| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310555
Identifier: 83310555
GI number: 83310555
Start: 1588869
End: 1589618
Strand: Reverse
Name: 83310555
Synonym: amb1456
Alternate gene names: NA
Gene position: 1589618-1588869 (Counterclockwise)
Preceding gene: 83310556
Following gene: 83310552
Centisome position: 32.0
GC content: 63.73
Gene sequence:
>750_bases ATGAGCGGCGGCGCCCCTCCCTTGCGCTTCGCGGGACGAACCGCGGACGAGAATCTGGCCCATGCAATCGAGGCCGTAAA GCTTCGGGTGTTGCCCTCCGGCGCCCTGGATTTTGCCAAGCCGCCGTCGCGAAGCGAATGGTATCTGCTGGTCCGCTCGG CTCCCGATCTGCGCTGTCAGGAATATAACGCCTTCCTCTTCCGCCATGCCTATGCGGGAACCACCGTGCCGCGGGGCTGT GGCGAGTGCTATAAGATCAAGATCGTTCCTCCGGATTTACGTGCCCTGGTGGCGCTGCGCAGTCTTCTCGAATCCCTGAC CGGCCCCTGCAAATGTGGCGTCGACTTCTACAACCCGCATTCGCGCGATTTCTACGCCGGGTTCTTCTATTATGACGGCC TAAATGCCGCCCGTGCCGATTATCCTGCCCTGCGCGCCGCCATCGACGCCCAGCCCCATCTCGGCCCCGACGTCCCGATG ATCATCAAGCGCGGCTGCTCCAATTACGAGGCGGCGTGCGGGCCGTCCGACCGCTGGACCTTTCCCGAGGGCATGGCGGA ACTGGAAGCCGGTCTTCGGGCACGCTTCCAGCCCACCATCCCCGCCCCCGCCGATTACCGGCTGCGGCGGATGACGGCCA TGGTCCATTGGATCAAGTTCGCCTACTGGATCAAGGACGACTCCTATCTGGACTTCACCGGCGGCAAGCCGCTCCATCCG CCGACCGTGGGCTATTCACCCGACACATAG
Upstream 100 bases:
>100_bases CGATACCGGCCTATCATGGCGCATGGACTGGCGGCAAGCGGGGGACAGTTTGGAAACCGCCTGAAACGCGCTATCATCGC GCCGCAGAACGGAGAATGCG
Downstream 100 bases:
>100_bases CCGAGGCGCCGCATCATCGCCCCGTGGGCGGCAACGATGCGGGCCGCCTGCCGGGGGGTCAAGACCTCGTTCCAGGCTCC CGCCCGCCCCTGGCGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MSGGAPPLRFAGRTADENLAHAIEAVKLRVLPSGALDFAKPPSRSEWYLLVRSAPDLRCQEYNAFLFRHAYAGTTVPRGC GECYKIKIVPPDLRALVALRSLLESLTGPCKCGVDFYNPHSRDFYAGFFYYDGLNAARADYPALRAAIDAQPHLGPDVPM IIKRGCSNYEAACGPSDRWTFPEGMAELEAGLRARFQPTIPAPADYRLRRMTAMVHWIKFAYWIKDDSYLDFTGGKPLHP PTVGYSPDT
Sequences:
>Translated_249_residues MSGGAPPLRFAGRTADENLAHAIEAVKLRVLPSGALDFAKPPSRSEWYLLVRSAPDLRCQEYNAFLFRHAYAGTTVPRGC GECYKIKIVPPDLRALVALRSLLESLTGPCKCGVDFYNPHSRDFYAGFFYYDGLNAARADYPALRAAIDAQPHLGPDVPM IIKRGCSNYEAACGPSDRWTFPEGMAELEAGLRARFQPTIPAPADYRLRRMTAMVHWIKFAYWIKDDSYLDFTGGKPLHP PTVGYSPDT >Mature_248_residues SGGAPPLRFAGRTADENLAHAIEAVKLRVLPSGALDFAKPPSRSEWYLLVRSAPDLRCQEYNAFLFRHAYAGTTVPRGCG ECYKIKIVPPDLRALVALRSLLESLTGPCKCGVDFYNPHSRDFYAGFFYYDGLNAARADYPALRAAIDAQPHLGPDVPMI IKRGCSNYEAACGPSDRWTFPEGMAELEAGLRARFQPTIPAPADYRLRRMTAMVHWIKFAYWIKDDSYLDFTGGKPLHPP TVGYSPDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27666; Mature: 27535
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGGAPPLRFAGRTADENLAHAIEAVKLRVLPSGALDFAKPPSRSEWYLLVRSAPDLRCQ CCCCCCCCEECCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHH EYNAFLFRHAYAGTTVPRGCGECYKIKIVPPDLRALVALRSLLESLTGPCKCGVDFYNPH HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEECCCCCCCCC SRDFYAGFFYYDGLNAARADYPALRAAIDAQPHLGPDVPMIIKRGCSNYEAACGPSDRWT CCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC FPEGMAELEAGLRARFQPTIPAPADYRLRRMTAMVHWIKFAYWIKDDSYLDFTGGKPLHP CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCC PTVGYSPDT CCCCCCCCC >Mature Secondary Structure SGGAPPLRFAGRTADENLAHAIEAVKLRVLPSGALDFAKPPSRSEWYLLVRSAPDLRCQ CCCCCCCEECCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEEECCCCCCHH EYNAFLFRHAYAGTTVPRGCGECYKIKIVPPDLRALVALRSLLESLTGPCKCGVDFYNPH HHHHHHHHHHHCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCEECCCCCCCCC SRDFYAGFFYYDGLNAARADYPALRAAIDAQPHLGPDVPMIIKRGCSNYEAACGPSDRWT CCCEEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC FPEGMAELEAGLRARFQPTIPAPADYRLRRMTAMVHWIKFAYWIKDDSYLDFTGGKPLHP CCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCC PTVGYSPDT CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA