| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310580
Identifier: 83310580
GI number: 83310580
Start: 1618300
End: 1619169
Strand: Reverse
Name: 83310580
Synonym: amb1481
Alternate gene names: NA
Gene position: 1619169-1618300 (Counterclockwise)
Preceding gene: 83310581
Following gene: 83310579
Centisome position: 32.6
GC content: 71.26
Gene sequence:
>870_bases GTGACCCCGCCCGTTGCCGCCCTGTTGCCCGACGGCAAGCGCCTGCACCTCCAGCACGGCCCCATCGACCTGATCGTCGA GGCCTTCGGCGGCGAGGTGGAGGTGGCGGCAGCCTATGCCCAGGCGGCGGCGGCCTTTCCCGCCCTCCTGCCCCGGCTGG TGGAGGAACTTCCCACCCTGCGGTCGGCCGCTACCCCCAGCATGGCGCTATTCGGCCCGGTGGCCCGGCGCATGCTGGCC GCCGTGCGGCCCCATTGCGCCACCTTCATCACCCCCATGGCGGCGGTGGCGGGCTCCGTGGCCGACGAAATCCTGGCCGC CATGGTCAAGGATCGCCGGCTGGAGCGCGCCTATGTCAACAATGGCGGCGATATCGCGCTGCACCTTACACCCGGCAGCC ATTTCACCGTGGGCATGGTCTCGGACCAGGATCATCCCAGCCTGGACGGGAGGATGACCGTCACCGCCGATCTGCCGGTG CGCGGCATCGCCACCAGCGGACGGGGCGGGCGCTCGTTCTCGCTGGGCATCGCCGATTCGGTCACCGTGCTGGCCCGTGA CGCGGCCGCCGCCGATGCCGCCGCCACCCTGATCGCCAACGCGGTCGATGTGGAGCACCCGGCCATCCGCCGCCAGCCCG CCCGCGATCTGGCCCCCGACAGCGACCTGGGCGAGCGGCTGGTCACCGTGTCGGTCTCTCCCCTTCCCCCCGCCCTGGCC GGTGTCGCCCTGGACGCCGGAACGGCGGTGGCCAAGGCCATGATCGACCGGGGCCTGATCCATGCCGCCTGCCTTTGCCT GCAGGGCCAAACCCGCTTCGCCGGAAGCGGGGAGCTTTCCCAAGACCTGAAAATCGCCATCGGCCAATAA
Upstream 100 bases:
>100_bases TGGAGCAGGTCATCAATCAGGATCGGCGCAAATCGGTGCAATGGGACCCGGACAATCCCTGGCCCATGCTGAAGCGGAAC TACAAGTGGGGGGACGACAC
Downstream 100 bases:
>100_bases GGACACAGCCATGATCGAAGTCCGCAAAATCGTCACCATCAAGGAAGAGATCTTCCATGAAGGCGGTCCCGTGGCCGCCA AGCCGCTGCTGCGCGTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Domain Protein
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTPPVAALLPDGKRLHLQHGPIDLIVEAFGGEVEVAAAYAQAAAAFPALLPRLVEELPTLRSAATPSMALFGPVARRMLA AVRPHCATFITPMAAVAGSVADEILAAMVKDRRLERAYVNNGGDIALHLTPGSHFTVGMVSDQDHPSLDGRMTVTADLPV RGIATSGRGGRSFSLGIADSVTVLARDAAAADAAATLIANAVDVEHPAIRRQPARDLAPDSDLGERLVTVSVSPLPPALA GVALDAGTAVAKAMIDRGLIHAACLCLQGQTRFAGSGELSQDLKIAIGQ
Sequences:
>Translated_289_residues MTPPVAALLPDGKRLHLQHGPIDLIVEAFGGEVEVAAAYAQAAAAFPALLPRLVEELPTLRSAATPSMALFGPVARRMLA AVRPHCATFITPMAAVAGSVADEILAAMVKDRRLERAYVNNGGDIALHLTPGSHFTVGMVSDQDHPSLDGRMTVTADLPV RGIATSGRGGRSFSLGIADSVTVLARDAAAADAAATLIANAVDVEHPAIRRQPARDLAPDSDLGERLVTVSVSPLPPALA GVALDAGTAVAKAMIDRGLIHAACLCLQGQTRFAGSGELSQDLKIAIGQ >Mature_288_residues TPPVAALLPDGKRLHLQHGPIDLIVEAFGGEVEVAAAYAQAAAAFPALLPRLVEELPTLRSAATPSMALFGPVARRMLAA VRPHCATFITPMAAVAGSVADEILAAMVKDRRLERAYVNNGGDIALHLTPGSHFTVGMVSDQDHPSLDGRMTVTADLPVR GIATSGRGGRSFSLGIADSVTVLARDAAAADAAATLIANAVDVEHPAIRRQPARDLAPDSDLGERLVTVSVSPLPPALAG VALDAGTAVAKAMIDRGLIHAACLCLQGQTRFAGSGELSQDLKIAIGQ
Specific function: Unknown
COG id: COG2122
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29757; Mature: 29625
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPVAALLPDGKRLHLQHGPIDLIVEAFGGEVEVAAAYAQAAAAFPALLPRLVEELPTL CCCCCCEECCCCCEEEEECCCCEEHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH RSAATPSMALFGPVARRMLAAVRPHCATFITPMAAVAGSVADEILAAMVKDRRLERAYVN HHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGGDIALHLTPGSHFTVGMVSDQDHPSLDGRMTVTADLPVRGIATSGRGGRSFSLGIADS CCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCEEEECCCCC VTVLARDAAAADAAATLIANAVDVEHPAIRRQPARDLAPDSDLGERLVTVSVSPLPPALA HHEEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHH GVALDAGTAVAKAMIDRGLIHAACLCLQGQTRFAGSGELSQDLKIAIGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure TPPVAALLPDGKRLHLQHGPIDLIVEAFGGEVEVAAAYAQAAAAFPALLPRLVEELPTL CCCCCEECCCCCEEEEECCCCEEHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHH RSAATPSMALFGPVARRMLAAVRPHCATFITPMAAVAGSVADEILAAMVKDRRLERAYVN HHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NGGDIALHLTPGSHFTVGMVSDQDHPSLDGRMTVTADLPVRGIATSGRGGRSFSLGIADS CCCEEEEEEECCCCEEEEEECCCCCCCCCCEEEEEECCCCEEEECCCCCCCEEEECCCCC VTVLARDAAAADAAATLIANAVDVEHPAIRRQPARDLAPDSDLGERLVTVSVSPLPPALA HHEEEHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCEEEEEEECCCCHHHH GVALDAGTAVAKAMIDRGLIHAACLCLQGQTRFAGSGELSQDLKIAIGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA