| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310744
Identifier: 83310744
GI number: 83310744
Start: 1782889
End: 1783122
Strand: Reverse
Name: 83310744
Synonym: amb1645
Alternate gene names: NA
Gene position: 1783122-1782889 (Counterclockwise)
Preceding gene: 83310745
Following gene: 83310743
Centisome position: 35.9
GC content: 68.38
Gene sequence:
>234_bases ATGTGCATGGCCGTGCCGTCGCGGATCACCGCCATCGACAACGGCGTTGCCACGGTCGAGGCCTTCGGGCAGTCGCGCAC CACCAGCCTGATGCTGCTGGCCGACGAGGTGGTGGTGGGCGATTTCGTCATTCTCGGCCCCGGCGGCACCTTCGCCGCCG AGAAGGTCGAACCCGAGATGGCCGCCGAGACCCTGGCCTATCTCACCGAGGTTCTGGCCGCCGGTCAGGCCTGA
Upstream 100 bases:
>100_bases CCACGCCCACCGTGGCCGCCCGCCTGCCTGAGCTGGTGGAGCGGATCGTCGGTGAACTGGCCGCCATCGGCGTCGCAGTC GGCCGGAAGGCCGCCTGACC
Downstream 100 bases:
>100_bases TGCTCCCCTTCGAGTCCAGCCTGTCCATCACCCTCCATCTCGCCGAAGATCGCGTCGAGACGGTGGAGATCGGATCGAGC CGGCCCGTCCAGGCCTCGGA
Product: hydrogenase maturation factor
Products: NA
Alternate protein names: Hydrogenase Assembly Chaperone HypC/HupF
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MCMAVPSRITAIDNGVATVEAFGQSRTTSLMLLADEVVVGDFVILGPGGTFAAEKVEPEMAAETLAYLTEVLAAGQA
Sequences:
>Translated_77_residues MCMAVPSRITAIDNGVATVEAFGQSRTTSLMLLADEVVVGDFVILGPGGTFAAEKVEPEMAAETLAYLTEVLAAGQA >Mature_77_residues MCMAVPSRITAIDNGVATVEAFGQSRTTSLMLLADEVVVGDFVILGPGGTFAAEKVEPEMAAETLAYLTEVLAAGQA
Specific function: Unknown
COG id: COG0298
COG function: function code O; Hydrogenase maturation factor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7918; Mature: 7918
Theoretical pI: Translated: 3.75; Mature: 3.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCMAVPSRITAIDNGVATVEAFGQSRTTSLMLLADEVVVGDFVILGPGGTFAAEKVEPEM CCCCCCCCEEECCCCCCEEECCCCCCCEEEEEEECCEEECCEEEECCCCCCCCCCCCHHH AAETLAYLTEVLAAGQA HHHHHHHHHHHHHCCCC >Mature Secondary Structure MCMAVPSRITAIDNGVATVEAFGQSRTTSLMLLADEVVVGDFVILGPGGTFAAEKVEPEM CCCCCCCCEEECCCCCCEEECCCCCCCEEEEEEECCEEECCEEEECCCCCCCCCCCCHHH AAETLAYLTEVLAAGQA HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA