLVEKGLGKALNPKGAGENSDAPRKLKAGDALRGLFSAFG EECCCCCCCEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC KKKAE CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA