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The map label for this gene is hybB [H]

Identifier: 83310747

GI number: 83310747

Start: 1785384

End: 1786589

Strand: Reverse

Name: hybB [H]

Synonym: amb1648

Alternate gene names: 83310747

Gene position: 1786589-1785384 (Counterclockwise)

Preceding gene: 83310748

Following gene: 83310746

Centisome position: 35.97

GC content: 62.11

Gene sequence:

>1206_bases
ATGGTCAATCACCCCATCCCCAGCCAGGTGATCAGTCGCCTGAAAAAGGGTAAGGCCAGCCCCACCGCCATCGGCGGCTC
GCTGGTCACCCCCTTCACCATCGTGCTGGCCGTGCTGATCGGCATCAGCCTGTTCTTCATGGCCCAGCGCTTCATCTACG
GCCTGGGTGCCGTCACCAACATCAACAATGGCTACCCCTGGGGTATCTGGGTGGTGTGGGACGTGGTCATCGCCACGGGC
TTCGCCTGTGGCGGCTATGCCATGGCCCTGGTGTGCTACATCCTGAACCGGGGCGAGTACCACCATCTGGTCCGCCCGGC
GCTGACCGCCTCGCTGTTCGGCTATTCCCTGGGCGGCGCCTCGGTGCTGATCGACCTCGGCCGCTACTGGAACTTCTGGC
ACATCCTGTGGCCGGGCTATGCCCAGCCCGGTTCGGTGATGTTCGAAGTGGCCGCCTGCATCAGCTGCTACATCCTGGTG
CTGTGGATCGAGTTCTCGCCGGCCTTCCTCGAGCATTTCGGCTTCAAGAACCTCAAGGCCAAGCTGAACAAGGTCATGTT
CTTCTTCATCGGCCTGGGCGTGCTGCTGCCCACCATGCACCAATCCTCGCTGGGATCGCTGCTGGTGGTGTTCGGCTACC
AGATCCACCCGCTGTGGCAGACTCCGCTGCTGCCGCTCCTGTTCCTGCTGACCGCGGTGTGCATGGGCTTTGCCATCGTC
ATCGTCGAGGCGACCTGGGCGGCGGTGGGCTTCAAGCGCGACATCCATGACGAGCTTCCCATGCTGTCCAAGATCGGCAA
GATCATCATGGGCATCCTGGTGGCTTATCTGGTCATCCGCCTGGGCGACCTGGTGGTCAGAGGCGCCATCTTCAAGGTGT
TCACCTCCGGCGTGAAGAGCGTGATGTTCCTCATCGAGATGGCGGTGTTCATCTATCCGATCGTGGTTCTGTCGTCTCCC
GCCAACCGCAAGCGGCTGTCCAAGCTGCTGGCGGCGGCCATGAGCATGCTGACCGGCGCGATCTTGTACCGCATCGACGC
CTTTCTGGTGGCCTACGATACCGGCCCCGGCTGGCATTACTTCCCCAGCGTGCCCGAGATGATGGTCACCATCGGCGTGA
TCGCCATCGAAGTGCTCGCCTATATCATTTTCGTCCGGAAATTCCCCATTCTTCCCGGCCACTCGACCCCTGCGGCCGCC
GAGTAA

Upstream 100 bases:

>100_bases
CGCTGGCCGGTCTGGTCACCGCCGCCTGGCGGGGCTCCAAGGACCACCACGACGACGATGAGTTCGACATGTTCGACCAT
CCGGAAGGGGGGCACAAGTA

Downstream 100 bases:

>100_bases
GGAGACCTGAGCAGTGTCCAAGAGAATCACCATCGATCCCATCACCCGGATTGAAGGCCATCTGCGCATCGACGTCGAGG
TCGACGGCGGCAAGGTCACC

Product: putative hydrogenase 2 b cytochrome subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MVNHPIPSQVISRLKKGKASPTAIGGSLVTPFTIVLAVLIGISLFFMAQRFIYGLGAVTNINNGYPWGIWVVWDVVIATG
FACGGYAMALVCYILNRGEYHHLVRPALTASLFGYSLGGASVLIDLGRYWNFWHILWPGYAQPGSVMFEVAACISCYILV
LWIEFSPAFLEHFGFKNLKAKLNKVMFFFIGLGVLLPTMHQSSLGSLLVVFGYQIHPLWQTPLLPLLFLLTAVCMGFAIV
IVEATWAAVGFKRDIHDELPMLSKIGKIIMGILVAYLVIRLGDLVVRGAIFKVFTSGVKSVMFLIEMAVFIYPIVVLSSP
ANRKRLSKLLAAAMSMLTGAILYRIDAFLVAYDTGPGWHYFPSVPEMMVTIGVIAIEVLAYIIFVRKFPILPGHSTPAAA
E

Sequences:

>Translated_401_residues
MVNHPIPSQVISRLKKGKASPTAIGGSLVTPFTIVLAVLIGISLFFMAQRFIYGLGAVTNINNGYPWGIWVVWDVVIATG
FACGGYAMALVCYILNRGEYHHLVRPALTASLFGYSLGGASVLIDLGRYWNFWHILWPGYAQPGSVMFEVAACISCYILV
LWIEFSPAFLEHFGFKNLKAKLNKVMFFFIGLGVLLPTMHQSSLGSLLVVFGYQIHPLWQTPLLPLLFLLTAVCMGFAIV
IVEATWAAVGFKRDIHDELPMLSKIGKIIMGILVAYLVIRLGDLVVRGAIFKVFTSGVKSVMFLIEMAVFIYPIVVLSSP
ANRKRLSKLLAAAMSMLTGAILYRIDAFLVAYDTGPGWHYFPSVPEMMVTIGVIAIEVLAYIIFVRKFPILPGHSTPAAA
E
>Mature_401_residues
MVNHPIPSQVISRLKKGKASPTAIGGSLVTPFTIVLAVLIGISLFFMAQRFIYGLGAVTNINNGYPWGIWVVWDVVIATG
FACGGYAMALVCYILNRGEYHHLVRPALTASLFGYSLGGASVLIDLGRYWNFWHILWPGYAQPGSVMFEVAACISCYILV
LWIEFSPAFLEHFGFKNLKAKLNKVMFFFIGLGVLLPTMHQSSLGSLLVVFGYQIHPLWQTPLLPLLFLLTAVCMGFAIV
IVEATWAAVGFKRDIHDELPMLSKIGKIIMGILVAYLVIRLGDLVVRGAIFKVFTSGVKSVMFLIEMAVFIYPIVVLSSP
ANRKRLSKLLAAAMSMLTGAILYRIDAFLVAYDTGPGWHYFPSVPEMMVTIGVIAIEVLAYIIFVRKFPILPGHSTPAAA
E

Specific function: Probable b-type cytochrome [H]

COG id: COG5557

COG function: function code C; Polysulphide reductase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrfD family [H]

Homologues:

Organism=Escherichia coli, GI2367183, Length=374, Percent_Identity=45.4545454545455, Blast_Score=335, Evalue=4e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005614 [H]

Pfam domain/function: PF03916 NrfD [H]

EC number: NA

Molecular weight: Translated: 44103; Mature: 44103

Theoretical pI: Translated: 9.57; Mature: 9.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure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CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8021226; 9278503 [H]