| Definition | Magnetospirillum magneticum AMB-1 chromosome, complete genome. |
|---|---|
| Accession | NC_007626 |
| Length | 4,967,148 |
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The map label for this gene is 83310508
Identifier: 83310508
GI number: 83310508
Start: 1533158
End: 1533850
Strand: Reverse
Name: 83310508
Synonym: amb1409
Alternate gene names: NA
Gene position: 1533850-1533158 (Counterclockwise)
Preceding gene: 83310510
Following gene: 83310496
Centisome position: 30.88
GC content: 69.55
Gene sequence:
>693_bases ATGATCCGCCTTTTTCCAATCCTGGCCGCCCTGCCCTTGCTATGCGGCCTCCATGCCAGCCCGGCCGCGGCCGAGAATCG CCTGATCCTCTACACGGTCGGCGCGGGCGTCCCCGAGGCCCCTCCCCCGGTGCTGGCCCGCTTCCGCGACCAGGGCTGGA CGATCCGCATCAATCGGGTGCCGGTGGATTTCCGCCGCGAGCACGATTTCGGCAAGGCCCTGTTCGACCAGGCCCGGGCG GCGCGGGGCGAAGGCTATTCCCGGGTGGTGCTGGCCGGGCGCTCCTTCGGCGCCTGGGTGTCGCTGATCGCCAATTCCTC GTGGTCGACGCCGGTGGATGGCGGCGGCATCCATGCGGTGATCGCCCTGGACGCCACGGTCAGCGCCGAGACGGCCCGCC ATGGCCGCCAGTGGCACGACTACAAGTTCATGGACGTGATCAAGACCCAGGACCCCACCCGCCTCGGGGTGATGGTCCTG GACGGCGATGCCGAGGAAGGCCGTGGCCGCGAGGATGAGATCCGCCGCACCCTCCGCCGCCCCGGCATTCCCCATGTGGT GGTCTACGAACCGGCGCCGCCCCCCCTGGACAGCGAGGACTTCGCCCGGCGCTGGGGAGATTGCCTCGCCACCCTGCTGG GCGACGAGGTTCCCTCACCGCCGGCTAATGACTGGTGCCGCTTGAATAATTGA
Upstream 100 bases:
>100_bases GTGAATCGTCCATCTGTATCAGAATGGTGGAGAAACGTCACCTGCCCCGACTGGATGCGGGCGATAGGCTGGCGTCAGCC GGCCGTGTCATGGTGCATCC
Downstream 100 bases:
>100_bases TCTTGTTGAAGACGTTGTACTTGCCCACCGGCCGTTTCATGGGCATGCGGGTCACCACCTCGAAGCTTTCGGCGTCGAAG ACGATCAGCTCGCCCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MIRLFPILAALPLLCGLHASPAAAENRLILYTVGAGVPEAPPPVLARFRDQGWTIRINRVPVDFRREHDFGKALFDQARA ARGEGYSRVVLAGRSFGAWVSLIANSSWSTPVDGGGIHAVIALDATVSAETARHGRQWHDYKFMDVIKTQDPTRLGVMVL DGDAEEGRGREDEIRRTLRRPGIPHVVVYEPAPPPLDSEDFARRWGDCLATLLGDEVPSPPANDWCRLNN
Sequences:
>Translated_230_residues MIRLFPILAALPLLCGLHASPAAAENRLILYTVGAGVPEAPPPVLARFRDQGWTIRINRVPVDFRREHDFGKALFDQARA ARGEGYSRVVLAGRSFGAWVSLIANSSWSTPVDGGGIHAVIALDATVSAETARHGRQWHDYKFMDVIKTQDPTRLGVMVL DGDAEEGRGREDEIRRTLRRPGIPHVVVYEPAPPPLDSEDFARRWGDCLATLLGDEVPSPPANDWCRLNN >Mature_230_residues MIRLFPILAALPLLCGLHASPAAAENRLILYTVGAGVPEAPPPVLARFRDQGWTIRINRVPVDFRREHDFGKALFDQARA ARGEGYSRVVLAGRSFGAWVSLIANSSWSTPVDGGGIHAVIALDATVSAETARHGRQWHDYKFMDVIKTQDPTRLGVMVL DGDAEEGRGREDEIRRTLRRPGIPHVVVYEPAPPPLDSEDFARRWGDCLATLLGDEVPSPPANDWCRLNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25348; Mature: 25348
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRLFPILAALPLLCGLHASPAAAENRLILYTVGAGVPEAPPPVLARFRDQGWTIRINRV CEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCEEEEECC PVDFRREHDFGKALFDQARAARGEGYSRVVLAGRSFGAWVSLIANSSWSTPVDGGGIHAV CCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEE IALDATVSAETARHGRQWHDYKFMDVIKTQDPTRLGVMVLDGDAEEGRGREDEIRRTLRR EEEECCCCHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHC PGIPHVVVYEPAPPPLDSEDFARRWGDCLATLLGDEVPSPPANDWCRLNN CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC >Mature Secondary Structure MIRLFPILAALPLLCGLHASPAAAENRLILYTVGAGVPEAPPPVLARFRDQGWTIRINRV CEEHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHCCCCCEEEEECC PVDFRREHDFGKALFDQARAARGEGYSRVVLAGRSFGAWVSLIANSSWSTPVDGGGIHAV CCHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCCCCCCCCCEEEE IALDATVSAETARHGRQWHDYKFMDVIKTQDPTRLGVMVLDGDAEEGRGREDEIRRTLRR EEEECCCCHHHHHCCCCCCCCHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHC PGIPHVVVYEPAPPPLDSEDFARRWGDCLATLLGDEVPSPPANDWCRLNN CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA