| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310799
Identifier: 83310799
GI number: 83310799
Start: 1847686
End: 1849089
Strand: Reverse
Name: 83310799
Synonym: amb1700
Alternate gene names: NA
Gene position: 1849089-1847686 (Counterclockwise)
Preceding gene: 83310805
Following gene: 83310798
Centisome position: 37.23
GC content: 62.32
Gene sequence:
>1404_bases ATGGCATCATCACCGGAATGGGCGGATATGGAGTTCCTCGCCCAGGCTCCGACCAGGGAAACGGCGCGCGACCTTTGTCT GCTGATCAACGATCTGTGCCACCTGTTCCGGATGGGGAAAACCGGTGTCCTGGAGGACACGGTCGATCACCCCGAACGCA GTCTGCTGTTCTACGCCTATCGGCAGGTGCGAGACCGTCCGTGGCTGGCCGAACCGGTGCGCGACATCTTCCGCCACATC ACCCTGGGTCTGGGCGAGGCTGTCCAGGTCGAACGCCTGCTTGATTCCCGCATCGCGGCCGTGGCCGAGGAAGACAGGCG GTACATTCGCGACACTCTTGCCGGAATGGCCGACACGTCGGCGCGGGAAAATCTGCGTGAGCGGCTGAACGATGCCGCCG CTGGCAAGGTGCTGGTGCTGCGGGCCTTGCGCAATTCCCTGGTAGCCCATGTGGGTGGCTACGCCCCCATGGTCGCGGCC GATTATGCCCGCTTCTCGCTGCCGGACACCTTGCGGATGGAATACGACGAGCTTTTCGACCTCATCGCCAACTCGGTGCG CACCCGCGTGGGAGGCGCGGCCGATCTGGTCCTCCCTGTCGATCCCATCGATCCCGCCAGTTACGATTATGACCGACGCA TGGCTCGCCGCCTCGGGGAGGAGAAGGAAGAGGTTGAAGAGGCGGTTGAGCCGGTTCCCGACCTGGAGGGCAGGTTGAAC GCCATCGCCCAGGGTTGGGCCAATGATGATCCCGTCTGGCGCCAGTCGGTTGACCGATTGGCGGGATATCTCCAGCTCAT CCGCGAACGCTCGCTGAAGGAATTGATGCGGCTGGTTGATGAAGGAAATTGGGCCATCAGCCTGCTGGGGCTACCGACAC CAGTGGTCAGCCGAATCTTCGGCTTGATGAGCAACGGTGCCCAGGCGTCACTCCTCCGGCATATGGAGGAACATTGCGAT TTCGATGGCATTTGCCTGACCCATGGCGCTGTGTCCAGAACGCGGGAGAGCGTCCTTCAGGTCATCGAGCAGAAGGGGCT GGTCGATGGCGGCGCGGCACGGCTGAAGACGATCATGCATGCGCCTCTGGGCTACGAGGCGTTCGATGCCCTGGCGACGC TGGACGATGGTGAGCTGAACGCGCTATGGCGCCAGACCAGCAAGGATACGGTCGGGACCGCATTGCTGGGCACCACCACC GAGGTCGCCGTTCGCCTCCTCAGCCGCCTGAGCGAGGACGCCCGCCAGATGATGCTGGACGATATGGAGAGCCTATCCGC CGAGAAGACAACGGCTGATATCCAACAGGCTCAAAGGGATGTGCTCATGTCATGGGATGATGACGCGACAATGGATGAGA CGCTGGCCGGAATCCGGGCAATTTTGGCAGAATCGGCATCATGA
Upstream 100 bases:
>100_bases TATTATTGCCCGGATTTTTGTTGCGGATAAATACCAGAGCCTGTCCGTCTATTCCCGAAACTCGGGTATGATCCCCGGCG GCAAAGAGGGGGAAAGCGAA
Downstream 100 bases:
>100_bases GTGGAATTGCTTCGATCCGCTCATTGATCCGCGAAGCACCGACGCGGAAAGCCGCCCTGGCCTTGCTGCTGTGCCTCTAC GACCTTTGGTCCTTGGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 467; Mature: 466
Protein sequence:
>467_residues MASSPEWADMEFLAQAPTRETARDLCLLINDLCHLFRMGKTGVLEDTVDHPERSLLFYAYRQVRDRPWLAEPVRDIFRHI TLGLGEAVQVERLLDSRIAAVAEEDRRYIRDTLAGMADTSARENLRERLNDAAAGKVLVLRALRNSLVAHVGGYAPMVAA DYARFSLPDTLRMEYDELFDLIANSVRTRVGGAADLVLPVDPIDPASYDYDRRMARRLGEEKEEVEEAVEPVPDLEGRLN AIAQGWANDDPVWRQSVDRLAGYLQLIRERSLKELMRLVDEGNWAISLLGLPTPVVSRIFGLMSNGAQASLLRHMEEHCD FDGICLTHGAVSRTRESVLQVIEQKGLVDGGAARLKTIMHAPLGYEAFDALATLDDGELNALWRQTSKDTVGTALLGTTT EVAVRLLSRLSEDARQMMLDDMESLSAEKTTADIQQAQRDVLMSWDDDATMDETLAGIRAILAESAS
Sequences:
>Translated_467_residues MASSPEWADMEFLAQAPTRETARDLCLLINDLCHLFRMGKTGVLEDTVDHPERSLLFYAYRQVRDRPWLAEPVRDIFRHI TLGLGEAVQVERLLDSRIAAVAEEDRRYIRDTLAGMADTSARENLRERLNDAAAGKVLVLRALRNSLVAHVGGYAPMVAA DYARFSLPDTLRMEYDELFDLIANSVRTRVGGAADLVLPVDPIDPASYDYDRRMARRLGEEKEEVEEAVEPVPDLEGRLN AIAQGWANDDPVWRQSVDRLAGYLQLIRERSLKELMRLVDEGNWAISLLGLPTPVVSRIFGLMSNGAQASLLRHMEEHCD FDGICLTHGAVSRTRESVLQVIEQKGLVDGGAARLKTIMHAPLGYEAFDALATLDDGELNALWRQTSKDTVGTALLGTTT EVAVRLLSRLSEDARQMMLDDMESLSAEKTTADIQQAQRDVLMSWDDDATMDETLAGIRAILAESAS >Mature_466_residues ASSPEWADMEFLAQAPTRETARDLCLLINDLCHLFRMGKTGVLEDTVDHPERSLLFYAYRQVRDRPWLAEPVRDIFRHIT LGLGEAVQVERLLDSRIAAVAEEDRRYIRDTLAGMADTSARENLRERLNDAAAGKVLVLRALRNSLVAHVGGYAPMVAAD YARFSLPDTLRMEYDELFDLIANSVRTRVGGAADLVLPVDPIDPASYDYDRRMARRLGEEKEEVEEAVEPVPDLEGRLNA IAQGWANDDPVWRQSVDRLAGYLQLIRERSLKELMRLVDEGNWAISLLGLPTPVVSRIFGLMSNGAQASLLRHMEEHCDF DGICLTHGAVSRTRESVLQVIEQKGLVDGGAARLKTIMHAPLGYEAFDALATLDDGELNALWRQTSKDTVGTALLGTTTE VAVRLLSRLSEDARQMMLDDMESLSAEKTTADIQQAQRDVLMSWDDDATMDETLAGIRAILAESAS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51994; Mature: 51862
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSPEWADMEFLAQAPTRETARDLCLLINDLCHLFRMGKTGVLEDTVDHPERSLLFYAY CCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHH RQVRDRPWLAEPVRDIFRHITLGLGEAVQVERLLDSRIAAVAEEDRRYIRDTLAGMADTS HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ARENLRERLNDAAAGKVLVLRALRNSLVAHVGGYAPMVAADYARFSLPDTLRMEYDELFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH LIANSVRTRVGGAADLVLPVDPIDPASYDYDRRMARRLGEEKEEVEEAVEPVPDLEGRLN HHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH AIAQGWANDDPVWRQSVDRLAGYLQLIRERSLKELMRLVDEGNWAISLLGLPTPVVSRIF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH GLMSNGAQASLLRHMEEHCDFDGICLTHGAVSRTRESVLQVIEQKGLVDGGAARLKTIMH HHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH APLGYEAFDALATLDDGELNALWRQTSKDTVGTALLGTTTEVAVRLLSRLSEDARQMMLD CCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH DMESLSAEKTTADIQQAQRDVLMSWDDDATMDETLAGIRAILAESAS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASSPEWADMEFLAQAPTRETARDLCLLINDLCHLFRMGKTGVLEDTVDHPERSLLFYAY CCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHHHHHH RQVRDRPWLAEPVRDIFRHITLGLGEAVQVERLLDSRIAAVAEEDRRYIRDTLAGMADTS HHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH ARENLRERLNDAAAGKVLVLRALRNSLVAHVGGYAPMVAADYARFSLPDTLRMEYDELFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHH LIANSVRTRVGGAADLVLPVDPIDPASYDYDRRMARRLGEEKEEVEEAVEPVPDLEGRLN HHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHH AIAQGWANDDPVWRQSVDRLAGYLQLIRERSLKELMRLVDEGNWAISLLGLPTPVVSRIF HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHH GLMSNGAQASLLRHMEEHCDFDGICLTHGAVSRTRESVLQVIEQKGLVDGGAARLKTIMH HHHCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH APLGYEAFDALATLDDGELNALWRQTSKDTVGTALLGTTTEVAVRLLSRLSEDARQMMLD CCCCHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH DMESLSAEKTTADIQQAQRDVLMSWDDDATMDETLAGIRAILAESAS HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA