| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310607
Identifier: 83310607
GI number: 83310607
Start: 1641625
End: 1642128
Strand: Reverse
Name: 83310607
Synonym: amb1508
Alternate gene names: NA
Gene position: 1642128-1641625 (Counterclockwise)
Preceding gene: 83310609
Following gene: 83310606
Centisome position: 33.06
GC content: 66.67
Gene sequence:
>504_bases ATGAACCGCTCGCCCAAAACCGAAGCCATCTCCAGGAAGGCGAAGATCCGGCCCTCCTGGGTGGATGAGTTCAACCGGCG CCTCGATCTCGCCCTGGCGGAGAGGAAGATGCGGCGGCAGGGGCTGTCCAAGGAGATCGGCATCACCCCCGCCAGCGTCT CCGGATGGAAGAAGGAAAGCGCGCCCAGCCTGGACAACCTGATGACCATCGCCGATCTGCTCGGCGTGTCCGTGGACTGG TTGCTTGGCCGGGGAAGCGATCAGCTTCCCTCGGCCCTGGCGCAGGCGGTGCCCATGGACCGCGACGCCGTCGCCGTCGC CGCCGCCGCCGTGACCGAACTGATCTCAGACTCGCTTAAGCTGCCGGCGGCCGACGACGTCGCCGCCATGGTCCTGCGCA CCCATGATTGGGTGGTGTCCATGCGCCGCCAGGACGGGACATTGCCCGGCATCGCTGACGCAGCCAACTTCCTGCGCCAC GCTCTGCAATTCGCCAAGGACTGA
Upstream 100 bases:
>100_bases TTCATGCCGAGAATATTAGGCACGCCCAAATCTTAGATCAAGCGAAAGATTCGGGCGCATCTGAGATGACCGTAAAATCT TGTCAGGGCACAATCACGCC
Downstream 100 bases:
>100_bases GGCGGCATCCCGCCGCCCGTTTTCGCGCCGCCGCTGCAATCGGTCCACGCATTGACCGCACTCGGACCGGTGCCTGCCCG GCCCGTCGCCGAACAGGATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MNRSPKTEAISRKAKIRPSWVDEFNRRLDLALAERKMRRQGLSKEIGITPASVSGWKKESAPSLDNLMTIADLLGVSVDW LLGRGSDQLPSALAQAVPMDRDAVAVAAAAVTELISDSLKLPAADDVAAMVLRTHDWVVSMRRQDGTLPGIADAANFLRH ALQFAKD
Sequences:
>Translated_167_residues MNRSPKTEAISRKAKIRPSWVDEFNRRLDLALAERKMRRQGLSKEIGITPASVSGWKKESAPSLDNLMTIADLLGVSVDW LLGRGSDQLPSALAQAVPMDRDAVAVAAAAVTELISDSLKLPAADDVAAMVLRTHDWVVSMRRQDGTLPGIADAANFLRH ALQFAKD >Mature_167_residues MNRSPKTEAISRKAKIRPSWVDEFNRRLDLALAERKMRRQGLSKEIGITPASVSGWKKESAPSLDNLMTIADLLGVSVDW LLGRGSDQLPSALAQAVPMDRDAVAVAAAAVTELISDSLKLPAADDVAAMVLRTHDWVVSMRRQDGTLPGIADAANFLRH ALQFAKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18172; Mature: 18172
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSPKTEAISRKAKIRPSWVDEFNRRLDLALAERKMRRQGLSKEIGITPASVSGWKKES CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCC APSLDNLMTIADLLGVSVDWLLGRGSDQLPSALAQAVPMDRDAVAVAAAAVTELISDSLK CCCHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC LPAADDVAAMVLRTHDWVVSMRRQDGTLPGIADAANFLRHALQFAKD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNRSPKTEAISRKAKIRPSWVDEFNRRLDLALAERKMRRQGLSKEIGITPASVSGWKKES CCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCC APSLDNLMTIADLLGVSVDWLLGRGSDQLPSALAQAVPMDRDAVAVAAAAVTELISDSLK CCCHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC LPAADDVAAMVLRTHDWVVSMRRQDGTLPGIADAANFLRHALQFAKD CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA