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The map label for this gene is hypC [H]

Identifier: 83310739

GI number: 83310739

Start: 1779181

End: 1779417

Strand: Reverse

Name: hypC [H]

Synonym: amb1640

Alternate gene names: 83310739

Gene position: 1779417-1779181 (Counterclockwise)

Preceding gene: 83310740

Following gene: 83310738

Centisome position: 35.82

GC content: 67.51

Gene sequence:

>237_bases
ATGTGCCTTGCCCTCCCCGCCCTGGTCACCGAGCTGTTGCCCGACGATTCGGCCAAGGTCAATCTCGGCGGCGTCGCCAA
GACGGTGTCCCTGGCCCTGGTCAGCGACGTGAAGCCCGGGGATTACGTCATCGTCCACGTGGGCTACGCCCTGTCGGTGA
TCGATCCGGAAGAGGCGGCCCGCACCCTCGAGCTGTTCCGCGAGATGGGCGAACTGGCCGAGGACGTGCCGGCGTGA

Upstream 100 bases:

>100_bases
GGCCATTGACCGCCGCGAAGGTATCGCCGGGCGATGCCGGCCTGTCCCTGGGGCAGGCCTGGATCGCCGCGTTGAGTTGA
GTATCAGAGGAACCAACACC

Downstream 100 bases:

>100_bases
AATACATCGACGAATTTCGCGACGGCGAGGTGGCGCAAAGCATCGCCCAGGCCATCAAGGCCGAGGCCGATCCCGGCTCC
ACCTATCACATCATGGAGTT

Product: hydrogenase maturation factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MCLALPALVTELLPDDSAKVNLGGVAKTVSLALVSDVKPGDYVIVHVGYALSVIDPEEAARTLELFREMGELAEDVPA

Sequences:

>Translated_78_residues
MCLALPALVTELLPDDSAKVNLGGVAKTVSLALVSDVKPGDYVIVHVGYALSVIDPEEAARTLELFREMGELAEDVPA
>Mature_78_residues
MCLALPALVTELLPDDSAKVNLGGVAKTVSLALVSDVKPGDYVIVHVGYALSVIDPEEAARTLELFREMGELAEDVPA

Specific function: May Have A Specific Role In The Maturation Of The Large Subunits Of Hyd1 And Hyd2. [C]

COG id: COG0298

COG function: function code O; Hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hupF/hypC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019812
- InterPro:   IPR001109 [H]

Pfam domain/function: PF01455 HupF_HypC [H]

EC number: NA

Molecular weight: Translated: 8208; Mature: 8208

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLALPALVTELLPDDSAKVNLGGVAKTVSLALVSDVKPGDYVIVHVGYALSVIDPEEAA
CCEEHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEECEEEEEECHHHHH
RTLELFREMGELAEDVPA
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MCLALPALVTELLPDDSAKVNLGGVAKTVSLALVSDVKPGDYVIVHVGYALSVIDPEEAA
CCEEHHHHHHHHCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEEECEEEEEECHHHHH
RTLELFREMGELAEDVPA
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8326860 [H]